Coregonus clupeaformis (lake whitefish): 121579924
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Entry
121579924 CDS
T08357
Name
(RefSeq) E3 ubiquitin-protein ligase RNF128 isoform X1
KO
K10629
E3 ubiquitin-protein ligase RNF128 [EC:
2.3.2.27
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121579924
Enzymes [BR:
cclu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121579924
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121579924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
zf-RING_16
zf_RING_Vps8_fungal
zinc_ribbon_16
zf-Nse
Motif
Other DBs
NCBI-GeneID:
121579924
NCBI-ProteinID:
XP_041750857
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All DBs
Position
13:complement(36253807..36306890)
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AA seq
411 aa
AA seq
DB search
MIRKTGLDSTTGVASVFERKMGKRGTHCFGLVFFTLLCLITAQNTGANMVFWMATIQTRY
WNTSDNKTVLQSCECGLYGAHSPVTSASGEVTLPISDPLACGPQTSFNSSEPWIALIQRG
NCTFAEKILAAAESGAAGVVIYNLPGTGNEEIPMMHHGTGDMVAIMISHRRGMEIVELIR
QGIPVSMTIEVGKQHGPWMSHYSVFFISISFFVVTSATVGYFIFNSARRLNSVRLQNLKQ
KQLKAEAKKAIGQLQVRTVKQGDEETGPDADTCAVCIDAYKSGDVLTMLTCNHFFHKTCI
EPWLLEHRTCPMCKCDILMALGVEQPEVDQPSHQLTMQPNTRSYPRVPVSEDTRSETASS
GYASVQGTEEPSSPAEDTHMYETLGRHPGPGSIQVDIVQPHYDNLAFEGNS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggaagacagggcttgactcaactacaggcgttgcgagtgtgtttgagaggaaa
atggggaagagaggcacacattgctttggcttggtctttttcacattgctctgcctgata
actgctcaaaatactggggcgaacatggtattttggatggctaccattcaaacgcgttac
tggaacacaagtgacaacaaaacggtgttacaaagctgtgagtgtggattatatggggcc
cactctcctgtcacctcggcttccggagaggtgacgcttcctatttcagatcccttagcc
tgtgggccccagactagctttaatagctcagagccatggatagcccttattcagagggga
aactgcaccttcgctgagaagatcctggctgctgctgaaagtggagccgctggtgtggtt
atttacaacctccctggtacaggcaatgaggaaatccccatgatgcaccacggaacagga
gatatggttgccatcatgattagtcacagacggggcatggaaattgttgagctgatcagg
caagggattccagtctcgatgaccattgaggtgggcaagcagcatggtccctggatgagc
cactactctgtgttcttcatctccatctccttcttcgtggtaacatcagccactgtgggc
tacttcatcttcaactcggctcgccgcctcaacagtgttcgtctacaaaacctcaaacag
aaacagctcaaggcagaggccaagaaagctattggtcagctgcaagtccggaccgtgaaa
cagggagatgaggagactgggcctgatgctgacacctgtgcagtgtgtattgacgcttac
aagtctggcgacgtgctgaccatgctcacctgcaatcatttcttccataaaacctgcatt
gagccctggctattggagcacaggacctgccccatgtgtaaatgtgacatcctcatggcc
ttgggagtagagcagccggaggtggaccagcccagtcatcagttgaccatgcagccaaac
acaaggtcctaccccagggtcccagtctcagaggacacccggagtgagacagcctcctca
ggctatgcctctgtacagggtacagaggagcccagcagcccagcagaagatacacacatg
tatgaaacgttggggcgccatcctggcccagggtcaatccaggtggacatcgtccagccc
cattatgacaaccttgcctttgagggcaactcatga
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