Coregonus clupeaformis (lake whitefish): 121578917
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Entry
121578917 CDS
T08357
Name
(RefSeq) LOW QUALITY PROTEIN: dedicator of cytokinesis protein 1
KO
K13708
dedicator of cytokinesis protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04148
Efferocytosis
cclu04510
Focal adhesion
cclu04810
Regulation of actin cytoskeleton
cclu05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121578917
09144 Cellular community - eukaryotes
04510 Focal adhesion
121578917
09142 Cell motility
04810 Regulation of actin cytoskeleton
121578917
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121578917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cclu04131
]
121578917
Membrane trafficking [BR:
cclu04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121578917
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_DOCK
DHR-2_Lobe_C
DHR-2_Lobe_A
DHR-2_Lobe_B
Motif
Other DBs
NCBI-GeneID:
121578917
NCBI-ProteinID:
XP_045063584
LinkDB
All DBs
Position
26:49784275..49956872
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AA seq
963 aa
AA seq
DB search
MTTGSFVASMTATLRQMDDYHYTHLINTFGKMRTDVVDFLMETFIMFKDLIGKNVYPGDW
VIMNMMQNKVFLRAINQYAAVLNKKFLDQTNFELQLWNNYFHLAVAYLTQESLQLENFSS
DKRAKIFQTYQDMRRQIGFEIRDMWYNLGPHKIKLIPEMVGPILEMTLVPEIELRKATIP
IFFDMMQCEFHFTSSFQRFENEIITKLDHEVEGGGGDEQYKVLFQKILLEHCRKHKYLSK
SGEIFVSLVVRLLERLLDYRTIMHDENKENRMSCTVNVLNFYKEIEREEMYIRYLYKLCD
LHKECDNYTEAAYTLLLHAKLLKWSEEACAAHLTQREGYQASTQGQLKDQLYQEIINYFD
KGKMWEEAIVLGKELADQYENEMFDFEQLSASLRKQAQFYENIVKVIRPKPDYFAVGYYG
VGFPSFLRNKMFIYRGKEYERREDFEARLLTQFPNADKMKTTTPPGDDIKNSPSQCVQCF
TVKPVLELPPKFQNKPVSEQIVSFYMINEVYQFQYSRPVRKGEKDPDNEFSNMWIERTTY
TTAYKLPGILRWFEVKSVSTEEISPLENAMETMQLTNEKISNMVQRHLNDSNLPINPLSM
LLNGIVDPAVMGGFTNYEKAFFTEKYQKDHPEDQEKLGKLKDLIAWQIPYLADGVRIHGE
KVTEALRPFHDRLEACFKQLREKVEKQYGVKTLPAVDDRRGSRPRSMVRSFTMPSQQRPL
SVASVNSVSSDNSPSRPGSDGFALEPLLPKKLHCKSQDKLERDESERERKDKKKEKRNSK
HQEIFDKELKTTEILLQPAEAVILSETISPLRPQRPKSQVLNLLSGDRRLSVSPGPPQPQ
SSPGPPPITPRNKLSFSLHTVSICVQEAWGVQEAELVFRRRGVFRRRSLCSGGGACVQEA
GGVQEAELVFRRRGVFRRRSLCSGGGGVQEAELVFRTNEIFSFSKHILKLPCDIIVSTEQ
AEI
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgggcagcttcgtggccagcatgacagctacactgagacagatggacgactac
cactacactcacctgatcaacaccttcggcaagatgaggacagacgttgtggatttcctg
atggaaacatttatcatgttcaaggacctcattgggaagaatgtctaccctggcgactgg
gtcatcatgaacatgatgcagaataaagtgttcctgagggccattaatcagtatgcagcc
gtgttaaacaagaagttcctggatcagaccaactttgagctgcagctgtggaacaactac
ttccaccttgccgtggcgtatcttacccaggagtccttgcagcttgagaacttctccagc
gacaaacgagccaagatcttccagacgtaccaggacatgagaagacagattggctttgag
atcagagacatgtggtataacctaggtccccacaagatcaagttgatcccagagatggtg
ggtcccatcctagagatgactctggtccccgagatagaactgaggaaagccacaatcccc
atcttcttcgacatgatgcagtgtgaattccacttcacctccagcttccaacggtttgag
aatgagatcatcaccaaactggatcatgaggtggaggggggcggaggagatgagcagtac
aaagtcctcttccaaaagattctgttggagcactgcaggaaacataagtacctgtctaag
agtggggagatctttgtgagcttggtggttcgtctgttggagcgactgctggactacagg
accatcatgcacgatgagaacaaggagaaccggatgagctgcactgtcaacgtgctgaac
ttctacaaggagatagagagagaggagatgtacatcaggtacctgtacaagctgtgtgat
ctccacaaggagtgtgacaactacactgaagctgcctacacactgctgctgcacgctaag
ctgctcaagtggtctgaagaggcgtgtgcagctcacctcacccagagagaaggctaccag
gcctctacacaaggacaactcaaggaccagctctaccaggagattatcaactacttcgac
aagggcaagatgtgggaggaagccatcgtactagggaaggagctggcagaccagtatgag
aatgagatgtttgactttgagcagctcagtgcatccttgcggaagcaggcccagttctat
gagaacattgtgaaggtgatccggcccaagccagactactttgctgtgggctactatgga
gtgggcttcccttccttcctcaggaacaagatgttcatctacagggggaaggagtacgag
aggagagaggactttgaggccagactgctcacccagttccccaacgctgacaagatgaag
actaccacaccacccggcgatgacatcaagaactctccctcacagtgcgtccagtgtttc
accgtgaagcctgttctggaacttcctccaaagttccagaacaaaccagtctctgagcag
atcgtcagcttctacatgataaacgaggtgtatcagtttcagtactccagaccggtgagg
aagggtgagaaggacccagacaatgagttctcgaacatgtggattgagcggaccacttac
accacggcctacaaactgcctggcatcctgcgatggtttgaagtcaagtctgtctccacg
gaggagatcagcccattggagaatgccatggagacaatgcaactgaccaatgagaagatc
agcaacatggtgcagcgtcacctgaatgactccaaccttcccatcaaccccctctccatg
ctgctcaacggcattgtggaccccgctgtcatgggtggcttcaccaactacgagaaggcg
ttcttcacagagaagtaccaaaaggatcaccctgaggaccaggagaaactgggcaaactg
aaagacctcattgcttggcagatcccttacctggctgatggagttcgtatccatggagag
aaagtgactgaggctctgaggcctttccatgaccgtctggaggcctgcttcaaacagctc
cgagagaaagtggagaaacagtacggagtcaagacactgcctgcggtggatgacaggcgt
gggtcccgtcctcgctctatggtgcgttccttcaccatgccctcacaacagagaccgctc
tctgtggcttcagtcaactccgtctcctctgacaactcaccctccagacctggctcagac
ggctttgccctagagcctctcctgccaaagaagctgcactgtaagtcccaggacaagctg
gagcgcgacgagtcggagagggagaggaaggacaagaagaaggagaagaggaacagtaag
caccaggagatcttcgacaaggagctgaagaccactgagatcctcctgcagcccgccgag
gcagtcatactgtcagagacgatcagcccactgaggcctcagagaccaaagagtcaggtg
ttgaacctgttgagtggagaccgccgtctctctgtgtcccccggacccccccagccccag
tcctccccgggccccccacccatcacccccaggaacaaactgtccttcagcctacacacc
gtttccatttgtgttcaggaggcgtggggtgttcaggaggcggagcttgtgttcaggagg
cgtggggtgttcaggaggcggagcttgtgttcaggaggcggagcttgtgttcaggaggca
gggggtgttcaggaggcggagcttgtgttcaggaggcggggggtgttcaggaggcggagc
ttgtgttcaggaggcgggggtgttcaggaggcggagcttgtgttcagaaccaatgagatc
ttttccttcagtaaacacatcctcaaacttccctgtgacatcatcgtgtctacagaacag
gcagaaatatga
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