Coregonus clupeaformis (lake whitefish): 121582014
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Entry
121582014 CDS
T08357
Name
(RefSeq) F-box/WD repeat-containing protein 2 isoform X2
KO
K10261
F-box and WD-40 domain protein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121582014
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121582014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
EIF3I
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
F-box-like
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
F-box
Beta-prop_IFT122_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_WDR75_1st
Beta-prop_DCAF4
ANAPC4_WD40
WDR54
Motif
Other DBs
NCBI-GeneID:
121582014
NCBI-ProteinID:
XP_041753437
LinkDB
All DBs
Position
Unknown
AA seq
454 aa
AA seq
DB search
MEKAAFEGWLESVSASFLTLSDQQRNQSLDQLISLSNAVQLRHLSNGLEALLKRDFLRLL
PLELTFYLLRCLDPQTLLTCCLVCKQWNKVISACTEVWQGVCRDLGWRIDDSIQDASHWK
GVYLKAKLRMMQLKNQEAFETSSLIGHSARVYALYYKDGLLCTGSDDLSAKLWDVRTGQC
IYGIQTHTCATVKFDEQKLVTGSFDNTIACWEWSTGAKIQQFRGHTGAVFSVDYNDDLDT
LVSGSADFSVKVWALSAGACLNTLTGHTEWVTKVILQKSEVESMVHCPGDYILLSSDKYE
IKVWPIGREINCKCLKTLSVSEDRSVCLQPRLQFDGRYIVCSSDLGVYQWDFASFDILRV
IKTQDPANLSLLSFGEVFSLLFDTDFLYVMDLRTETITGRWPLPAYRKSKRGSSFLPGVT
SWLNGLDGRNDSGLVFATSMPDHSIHLVLWKENG
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggcggcctttgaggggtggctggagtcagtctccgcctctttcctcacgctt
agtgaccagcagcgcaaccagtccctggaccagctcatctcgctgagtaatgctgtccag
ctccggcacctgtccaatgggctggaggcgctgcttaagagggacttcctgcgcctgttg
cccctggaactcactttctacctgttgcgctgcctggacccgcagaccctgcttacctgc
tgcctggtgtgcaagcagtggaacaaggtgatcagcgcgtgcacggaggtgtggcagggc
gtgtgtcgggacctgggctggcgcatcgacgactccatccaggatgcgtcccactggaag
ggtgtctacctcaaggccaagctgcgcatgatgcagctgaagaaccaggaggcgtttgag
acgtcgtcgctcattgggcacagtgcgcgcgtctacgccctatactacaaggacggcctt
ctctgcacaggctctgatgacctttctgccaaattgtgggacgtccgcaccgggcagtgc
atttacggcattcagacgcacacctgcgccacggtgaagtttgacgagcagaagctggtg
acggggtcctttgacaacaccatcgcctgctgggagtggagcacgggggccaagatccag
cagttccgtgggcacacgggtgcagtgtttagcgtggactacaatgatgatctggacacg
ctggtgagcggctcggccgacttctctgtgaaggtgtgggccctgtcagcaggcgcctgc
ctcaacaccttgacgggacacaccgagtgggtcaccaaggtgattctccagaagagtgaa
gtagaatccatggtacactgtcctggtgactacatcctgttgagttcagataaatatgaa
ataaaggtttggcctataggcagggaaatcaactgcaagtgcttgaagaccctgtccgtg
tcagaggaccgcagtgtgtgtctgcagcctcgcctgcagtttgacggccgctacattgtc
tgtagctcggacctgggggtctaccagtgggacttcgccagcttcgatatcctcagggtc
atcaaaacgcaggaccccgccaacctctccctgctcagcttcggcgaggtgttctcgctc
ctcttcgacactgacttcctgtatgtcatggacctgaggacagaaactataacgggccgc
tggcccctgcccgcctacaggaagtccaaacgaggctccagcttcctgccgggagtcacc
tcctggctcaatgggctggatgggagaaatgactctggcctcgtgttcgccaccagcatg
cccgatcatagcattcacttggttctgtggaaggaaaacggataa
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