Coregonus clupeaformis (lake whitefish): 121579719
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Entry
121579719 CDS
T08357
Symbol
fbn1
Name
(RefSeq) LOW QUALITY PROTEIN: fibrillin-1
KO
K06825
fibrillin 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04350
TGF-beta signaling pathway
cclu04518
Integrin signaling
cclu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121579719 (fbn1)
09133 Signaling molecules and interaction
04518 Integrin signaling
121579719 (fbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121579719 (fbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cclu00536
]
121579719 (fbn1)
Glycosaminoglycan binding proteins [BR:
cclu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121579719 (fbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_CA
cEGF
hEGF
EGF
FXa_inhibition
TB
EGF_3
Fibrillin_U_N
Plasmod_Pvs28
EGF_FBN_1st
EGF_PEAR1L
EGF_MSP1_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
121579719
NCBI-ProteinID:
XP_045079481
LinkDB
All DBs
Position
1
Genome browser
AA seq
2751 aa
AA seq
DB search
MCRGRLVRLAVGLVAVLSLWTEPGGAEAEAGAGQAGGTGGEATLTEGELVSLPLLTVDSE
PARQTPTQPRASRAKRRGGGTDVLKGPNVCGSRFNAYCCPGWKTLTGGNQCIVPICRSSC
GDGFCSRPNMCTCPTGSIAPSCGSKSVQNCNIRCMNGGSCAEDHCQCQKGYVGNHCGQPV
CETGCQNGGRCVAPNRCVCTYGFTGAQCERDYRTGPCFASVSNQMCQGQLTGIVCTKTLC
CATVGRAWGHPCEMCPAQPHPCRRGFIPNHRTGACQDVDECQAIPGLCQGGNCINTVGSF
ECKCPAGHKFNEITQKCEDLDECSNIPGLCSGGECSNTVGSYFCRCPQGYYTPVDGSRCI
DARGGYCYASLLNGRCANQNSQLLTKIQCCCDSGRCWSDGSNPELCPMTGTDEHQKLCTQ
VQTGPGGGPLPGGGGPLPGGGGEIPGGPQVPGINLRPPYPGVPIPFQPPPREGLYPGPII
IQSQNISTSITNMCEVYRNLCLNGRCVPTPGSYRCDCNMGFRLDSRGECIDDDECERNPC
VNGECVNTAGSYFCQCPAGFQSTATRTECRDLDECVTNGRICNNGRCVNTEGSFHCVCNA
GFDISTDGKNCQDMDECLIRNMCLNGMCMNEEGSFKCICKPGFLLNPTGRFCVDIDECET
PGMCMNGHCVNTEGSFRCECMAGLAVGLDGRVCVDTHMRSTCYGGYKRGQSVKPFFGAVT
KSECCCASVEYAFGEPGQPCPPQSSAEFLALCINGPGVTSDGRDINECALDPDICQNGVC
ENMLRTYKCNCNMGFEVDTTGKNCVDIDECAVNRLLCDNGLCRNTPGSFTCHCPTGFLFH
AETDVCEDVDECESKPCVNGDCKNSPGSYACLCSAGSTLDASKTQCIETSKGTCWLKVIN
GRCEININGATLRSHCCSTLGEAWGSPCAKCEPDQFCTKGYARVRGTICEDVNECEVFPG
VCINGKCVNTVGSFICQCPSGMTVDATGRTCIDLRTEQCYLSHEDERCGAPIPGRHRVDA
CCCSVGVAWGPECDECPEKGSQEYSQLCPRGPGFANRGDFINGRPFLKDINECKMIHSLC
SNGKCRNTIGSFRCRCDNGFALDSDERNCTDIDECRISPDLCGQGTCVNTGGDFECECFE
GYESGFMMMKNCMDIDECERNPLLCRGGECVNNEGSFQCVCPDGHEIAPDGSACLDINEC
ELSEKLCRNGQCVNMIGRYQCSCDTGYKSTENRLACVDIDECTIQNGGCETFCTNSEGSY
ECSCRSGYALMPDLRTCTDIDECEDSPDVCDGGQCTNIPGEYQCLCFDGFMSSEDMKTCL
DVDECELNPNICLSGNCENSKGSFICHCDKGYSVRKGTTGCTDINECEIGAHNCDRHASC
TNTAGSFKCSCAPGWIGDGIKCTDLDECSNGTHMCSNNADCLNTMGSYRCHCKDGFSGDG
FYCSDSDECADNVNLCESGNCLNVPGGYRCECDMGFIPTPDGKACEDIDECTFADICVNG
RCQNIPGLFRCQCSIGYELDRSGGNCTDINECADPTTCISGLCVNTPGSYICNCPQDFEL
NPTRVGCVDTRSGDCYLDVRMRGDASESLVCSNEIGVAVSKASCCCSLGQAWGTPCEACP
PLNSSEYKTLCPGGEGFRPNPITVILEDINECQELPGLCQGGHCINTFGSFQCECPKGFQ
LNEENRVCEDVNECERPGICGPGQCYNTIGNYTCICPVDYMQVNGGNNCMDMRKSFCYRN
FYSDNGTCDGELTFNMTKKMCCCSYNIGRAWNRPCEQCPVPSTNEFAILCGSERPGYYID
IYTGQVIDIDECREIPGVCENGVCINMIGSFRCECPMGFLYNDKLLICEDIDECQNGPVC
QQNAGCLNMPGSYRCECKPGYRFTPTGQCLDRNECVENPGVCSPGQCIDTLGSYRCICPN
GFKATSDLAMCIDVDECERQPCGNGTCKNTVGSYNCLCYPGFQLSHNNDCIDTDECSSQR
GLCRNGNCINTLGSFVCVCRDGYELSADGRICVDINECAVNPGTCGPGTCQNLDGSYRCI
CPLGYYIQDETCEDIDECSQTPDICLFGTCSNTEGSFTCVCPAGFQLSSSGRRCVDVRVN
YCYTKFESRRCMAPKPLNTTKADCCCSAMPGQGWGDPCEICPGKNEEAFMSLCHAVGQVF
GPDDQPIDIDECTTNPNICNNGQCINTDGSFRCECPFGFRLDTSGINCEDTNECDLGNPC
GNGTCTNVIGAFECACDEGFEPGPMMSCEDVNECSQNPLLCAFRCVNVIGSYECKCPTGY
VLREDKRMCKDQNECEDGLDDCESRGMRCKNLIGTYMCICNPGYTRAPNGEGCIDLNECS
AKPGICENGRCENTVGSYRCRCDQGFSANPTQTECIDNRQGLCFTEVLTTLCQMQSSSRN
SVTKSECCCDGGRGWGSNCELCPLPGTTQYKKMCPLGPGYTTDGKDIDECRVMGNLCVNG
QCVNSLGSYSCVCKTGYTTDITGTLCVDMDECVQAPKPCNFICKDTEGSYLCSCPRGYIL
QEDGKSCRDLDECQSKQHNCQFLCVNTIGGFTCKCPPGFTQHHTACIDNNECASDPALCG
SNGVCQNSPGSFNCECTRGFSMDPNGQSCEDMDECDGNHRCQHGCQNLVGGYRCSCPQGY
LQHYQWNQCVDENECQNTQICGGASCHNTLGSFRCLCPTGFNYGDQGGCSDINECSSSSN
PCNYGCSNTDGGYLCGCPPGYYRAGQGHCVSGVGFGSGVSLGQGGGGGGGG
NT seq
8254 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcgggggcggctggtgaggctggcggtgggtctggtggcggtcctgtcgctgtgg
acggagcctggcggggctgaggctgaggctggggctgggcaggctgggggaaccggagga
gaagctacacttaccgaaggagagctggtgtctttgccgttattaacggtagacagcgag
ccggccagacagacaccgacccaaccaagagccagccgggccaagcggaggggaggaggg
acagacgtcctcaaagggcctaatgtgtgtggctctcgtttcaacgcctactgctgtcca
ggatggaaaactctgaccgggggcaaccagtgcatcgtccccatctgtcggagctcgtgt
ggagacggtttctgctccagacccaacatgtgtacctgtcccaccggatccatcgctcct
tcttgtggatccaagtcagtccaaaactgtaacatccgctgtatgaacggtgggagctgt
gctgaggaccactgccagtgtcagaaaggatacgtgggaaaccactgtggtcaaccggtg
tgtgagacaggttgtcagaatggaggacggtgtgtggctcctaaccgctgtgtttgtacc
tacggcttcacgggggcacagtgtgagagagactaccgtacagggccgtgctttgcatcc
gtgagtaaccagatgtgccagggccagctgacgggcatcgtgtgtaccaagacgctgtgc
tgtgccaccgtggggagggcatggggacacccctgtgagatgtgccccgcccagcctcac
ccctgcaggagaggatttatacccaaccatcgcaccggggcctgccaagatgtggatgag
tgccaggccatcccaggtctgtgtcagggtggtaactgtatcaacactgttggatcattc
gagtgtaagtgtcctgctggacacaagttcaacgagatcacacagaaatgtgaagatcta
gatgagtgttctaacatcccaggcttgtgtagtggaggagagtgttccaacacggtgggc
agttacttctgcaggtgtcctcagggctactacactccagtggatggctccaggtgtata
gatgcacggggtgggtactgctatgccagcctgctgaacgggcgttgtgccaaccagaac
tcccagctgctgaccaagatacagtgctgctgtgacagcgggcgctgctggtcagacgga
tccaatcccgagttgtgccccatgacggggactgatgagcaccagaagctgtgcacacag
gtgcagaccggtccagggggggggcctctcccaggtgggggggggcctctcccaggcggg
ggaggggaaataccaggaggtccccaggtcccaggtatcaacctaagaccaccctaccca
ggcgtaccaatccctttccagcctccgcctagagaaggtctataccctggacccatcatc
atccagagccagaacatcagtaccagcattactaacatgtgtgaggtgtacaggaacctg
tgtctgaacggccgctgtgtccccacccctggaagctaccgctgtgactgtaacatgggc
ttcagactagactcacgaggagagtgtatcgatgatgatgagtgtgagcggaacccgtgt
gtgaacggagagtgtgtgaacacggctggatcctacttctgccagtgtcctgctggcttc
cagtccactgctaccaggacagagtgcagagacctggatgagtgtgtgaccaacggtcgt
atctgtaacaacggaaggtgtgtgaacactgaggggagcttccactgtgtttgcaacgcc
ggctttgacatctctactgatggaaagaactgtcaagacatggatgagtgtctgatcagg
aacatgtgtttgaatgggatgtgcatgaacgaagagggaagctttaaatgtatctgtaaa
cctggcttcctgctcaacccaaccggacgcttttgtgtagacattgatgagtgtgagact
ccagggatgtgtatgaacggccactgtgtgaacacggaggggtcgttcaggtgtgagtgt
atggctggtttggctgtgggtctggatggacgcgtctgtgtcgacacacatatgcgcagc
acgtgttacggaggctacaagcggggacagagtgtgaagccattcttcggagccgtgacc
aagtcagagtgctgctgtgccagcgtggagtacgcctttggagagcccggccaaccatgc
ccgccccaaagctcagctgagttcctggctctgtgtattaacggccccggcgtcaccagc
gatggcagagatatcaatgagtgtgctctggacccggacatctgtcagaacggtgtgtgt
gaaaacatgctgaggacctataagtgtaactgcaacatgggcttcgaggtggacaccact
ggcaaaaactgtgttgacatagatgagtgtgcagtgaacaggctactgtgtgacaacggc
ctgtgcaggaacactccaggtagtttcacctgccactgtcccaccggcttcctgttccac
gctgagacggatgtctgcgaagacgttgatgagtgtgagtcgaagccgtgtgtgaacggg
gactgtaagaacagcccggggtcctacgcgtgtctctgctcagcaggcagcacgctggac
gcctctaaaacacagtgtatagagaccagtaaaggcacatgttggctgaaggtgattaac
ggacgctgtgagatcaacatcaacggagccactctgagatcccactgctgctccacactg
ggagaggcctggggaagcccctgtgccaagtgtgaaccagatcagttctgcactaagggt
tatgccagagtcagagggaccatctgtgaagatgttaatgagtgtgaggtgtttccgggg
gtgtgtatcaatgggaagtgtgtgaacaccgtgggctccttcatctgccagtgtccctct
gggatgactgtcgacgccaccggacggacatgtatagacctgcgtacggagcagtgttat
ctgagccacgaggatgaacgttgcggagcccctatcccgggtcgtcaccgtgtggatgcg
tgctgctgctcggtgggtgtggcctggggcccggaatgtgacgagtgtccggagaaaggc
tctcaggagtacagccagctctgtcccaggggacccggcttcgctaacagaggagacttc
attaacggacggcccttcctcaaagatataaacgagtgtaagatgatccacagcttgtgc
tccaatgggaagtgtaggaacaccatcggtagtttccgttgtcgctgtgacaacggcttc
gctctggactctgatgagaggaactgtacagacatcgacgagtgccgtatctctccagac
ctgtgcggtcagggcacatgtgtgaacacgggtggggacttcgagtgtgaatgttttgaa
ggttacgagagcggcttcatgatgatgaagaactgcatggacattgatgagtgtgagcgg
aaccctctgctgtgtcgcggtggtgagtgtgtgaacaatgagggtagcttccagtgtgtg
tgtcccgacggacacgagatcgcccccgacggatccgcctgtctcgatattaatgagtgt
gaactgagtgagaagctgtgtcgaaacggtcagtgtgtgaatatgattggacgctaccag
tgttcgtgtgatactggatacaaatccacagagaacagactggcctgtgtcgacattgat
gagtgtacgatccagaacggaggttgtgagacattctgtaccaactcagaggggagctat
gagtgcagctgtcgctctggatacgccctgatgccagacctcaggacctgcactgacatc
gatgagtgtgaggacagtccagacgtctgtgacggaggccagtgtaccaacattccagga
gagtaccagtgtctctgcttcgatggattcatgtcttctgaagatatgaagacctgtctg
gatgtggatgagtgtgagctgaaccctaacatctgtctgagtgggaactgtgaaaatagc
aagggatcctttatctgccactgtgacaagggctactccgtacgcaagggaaccaccggc
tgcacagatattaatgagtgtgagatcggggcccataactgtgacagacatgcctcatgc
accaacacggctggcagcttcaagtgtagctgtgctccgggatggattggagacgggatc
aaatgcacagacctggatgagtgttccaacgggacccacatgtgcagcaacaacgcagac
tgtctgaacaccatgggatcctaccgctgccactgcaaagacggattctctggggacggc
ttctactgctcagacagcgatgaatgtgcggataacgtgaacctgtgtgagagcggcaac
tgtctgaatgttcctggaggctaccgctgcgagtgtgacatgggcttcatcccaaccccg
gacggaaaagcctgcgaggacatagacgagtgtacatttgccgatatctgtgtgaatgga
aggtgtcagaacattccggggctgttcaggtgtcagtgtagcatcggctatgagctggac
aggagtggaggcaactgcacagacattaatgagtgtgctgacccgaccacctgtatcagt
gggctgtgtgtcaacaccccaggtagctacatctgtaactgtcctcaagacttcgaactc
aaccccacacgcgtgggttgcgtagacactcgttctggtgactgctatctggacgtgcgg
atgcggggggatgcgtctgagagtttggtctgttccaatgagatcggtgtggcggtgtcc
aaagcctcctgctgctgttctctagggcaggcctggggaacaccctgcgaagcctgccct
cctctcaactcctcggagtacaagacgttgtgtcctggaggagagggattcagacctaac
cccatcactgtcatactggaagacatcaatgagtgccaggagctgccaggcctgtgtcaa
ggaggacactgcatcaacaccttcggtagcttccagtgtgaatgtcccaaaggcttccaa
ctcaacgaggagaacagagtctgtgaagatgttaatgagtgtgagcgtccaggtatctgt
ggaccaggccagtgttacaacaccataggaaactacacctgtatctgccctgtggactac
atgcaggtcaatggaggaaacaactgtatggacatgaggaagagtttctgctacaggaac
ttctactctgacaacgggacgtgtgacggagagttgaccttcaacatgaccaagaagatg
tgctgctgctcctacaacatcggacgggcctggaacagaccctgtgaacagtgtcctgta
cccagcaccaatgagtttgccattctgtgtggaagtgagagaccaggatactacattgat
atctacacaggacaggtcatcgacatcgatgagtgcagggaaatcccaggtgtgtgtgag
aacggcgtgtgtatcaacatgattggcagcttcaggtgtgagtgtccaatgggcttcctg
tacaatgacaagctgcttatctgtgaagacattgatgagtgtcagaatgggccagtgtgc
cagcagaatgcaggctgtctcaacatgcctggtagttaccgctgtgaatgtaaacctgga
taccgcttcacccccactggacagtgtctggatcgtaatgagtgtgtggagaacccagga
gtgtgtagtccaggccagtgtattgatacgttgggaagctatcgctgtatctgccccaat
ggtttcaaggctacatcagacctggccatgtgtatcgatgtggatgagtgtgagagacag
ccgtgtgggaacggcacctgtaagaacacagtgggatcctataactgcctgtgttaccct
ggctttcagctctcacacaacaatgactgcatagatactgatgagtgttcgagccaaaga
gggctgtgtagaaacgggaactgtattaacaccctgggctccttcgtgtgtgtgtgtcgc
gacggctacgaactcagcgccgacggaagaatttgtgttgacatcaatgagtgtgcagtg
aaccctgggacttgtggtccaggcacctgtcagaatctggacggctcctacaggtgtatc
tgcccacttggctactacatacaggacgagacctgtgaagatattgatgagtgttctcag
accccagacatctgtctgtttgggacctgctccaacactgaaggcagcttcacctgtgtg
tgtcctgccggctttcagctgtcctcctcaggacgcagatgcgtggatgtccgtgtgaac
tactgttatactaagtttgagagtcgtcgctgcatggcccctaagcctctgaacaccact
aaagcggactgttgctgtagtgccatgcctggtcagggctggggagacccctgtgagatc
tgccccggcaagaatgaggaggcgtttatgtctctctgccatgcggttggacaggtgttt
ggccctgatgaccagcccatagacattgatgagtgcaccaccaaccccaacatctgcaat
aacggtcagtgtatcaacacggacgggtcgttccgatgtgagtgtccatttggcttccga
ctcgacacctcagggatcaactgtgaagatactaatgagtgtgacctggggaacccatgt
ggaaacggaacgtgcactaacgtgattggagcgtttgagtgtgcatgtgatgaaggcttc
gaacccggacccatgatgtcttgtgaagatgtgaacgagtgttcacagaatcctttgctg
tgtgcgttccgctgcgtgaacgtgattggttcctatgagtgtaaatgtccgacgggctac
gtgctgcgagaggacaagagaatgtgcaaagaccagaatgagtgtgaggatgggctggat
gactgtgagagcagagggatgcgctgtaagaacctcatcggaacctacatgtgtatctgt
aaccctggttacacacgcgcccctaacggagagggctgtatagatctgaatgagtgctct
gctaagccaggtatctgtgagaacggtcgttgtgagaacacggttggaagctatcgctgc
aggtgtgaccaaggcttcagcgccaaccctacacagactgaatgtatagataaccgccag
ggcctgtgtttcacggaggtgttgactacattgtgccagatgcagtccagtagcaggaac
agtgtgactaagtctgagtgttgctgtgatggaggacgaggctggggctctaactgtgag
ctgtgtcctctacctgggaccacacagtacaaaaagatgtgtccactggggcccggatac
acaacagacggcaaagacatagatgagtgtcgtgtgatggggaacctgtgtgtgaacgga
cagtgtgtcaacagcctgggctcctacagctgtgtgtgtaaaactggatacaccacagat
atcactggcaccctgtgtgtggatatggatgagtgtgtgcaggctcctaagccgtgtaac
ttcatctgtaaggacacagagggaagctacctctgttcctgtccccgaggatacatacta
caggaggacggcaagagctgtcgagatctggatgagtgtcagagcaaacagcacaactgt
cagttcctgtgtgtgaacaccattggaggattcacctgcaaatgtcctccaggcttcacc
cagcaccatactgcctgcatagataataatgaatgtgcgtcggaccctgctctgtgtggt
tcgaatggagtgtgtcagaacagcccaggcagcttcaactgcgagtgtactagaggattc
tcaatggaccccaatggacagagctgtgaagatatggatgagtgtgatggtaaccatcgt
tgtcaacatggctgtcagaacctggtgggagggtacaggtgtagctgtcctcagggatac
ctacaacactatcaatggaaccagtgtgtcgatgagaacgagtgccagaacactcagatc
tgtgggggagcgtcgtgtcataacaccctagggagcttccgctgcctctgtcccactggg
ttcaactacggagaccagggggggtgtagtgacatcaacgagtgctcctcgtcctctaat
ccatgtaactacggctgttccaacacagacggagggtatctctgtggctgtccgcctgga
tactatcgcgctggacaggggcactgtgtgtcaggtgtgggctttggtagcggtgtgagt
ctgggccagggaggaggaggaggaggaggaggag
DBGET
integrated database retrieval system
