Coregonus clupeaformis (lake whitefish): 121579388
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Entry
121579388 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM37 isoform X2
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121579388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121579388
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121579388
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121579388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
zf-B_box
MATH
zf-C3HC4_3
HTH_1
zf-C3HC4_2
HlyD_2
MRFAP1
Motif
Other DBs
NCBI-GeneID:
121579388
NCBI-ProteinID:
XP_041749887
LinkDB
All DBs
Position
13:complement(18058244..18110097)
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AA seq
962 aa
AA seq
DB search
MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
RELVNCRWAEEVTQQLDTLQLCNLSKHEENDKDKCENHHEKLSVFCWTCKKCICHQCALW
GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRVAKDERVR
EIRNAVEMMIARLDNQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
SPEILLMFQQVHRKPMQSFVTTPVPPDFTSELVPAYDSSTFVLANFSTLRQRADPVYSPP
LQISGICWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQASSDPTKNII
REFASDFEVGECWGYNRFFRLDLLASEGYLNMQTDTVVLRYQVRSPTFFQKCRDQYWYIS
QLESAQSSYIQQINNLKERLAIELFRRQKSRSSSPPDQRLCPSTSERDSRSGKGPVAEDG
CQTTATETKEEEEEEKTQHDDSNELSDGDLEGDCLTGDEEVNPLDGSSTSGSSTATSNTE
ENDIDEETMSGENDVEFSGNLEMEEGELPDDVAGAAGGSNPGARCLRRGGGGGGLSSAGS
NNSLLEIDPVILIQLLDLKEHSSVESLWGLQPRPPASLLHSQVQVHSRKERGERRPQAVR
RGAPDSGVLIRLKAQMAEVRSKMTDVKCQLEARGEARAGPSGGATGEQGPSYHADSGLGP
SRKPTELDLMGKGPGASRHCRSGEKKALSPKQEGSGLGLRRATDGVEKEPRGQSGEESSS
DQCLFPRDTSNGSEGALKPRSAHSSPPSLGSSSSCSDNKPCSSKHDQEQLYGANLYALGG
LNGISTATMARPRTQPMGAGLLTDSSLDCDLEETAEIRQSLLSLAEGPSSRPDESHVVRK
QTVVLLPGMSSDSEIDCDTENEDEVVGLEAGDCRYDARALPCAGAQLISDDLSFTTGENT
ER
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggatgaacaaagtgttgagagtattgcggaggtgttccgctgtttcatctgtatggag
aagctgcgggacgctcggctctgcccccactgctccaaactctgctgcttcagctgcata
cggcgctggttgactgagcagagagcccaatgcccacactgtcgggcaccactgcagctg
cgggagctggtgaactgccgctgggctgaagaggttacccagcagctggacaccctgcag
ctctgcaacctctccaaacacgaggagaacgacaaggacaagtgtgagaaccaccatgag
aagctcagtgtgttctgctggacctgtaagaagtgcatctgccaccagtgtgctctgtgg
ggaggcatgcatggcggccacaccttcaagcctctggctgagatctacgagcagcacgtg
accaaggtgaacgaggaggtggccaagctccgccgccgcctcatggagctcatcagcctg
gtgcaggaagtggaaaggaatgtggaagcagtgcgagtggccaaagacgagcgagtgcga
gagatccgtaatgcagtagagatgatgattgcccgtctggacaaccagctcaaaaacaaa
ctcatcaccctcatgggtcagaagacctccctcacccaagagactgagctactggagtct
ctcctgcaagaggtggaacatcagctgcgctcctgcagtaagagcgagttgatctccaag
agtccagagatcctgctcatgttccagcaggttcaccgcaagcccatgcagtcctttgtc
accactccagtccccccagacttcaccagtgagctggttcctgcctatgactcaagcact
tttgttctggcaaacttcagcaccctgagacagagggcagatcccgtctacagcccacca
ctccagatatctggcatctgctggagactcaaggtttacccagatggcaatggtgtggtg
cgtggcaactatctgtcagttttcttggaactatctgcaggactccctgaaacgtcaaaa
tatgagtaccgtgtggagatggtccatcaggcctccagcgaccccactaagaacatcatc
agggagtttgcatcagactttgaggtgggggagtgctggggctacaaccgcttcttcaga
ctggacctgctggctagcgagggctacctcaacatgcagactgacacagtggtcctcagg
tatcaggtgcgttcgcccaccttcttccagaagtgcagagaccagtactggtacattagc
cagctggagtcagcccagtccagctacatccagcagatcaacaacctcaaagagaggctg
gccattgagctgttccgtaggcaaaagtctcgcagctcgtcccctcctgaccagcgcctg
tgcccctcgacctcagagagagactcccgctcagggaaaggccccgtggctgaggatggc
tgccagaccactgccaccgagaccaaagaggaagaggaggaggagaagacccagcacgat
gactccaatgagctgtctgatggggacttggaaggggactgtctgacgggggacgaggag
gtcaaccctctggatggtagcagcacctcgggcagctccacggcaaccagcaacacagag
gagaacgacatcgacgaggagaccatgtctggggagaatgatgtggagttcagtgggaac
ctggaaatggaggagggagaactgcctgacgatgtggcaggggcagcaggaggctctaac
cctggggccaggtgtctgaggcgtggtggtggtggtggtggtctttcctccgctggcagc
aacaacagtctgctggagatcgaccccgtcatcctcatccagctgctggacttgaaggaa
cacagcagcgtggagtcactatggggccttcagcccagaccccctgcttccctgttgcac
agccaagtccaagtccactccaggaaggagcggggtgagcgccggcctcaggcagtgagg
aggggagccccagactcaggggtcctgatccggctcaaggcccagatggctgaggtgcgc
agtaagatgacggatgtcaagtgtcagctggaggcgcggggggaggccagggcaggaccc
tccggtggggccacaggggagcaggggccctcttaccacgcagactcaggcctagggccc
agcagaaagcccacagagcttgatctgatggggaaaggacctggggcctccagacactgt
cgctctggagagaagaaggccttgtctcccaagcaggagggcagcgggctgggcctgagg
agagccacagacggagtggagaaggagccgagaggccagagcggtgaagagtcgtccagc
gatcaatgcctcttccccagggacacctccaacggatcagaaggagccctgaagccacgc
agcgcccacagctcccctccctctctgggcagctcatcgtcctgctccgacaacaagccc
tgcagctccaaacacgaccaggagcagctctacggggccaacctgtacgctctggggggc
ctcaatggcatctccaccgccaccatggcacgacccaggacccagcccatgggggccggc
ctgctgacggacagctctctggactgtgacttggaggagacggctgagatccgccagtca
ctgctctccctggcagagggaccctcttcacgccctgacgaaagtcatgttgtccgtaag
cagacggtggtgttgctgccaggtatgagcagtgacagtgagatcgactgtgacacggag
aacgaggacgaggtggtgggcctggaggctggagactgtcgctatgatgcccgggctctg
ccctgcgcaggggcccagttgatctctgatgacctgagcttcaccacaggagagaacaca
gagaggtga
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