Coregonus clupeaformis (lake whitefish): 121581069
Help
Entry
121581069 CDS
T08357
Name
(RefSeq) matrix metalloproteinase-16-like isoform X1
KO
K07996
matrix metalloproteinase-16 (membrane-inserted) [EC:3.4.24.-]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cclu01002
]
121581069
Peptidases and inhibitors [BR:
cclu01002
]
Metallo peptidases
Family M10
121581069
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
DUF3377
PG_binding_1
Metallopep
Peptidase_M66
Peptidase_M54
DUF4953
Reprolysin_3
Motif
Other DBs
NCBI-GeneID:
121581069
NCBI-ProteinID:
XP_045080828
LinkDB
All DBs
Position
14:complement(27520894..27571183)
Genome browser
AA seq
627 aa
AA seq
DB search
MTLVSSSKRKPLDCFYAAVFCLHFLLWIVCVVSGEEHHQFSVEGWLQKYGYLPHTDPRMA
VLRSTQTMQQAIAAMQGVYGLNVTGTLDERTTDDITLSWMKKPRCGNPDKLKGNSRSRKR
RYALTGQKWQRTHITYSIKNVTPKVGSRETHDAIRRAFDVWQGVTPLHFEAVPYSALESG
RRDVDITIIFASGFHGDSSPFDGEGGFLAHAYFPGPGIGGDTHFDSDEPWTLGNPNHDGN
DLFLVAVHELGHALGLEHSNDPTAIMAPFYQYMDTENFKLPHDDLQGIQKIYGTVPTGPP
DRALQPTRAPPTAPPPRFHPPLEPRKHDRQVRPHRPPQGAKPSNPYAKPNICDGGFNTVA
ILRQELFVFKDQWFWRVRDNSVVPGYPMQINYFLKGLPAKIDAVYENSEGKFVFFKGNRF
WVFKDTTLQPTYPQDISLFGSGMPTQSIETAVWWEDVAKTYFFKGDRYWRYNEEMRNMDP
GYPKPITVWKGIPDSPQGAFVDKANGFTYFYKGKEYWKFNNQRLRVEPGYPRSILRDFMG
CDGLPADPDWDWSPPEVEERHSDSSNGDVDIVIKLDSTGGTENAVAIAIPCILALCMMVL
LYTVFQFRRKSTQRHILYCKRSMQEWV
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaccttagtatcctcatctaaaagaaaaccattggattgtttttacgcagcagtgttc
tgcttgcatttcttgctgtggattgtatgcgttgtgtccggagaagagcatcatcagttc
agcgttgagggatggctacagaagtatggctacctgccccacacagaccccagaatggct
gtcctgcgctcaacacagaccatgcagcaagccatcgcagcaatgcagggcgtctacggc
ctcaatgtcacagggacactggatgagaggaccacagatgatatcacactaagttggatg
aagaagccgaggtgtggaaatccagacaaactaaagggcaactcaaggtcgcggaagcgg
aggtacgcgctgaccgggcagaagtggcagcgaacacacatcacttacagcataaagaac
gtcacgcccaaagtgggctccagggagacccacgatgccatccggcgtgcgtttgacgtg
tggcagggagtgacaccgctccacttcgaggccgtcccctacagcgccctggagagcggc
aggcgggacgtggacatcaccatcatcttcgcctcaggtttccacggtgacagctcaccc
ttcgatggcgagggggggttcctagcccacgcctactttccgggccctgggatcggaggg
gacacccacttcgactcagacgaaccctggaccctggggaaccccaaccacgatggtaat
gacctgttcctggtggcagtccatgagctgggccacgccctgggtctggaacactccaat
gaccccacagccatcatggctccattctaccagtacatggacacagagaacttcaaactt
cctcacgacgaccttcagggcatccagaaaatatatggtactgtacctacaggtccacca
gacagggctctccagcccaccagggctccacccacggcccctcccccacgcttccacccc
cccttggaaccccgtaagcacgaccgccaggtccggccccaccgccctcctcagggcgcc
aaaccctccaacccctacgccaaacccaacatctgtgacggaggcttcaacaccgtggcc
atcctcagacaggagctgttcgtattcaaggaccagtggttctggagggtgagggacaac
tcagtggtccctggctaccccatgcagatcaactacttcttgaaaggcctgcctgccaag
atcgacgccgtctatgaaaacagcgaagggaagtttgtcttcttcaaagggaaccgcttc
tgggtgttcaaggacactactctgcaacccacctaccctcaggatatctctctgtttgga
agtgggatgcccacccagagtatagagaccgctgtgtggtgggaggatgtggcaaagaca
tacttcttcaagggagacagatattggaggtacaatgaagagatgaggaacatggaccct
ggttaccccaaacccattacggtgtggaagggcatccctgactcccctcagggggcgttt
gtggacaaggccaacggattcacctacttctacaaggggaaggagtactggaagttcaac
aaccagcggttgcgtgtggagccgggctacccccgctccatcctgagggacttcatgggc
tgcgacggcctgccggccgaccccgactgggactggagccccccagaggtggaggagcgc
cactccgatagcagcaacggtgacgtggacatcgtcatcaagctggacagcacggggggc
acagagaatgctgtggctatcgccatcccctgcatcctggcgctgtgcatgatggtcctg
ctctacaccgtgttccagttcaggaggaagagcacgcagagacacatactgtactgcaag
cgctctatgcaggagtgggtgtga
DBGET
integrated database retrieval system
