Coregonus clupeaformis (lake whitefish): 121581559
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Entry
121581559 CDS
T08357
Name
(RefSeq) C-X-C chemokine receptor type 4-like
KO
K04189
C-X-C chemokine receptor type 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03250
Viral life cycle - HIV-1
cclu03260
Virion - Human immunodeficiency virus
cclu04020
Calcium signaling pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04144
Endocytosis
cclu04672
Intestinal immune network for IgA production
cclu04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121581559
03260 Virion - Human immunodeficiency virus
121581559
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121581559
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121581559
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121581559
09142 Cell motility
04810 Regulation of actin cytoskeleton
121581559
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
121581559
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121581559
04050 Cytokine receptors [BR:
cclu04050
]
121581559
04090 CD molecules [BR:
cclu04090
]
121581559
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Chemokine
CXC Chemokine
121581559
Cytokine receptors [BR:
cclu04050
]
Chemokine receptors
CXC Chemokine
121581559
CD molecules [BR:
cclu04090
]
Proteins
121581559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
Motif
Other DBs
NCBI-GeneID:
121581559
NCBI-ProteinID:
XP_041752992
LinkDB
All DBs
Position
14:complement(14364562..14366093)
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AA seq
374 aa
AA seq
DB search
MTYYNHFVIQESDYDYNDTSYGFGSGLGDFGAGFEEPCDRELLSPSVQRIFIPVVYGFIF
TLGITGNGLVVFVLGCQRKARLSLTDRYRLHLSAADLLFMLALPFWSVDAALGDWRFGAV
TCVGVHVIYTVNLYGSVLILAFISLDRYLAVVKATDTSTTHIRQLLAHRYVYAGAWLPAG
LLAIPDMVFARTQEAGEGEMVCARLYPPENAPLWVSLFQLQMVLVGLVVPGLVLLVCYCV
IVSRLTRGPLGGQRQKRRAVRTTVALVLCFFLCWLPYCIGIAVDALLRLELIPRGCTLES
GLGVWLAVSEPMAYAHCCLNPLLYAFLGVGFKSSARRALTLTRMSSLKILPRRQTGAMTS
TTTESESSSSLHSS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgacctactacaaccactttgtgatacaagaatcggattatgactacaatgacacgagt
tacggttttggttctggcttgggcgatttcggcgctggatttgaggagccgtgtgaccgt
gagctgctgagccccagcgtgcagcgtatcttcatcccggtggtgtacggtttcatcttc
accctagggatcaccgggaatggcctggtggtgtttgtactgggctgccagcggaaggcc
cggctcagcctaacggaccgctaccggctgcacctctccgccgccgacttgctcttcatg
ctggcgctgcccttctggtctgtggacgcagcgctaggggactggcgcttcggagcagtc
acttgtgtgggtgtgcacgtcatctacacggtgaacctgtatggcagcgtgctgatcctg
gccttcatcagtctggaccgctacctggctgtggtcaaagccactgacaccagcaccaca
cacatccggcagctgctagctcacaggtatgtgtacgctggcgcctggctgcctgctggt
ctcctcgccatcccagacatggtgttcgctcggacccaggaggcaggagaaggggagatg
gtgtgtgcaaggctctatccgccagagaacgccccactgtgggtgtccctgtttcaactc
cagatggtgctggtggggctggtggtgccgggcctggtgctactggtgtgttactgtgtg
atcgtgtccaggctgacccgcggccctctgggaggacagaggcagaagaggagggcggtg
cggaccactgtggctttggttctctgtttctttctctgctggctgccgtactgcattggc
attgcagtggatgctctcctccgcttggagctgatccctcggggctgtacgttggagtca
ggccttggggtgtggttagcggtgtctgagccaatggcgtacgcccattgctgcttgaac
ccgctgctctatgccttcctgggagtgggtttcaagagttctgctcgccgcgccctcaca
cttacacgcatgtccagcctgaagattctcccgcgtagacaaacaggcgccatgacgtcc
acaacgacagagtcagagtcatctagtagtctgcactccagctaa
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