Coregonus clupeaformis (lake whitefish): 121581527
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Entry
121581527 CDS
T08357
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1-like
KO
K20894
shank-associated RH domain-interacting protein
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04217
Necroptosis
cclu04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
121581527
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121581527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121581527
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
121581527
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
121581527
NCBI-ProteinID:
XP_041752958
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Position
14:complement(31433301..31436428)
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AA seq
443 aa
AA seq
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MALSSGGWGKTPVPAASQAVHGGPALANCNTVLMSVRVSVCHSGIRPLCLPGAGDEALRL
QLSMDPSKAGEFRLALRDNSGSGRSVFIAEFDLRSVQYEVKSPRLHEMRLATPPHDCVRF
NFHCDREAEQWATVVMSSLREAHRVAANSSPHPMDDRQQHTAAEALEQRSTASLPLTEEL
CLELARAIEAGDSQAAAQHASALARQKAVLTIQLSEKSYTEGEISLSVAVEDISSSCCVT
VKVFPHMTVAALKQQVFLEYGFHPRVQRWVIGQCLCTEPRSLASYGIQRDGDTAYLYLVS
ARHARLTRQLFQQDQEGAHHTPPPPPSNGPVSQDWRGYSTLPSRLSHNTQGSIGTGAERL
GMSEIRDALNLETLQLNDKPDKPSKASKTQTEWACPSCTFINKPTRPGCEICSTARPDSR
KQSSIQQEKGRREEQGEIGALSS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcactgagctccggcggttggggtaaaacgcctgtgcctgccgcgtcccaggctgta
catggcgggcccgcgctggctaactgcaacaccgttttgatgtcggtacgggtgtcggtt
tgccattcgggtattcgaccgctttgcctccctggagctggcgatgaggctctccgtctt
caacttagcatggaccccagcaaggctggagagtttcggctagcactgagggacaatagc
ggaagcggccgtagtgtgttcattgcagagtttgacctgcgctctgtgcagtatgaggtc
aagtccccacgccttcacgagatgcgcttggccacgccccctcacgactgtgtccgcttc
aacttccactgcgaccgggaggctgaacagtgggccaccgtcgtgatgtcatcactaaga
gaggcacacagagttgctgcaaatagttccccacatcctatggatgaccgacagcagcac
acagcagcagaagctctagaacagcgcagcactgcctccttaccactcactgaggagctg
tgcttggagcttgcccgggcgatcgaggcaggtgacagccaggctgctgctcaacatgcg
tctgctctggctcgtcagaaggcagtgctcactatccaactgtctgagaagagttacaca
gaaggagagataagtttgtctgtggcagtggaggacatctcctcttcctgttgcgtaaca
gtgaaagtatttccccacatgaccgtcgcagcactcaagcagcaggtgtttttggagtat
ggctttcaccctcgcgtgcagcgctgggtgattggacaatgcctgtgcacagagcctagg
tccctggcctcatatgggatccagagggatggggatacggcctacctctacctggtctca
gctcgccatgcccgcctcacccgccagctattccagcaggaccaggagggtgcccaccac
acccctcccccaccccccagcaatgggcctgtgtcccaggactggaggggctacagcacc
ctgccctccaggctcagccacaacacccaggggagcattggaactggggccgagaggttg
ggtatgagcgagatccgagacgccctcaacctggagacgctgcagctaaacgataaacct
gataagcccagcaaagccagtaaaacacagacagaatgggcgtgtccctcctgcaccttc
atcaacaagcctacccgaccaggctgtgagatctgcagtacagccagacctgactcacgc
aagcaaagcagcatacaacaggagaaaggaagaagagaggagcagggggagatcggtgca
ttgagcagttga
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