Coregonus clupeaformis (lake whitefish): 121579795
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Entry
121579795 CDS
T08357
Name
(RefSeq) collagenase 3
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121579795
Peptidases and inhibitors [BR:
cclu01002
]
Metallo peptidases
Family M10
121579795
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Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_4
Reprolysin_5
Reprolysin_3
DUF4953
Peptidase_M54
Peptidase_M66
Metallopep
Motif
Other DBs
NCBI-GeneID:
121579795
NCBI-ProteinID:
XP_041750631
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Position
13:24743240..24748348
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AA seq
473 aa
AA seq
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MKTFILCLLLVNLAIVVYSLPISPPTEEDEVLAETYLKRFFNLTEETGPTARRGPSQRSR
KVSEMQTFFGLQVTGTLDAETVTMMKKPRCGVPDVQPSRFTTFDNRKWQTNQVTYRIENY
TPDMSVAEVDNSIERALQVWAKVSPLRFTRIYSGTADIMISFGTRNHGDSYPFDGPDGTL
AHAFSPGPDIEGDAHFDDDEYFTFSSTRGYNLFLVAAHELGHSLGLSHSNDPGALMYPVY
SYTDPSTFSLPRDDVNGIQYIYGPNPDVNPNPDKPDPTPPSTPDACDPTLVLDAVTTLRG
EKMFFKGRFFWRSYSQSSTPQQNLIKTFWPGLPDNINAAYESQLSDRVFLFKDRQVWALS
GYDIVPGYPKNLNSLGLPSTVKKVDAALYDVDSRKSLFFVGDYYYSYDEEMKRMDKGFPK
RVDEGFPGMTSKVTAAFQVRSFTYLYSGSYVFEYSMRTRRQLRVLGNSYFLPC
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaagactttcattctgtgcttactactagtcaacctggcaatagtggtttactctttg
ccaatatcgccgcctactgaagaagatgaagttcttgcagagacgtacctgaagagattt
tttaacctgacagaggagacgggtcctacggccagacgggggcccagccagcggagcagg
aaggtcagcgagatgcaaacgttctttggcctccaggtgacaggcaccttggacgctgag
accgtgacgatgatgaagaagccacgctgtggcgtacctgatgtccaacccagccgcttc
accaccttcgacaatcgcaagtggcagaccaaccaggttacctacaggattgagaactac
acccctgacatgtctgtggctgaggtggacaactccatagagagagcactacaggtgtgg
gccaaggtctcccccctgaggttcacccgcatctacagcggcaccgctgacatcatgatc
tccttcggcaccagaaatcatggtgattcttaccccttcgatggcccggatggcaccctg
gcccatgccttctcgcctggtcctgacattgaaggagatgctcattttgacgatgacgag
tacttcaccttcagctcaaccagagggtacaacctgttcttggtggctgcacatgagctt
ggccattccctcggtctcagccactccaacgaccctggagcactaatgtacccagtgtac
agctacacagaccccagcaccttctctctgcctcgcgatgacgtcaacggtatccagtac
atctatggtccaaacccagatgtgaaccccaacccagacaagccagatcctacaccccct
tccacccctgatgcctgtgatcccaccctggttctggatgctgtcaccactctgcgtggg
gagaagatgttcttcaagggcaggttcttctggcgtagctactctcagagcagcacacca
cagcagaacctcatcaagaccttctggcccggactccccgacaacatcaatgctgcttac
gagagccagctatctgacagagtgttcctcttcaaagatcgtcaggtctgggctctctcc
ggctatgacatcgtccccggctatcccaaaaacctgaacagcttgggtctgcccagtacc
gtgaaaaaagtagatgccgccctgtacgatgtagattctcgcaagagcttgttctttgtt
ggtgactactactacagttacgatgaggaaatgaaaaggatggacaaaggtttccccaag
cgtgtggatgaagggttcccaggcatgacaagcaaagtgactgcagccttccaagtccga
agcttcacctacctttatagtggctcctacgtgtttgagtacagcatgaggaccaggaga
cagttacgcgtgctaggaaacagctacttcctgccctgttag
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