Coregonus clupeaformis (lake whitefish): 121582534 Help Entry 121582534         CDS       T08357                                  Symbol traf2b Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism cclu  Coregonus clupeaformis (lake whitefish) Pathway cclu04010   MAPK signaling pathway cclu04137   Mitophagy - animal cclu04141   Protein processing in endoplasmic reticulum cclu04210   Apoptosis cclu04217   Necroptosis cclu04621   NOD-like receptor signaling pathway cclu04622   RIG-I-like receptor signaling pathway cclu04920   Adipocytokine signaling pathway cclu05132   Salmonella infection cclu05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:cclu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     121582534 (traf2b)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     121582534 (traf2b)  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     121582534 (traf2b)   09143 Cell growth and death    04210 Apoptosis     121582534 (traf2b)    04217 Necroptosis     121582534 (traf2b)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     121582534 (traf2b)    04622 RIG-I-like receptor signaling pathway     121582534 (traf2b)   09152 Endocrine system    04920 Adipocytokine signaling pathway     121582534 (traf2b)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     121582534 (traf2b)   09171 Infectious disease: bacterial    05132 Salmonella infection     121582534 (traf2b)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cclu03019]     121582534 (traf2b)    04121 Ubiquitin system [BR:cclu04121]     121582534 (traf2b) Enzymes [BR:cclu01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      121582534 (traf2b) Messenger RNA biogenesis [BR:cclu03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      121582534 (traf2b) Ubiquitin system [BR:cclu04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     121582534 (traf2b) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-C3HC4_4 zf-RING_5 zf-RING_UBOX zf-RING_6 Motif Other DBs NCBI-GeneID:  121582534 NCBI-ProteinID:  XP_041754337 LinkDB All DBs Position 15:37203981..37228986 Genome browser AA seq 526 aa AA seqDB search MARISLPSLDSSLQGIPKSVLAVSMETKYQCQQCHQVLRKPVQAQCGHRFCVHCLKLLTS SGPKPCEACRQEEIYEEPQSILNSNEAFPDNAAGREIASLPAKCINEGCSWTGCIKEYEA QHEGKCEYERVPCEACQVLILRSEKERHNERECEARTLNCKYCKVSFNFKQIKAHDEICQ KFPIQCKDCGKKKIPREKFLDHSRSCAKSKTACPFSEVGCKTVIDNGKHSDHEQTSVMEH MRLILAMMSMVRLQCPEAAGPGEWQEDSGLGLYRAPEEGATASAATAGGGAAASGQTSGL DQKVTVLENIVCVLNREVERSSLTLEAFSRQHRLDQDKIENLSNKVRQLERTLTMRDLQL AETDQTLRELQFCTFDGVFVWKIADFSRRRQDSVAGRTPAMFSPAFYSSKYGYKMCLRLY LNGDGTGRGTHLSLFFVVMRGKCDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDVSSTS FQRPISEMNIASGCPLFCPLAKLTGKSSYLRDDTIFIKAIVDLTGL NT seq 1581 nt NT seq  +upstreamnt  +downstreamnt atggctcgcatctccctgccctctttagactcctccctccaagggatacccaagagtgtg ctggctgtttccatggaaactaagtaccaatgccagcagtgtcaccaggtcctgaggaag ccggtccaggctcagtgtggacatcgcttctgtgtccactgtttgaaactgctcaccagc tctggacccaagccctgtgaagcctgtcgacaagaggagatatacgaggagccccagtcc attctcaatagcaatgaggcttttccagacaatgcagctggtagagaaatcgccagcctg cctgccaaatgtatcaatgagggatgctcttggacaggttgcatcaaagaatatgaggca caacacgagggcaagtgtgagtatgagcgggtaccatgtgaagcctgccaggtcctcatc ctgcgcagtgaaaaagagaggcacaacgagagagaatgtgaagcaagaacattgaactgc aagtactgcaaagtctccttcaacttcaagcagatcaaggctcatgatgaaatctgccag aagtttcccattcagtgcaaggactgtggaaagaaaaagatcccacgggaaaagtttcta gatcacagcagatcctgtgccaagtctaagactgcatgtccattcagtgaggttggctgc aagactgtgattgataatgggaagcacagtgaccacgagcagacgagcgtcatggagcac atgcgtctgatcctggcgatgatgtctatggtgcggctgcagtgtccggaggccgcgggg ccgggggagtggcaggaggactctgggctgggcctttaccgcgctcctgaggagggagcc acagcttctgcagccacagccgggggcggagccgctgcctctggacagaccagtggcctt gaccagaaggtaacagtgctggagaatatagtgtgtgtactgaacagagaagtagagagg agctctctcacattagaggccttctcacgacaacatagactagaccaggacaagattgag aacctcagcaacaaggtgcgtcaactagagcgtactctcaccatgcgggatctacagcta gccgagacagaccagactctgagggagctccagttctgcacctttgacggtgtgtttgtt tggaagatcgctgacttctcacgccgccgccaggattctgtggccgggcgaacacccgcc atgttctcaccagcattctactccagtaagtatggctataagatgtgtctaagactgtat ctgaatggggacggaacaggtcgagggacacacctttctcttttcttcgtggtgatgagg ggcaagtgtgacgctctgctcaaatggcccttcagtcagaaagtgactctgatgctgctg gatcagaataaccgggagcatattattgacgccttccgacctgatgtcagctccacctcc ttccagcggccaatcagtgagatgaacatagccagtggctgcccactcttctgcccatta gctaaactgacaggcaaaagctcctaccttagggatgataccattttcatcaaggccatt gtagacctcacaggcttgtag

DBGET integrated database retrieval system