Coregonus clupeaformis (lake whitefish): 121578203
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Entry
121578203 CDS
T08357
Name
(RefSeq) protein kinase C delta type isoform X1
KO
K06068
novel protein kinase C delta type [EC:
2.7.11.13
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04140
Autophagy - animal
cclu04270
Vascular smooth muscle contraction
cclu04621
NOD-like receptor signaling pathway
cclu04625
C-type lectin receptor signaling pathway
cclu04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121578203
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121578203
04625 C-type lectin receptor signaling pathway
121578203
09152 Endocrine system
04912 GnRH signaling pathway
121578203
09153 Circulatory system
04270 Vascular smooth muscle contraction
121578203
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cclu01001
]
121578203
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.13 protein kinase C
121578203
Protein kinases [BR:
cclu01001
]
Serine/threonine kinases: AGC group
PKC family [OT]
121578203
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PKC_C2
PK_Tyr_Ser-Thr
C1_1
Pkinase_C
zf-RING-like
Kinase-like
C1_2
ABC1
PHD
Tap-RNA_bind
RH_dom
PHDvar_NSD
APH
FtrD-like
Motif
Other DBs
NCBI-GeneID:
121578203
NCBI-ProteinID:
XP_041748334
LinkDB
All DBs
Position
12:40759125..40799450
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AA seq
686 aa
AA seq
DB search
MEPFLRIAFNAFDVGVLPPLTNTPFCAIKMKESFITERGKTLVQRKPTMYPAWKSSFDAH
ILEGRVLQVVLMKTTEEPLAEATVGMSVLAERCKKGNGCAEFWVDLQPSGKVQMAVQFFV
EDTDTAAAFKSTVKGREEEDGARTLYRRKAIKQAKVHYIKNHEFTATFFGQPTFCSVCRE
FVWGLNKQGYKCRQCNAAIHKKCIDKIIGRCTGTAANSRDTMFQKERFKIDMPHRFKSHN
YMSPTFCDHCGSMLWGMVKQGIKCEDCSMNIHHKCQKKVGNLCGINQKLLSEALNQVSQK
SISRSESNNSKSTDTGIYQDFNKSPGVDPSEANENLWEGGKVPAPTSIAPKIHLTIDNFV
FHKVLGKGSFGKVLLAELKGRGEYFAVKALKKDVVLMDDDVECTLVEKRVLALAWDNPFL
THLYSTFQTREHLFFVMEYLNGGDLMFHIQDKGRFDLYRATFYSAEIVIGLQFLHSKGII
YRDLKLDNVMLDRDGHIKIADFGMCKENMFGANRATTFCGTPDYIAPEILLGQKYTFSVD
WWSFGVLVYEMLIGQSPFQGDDEEELFESIRMDVPHYPGWITKEAKDLLEKLFERDPSHR
LGVVGNIHGHSFFKTLNWPALEKREVEPPFKPKVKAPNDCSNFDREFLREKPRLSHTDKN
LIDSMDQAVFAGFSFINPKMECIMDS
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggagcccttcctgcgcatagcctttaatgcatttgatgtgggggtcctgccccccctg
actaacactcccttctgtgccattaagatgaaggagtccttcatcactgagcgggggaag
accctggtccagaggaaacccactatgtacccagcctggaagtccagttttgacgcccac
atcttggagggccgtgtcctgcaggtggttctgatgaagaccacagaggagccattggcc
gaggccacggtgggcatgtccgtgctggccgagcgctgtaagaagggcaacggctgtgct
gaattctgggtagacctgcagccttctgggaaggttcaaatggctgtccagttctttgtg
gaggacacagacacagcagcagcgtttaaatcgacagtgaaggggcgtgaagaggaggac
ggggcgagaacactgtaccgaaggaaagccattaaacaggccaaggtccactacatcaag
aaccatgaattcactgccaccttctttggacagcccaccttctgctctgtctgcagggag
tttgtctggggactcaacaagcaaggctacaagtgccgacaatgcaatgcggctatccac
aagaaatgcatcgacaaaatcattgggagatgcaccggaacagcagccaacagtagagac
actatgttccagaaggagcgctttaagatcgacatgccgcatcgcttcaagagccacaac
tacatgagccccaccttctgtgaccactgtggcagtatgctgtggggaatggtcaagcag
ggcatcaagtgtgaagattgttccatgaacatccatcacaagtgtcagaagaaagtgggc
aatctctgtggaatcaaccagaaacttctgtctgaggccctcaaccaagttagccagaaa
tccataagtaggtctgaatccaacaactccaagtcaacagacactggaatctaccaggac
ttcaacaaaagcccaggagtggaccctagtgaagccaatgagaacctgtgggaaggtggt
aaggtccctgcccccaccagcatcgctcccaagatccacctcaccatcgacaactttgtg
ttccacaaggtgctgggcaagggcagctttggcaaggtcctgctggctgagctgaagggg
cgaggggaatactttgctgtgaaggccctgaagaaagatgtggttctgatggatgatgat
gtagagtgtaccttggtggagaagagagtcctggccctggcctgggacaaccccttcctc
acacacctttactccaccttccagactagggaacacctgtttttcgtgatggagtacctg
aatggaggagacctgatgttccacatacaggataagggtcgctttgacctctacagagcc
acgttctactcagcagagatcgtaattggactgcagtttctccattccaaaggaattatt
tacagggacctgaagctggacaatgtgatgctggacagggacggccacattaagattgct
gactttggaatgtgcaaggagaacatgtttggagcgaatcgggccaccactttctgtggg
acgccggactacatcgcaccagagatcctgctgggacagaagtacaccttctccgtggac
tggtggtcgtttggggtgctggtgtatgagatgctgattggccagtcgccgttccagggt
gatgacgaggaagagctgtttgagtccatcaggatggacgtgcctcactaccctggctgg
atcaccaaggaggccaaggacctgctggagaagctgtttgaacgagaccccagtcacaga
ctaggggtggtggggaacatccatggacactccttcttcaagaccctcaattggcctgcc
ctggagaagagagaggtggaaccccccttcaaacctaaagtgaaagccccgaatgactgc
agcaactttgaccgggagttcctgcgtgagaagccccgcctgtcccacacagacaagaac
ctgattgactctatggaccaggctgtctttgcaggcttctctttcatcaaccccaagatg
gaatgcattatggacagttga
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