Coregonus clupeaformis (lake whitefish): 121580921
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Entry
121580921 CDS
T08357
Symbol
b4galt2
Name
(RefSeq) beta-1,4-galactosyltransferase 2 isoform X1
KO
K07967
beta-1,4-galactosyltransferase 2 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00052
Galactose metabolism
cclu00510
N-Glycan biosynthesis
cclu00513
Various types of N-glycan biosynthesis
cclu00514
Other types of O-glycan biosynthesis
cclu00515
Mannose type O-glycan biosynthesis
cclu00533
Glycosaminoglycan biosynthesis - keratan sulfate
cclu00601
Glycosphingolipid biosynthesis - lacto and neolacto series
cclu01100
Metabolic pathways
Module
cclu_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
cclu_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
121580921 (b4galt2)
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
121580921 (b4galt2)
00513 Various types of N-glycan biosynthesis
121580921 (b4galt2)
00515 Mannose type O-glycan biosynthesis
121580921 (b4galt2)
00514 Other types of O-glycan biosynthesis
121580921 (b4galt2)
00533 Glycosaminoglycan biosynthesis - keratan sulfate
121580921 (b4galt2)
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
121580921 (b4galt2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121580921 (b4galt2)
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
121580921 (b4galt2)
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
121580921 (b4galt2)
2.4.1.90 N-acetyllactosamine synthase
121580921 (b4galt2)
Glycosyltransferases [BR:
cclu01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
121580921 (b4galt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
121580921
NCBI-ProteinID:
XP_041752052
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All DBs
Position
14:complement(38830471..38992122)
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AA seq
376 aa
AA seq
DB search
MTRLMLGRTLERICKAVLLLCLVHFVIMMILYFDVYSQRFDQIFSRFNNGRNASRNGHHY
YYNLSRPNATFTSYLATADQLLPSVRPEGNHTPPTTKPIPPCPEIPPGLVGRLLIEFASQ
MTMERVQKENPNVTEGGKYTPPDCRAKQKVAIIIPFRHRDNHLKYWLHYLHPILRRQKID
YAIYIITQLGEDTFNRAKLLNVGYTEALKDAEYDCFIFSDVDLIPMDDRNLYHCYDQPRH
FAIAMDKFGFRLPYAGYFGGVSGLSKKQFLKINGFPNEYWGWGGEDDDIYNRITLNGMKV
VRPDVRIGRYRMIKHERDKHNEPNPQRFNKIQNTKNTMKRDGISTLTYRVVQFKKYPLYT
NISVEIGKPPPRPFRG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgactcggctgatgttgggccggaccctggagcgcatctgcaaggctgtcctgctgctc
tgcctggtgcactttgtcatcatgatgatcctctacttcgacgtctacagccagcgcttc
gaccagatcttcagccgcttcaacaacggccgcaacgccagccgcaacggacaccactac
tactacaacctcagccggcccaatgcaaccttcaccagctacctggccaccgcagaccag
ctgctgcccagtgtacgacccgagggaaaccacacgccgccaactaccaaacctatacca
ccatgcccggagataccccctggtctggtgggccgcctcctcatcgagtttgcctcccag
atgacaatggaacgggtgcagaaggagaacccaaatgtgacggaggggggcaagtacacc
ccgccggactgccgtgccaaacagaaggtggctatcattatcccattcagacacagagac
aaccacctcaagtactggttgcactacctgcaccccatccttcgacggcagaagatcgac
tatgccatctatatcatcacccagcttggtgaggacactttcaacagagccaagctcctg
aatgtgggctacacagaggccctgaaggatgcagagtacgactgctttatcttcagcgac
gtggatctcatccctatggacgaccgtaacctctaccactgttacgaccagccacgacac
ttcgccatcgctatggacaagtttggcttcaggcttccttatgcggggtactttggcggg
gtttccgggctgagcaaaaaacagtttctcaagatcaatggcttccccaacgagtactgg
ggctggggaggagaagatgacgacatctataacaggatcaccctcaacgggatgaaggtg
gttcgaccggatgtccggattggccgctacaggatgatcaaacacgaaagagacaaacac
aatgaacccaacccacaaagattcaacaagatccagaacaccaagaacactatgaagaga
gacgggatcagcacgttaacgtaccgcgtggtccagtttaagaagtaccctctctacacc
aacatctctgtggagatcggcaagcccccgccccggcctttcaggggctag
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