Coregonus clupeaformis (lake whitefish): 121582607
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Entry
121582607 CDS
T08357
Name
(RefSeq) tumor necrosis factor receptor superfamily member 10B-like
KO
K04722
tumor necrosis factor receptor superfamily member 10A/B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04115
p53 signaling pathway
cclu04210
Apoptosis
cclu04217
Necroptosis
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121582607
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121582607
04217 Necroptosis
121582607
04115 p53 signaling pathway
121582607
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121582607
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cclu04050
]
121582607
04090 CD molecules [BR:
cclu04090
]
121582607
Cytokine receptors [BR:
cclu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
121582607
CD molecules [BR:
cclu04090
]
Proteins
121582607
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
DUF4381
DUF6721
Gemini_mov
Motif
Other DBs
NCBI-GeneID:
121582607
NCBI-ProteinID:
XP_045081028
LinkDB
All DBs
Position
15:29066438..29104784
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AA seq
469 aa
AA seq
DB search
MIVAGVWSFMMIFNLTFMKCSVVVFLLCSGLAYCGAELSGVLAAQWSSDDRNRTQRHRTC
LENHQYLHQDLCCLNCQAGTFVQRACDRDMEQGTCMSCEHGHTYTEHSNGMNSCLPCTHC
RKDQSETVPCTSTTDTECQCRAGTFCVPEQACEVCKRCAKCKAGEEVVKKCTPISNTVCR
KRDISPTLHPPTLPTPAPSSPEKMVMPLVILLLFFLLSIGIGLWLWIKRPCTFRPVCLSA
SDSRCDSNEIVKIPIDESGPTAEERQNSQNAGLEGEEAEEVRPESRPLLQETQGGLIKAS
PPLSLGEDEDRGLGDSLPNTTSSSQTSLSALPTAGAASSSSSPRHSPSTQRLQPTAGDDP
LQKKLVPLLGEETSLKKSFDLYDEWLDVRIHNKFFRYIGVNDNHIKMADSAPPGDKVYDL
LKNWMQKEGLKADINVLLQALLSLDQRRSAESIAFAAIQRGYYKHADMP
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgattgtcgctggagtttggagtttcatgatgatcttcaatctgacgttcatgaaatgt
tcggtggtggtgttcctgctgtgctcggggctggcatactgtggggcagagctgagtggc
gtgttggcggcccagtggtccagcgatgacaggaaccggacgcagcgacacagaacctgt
ctggagaaccatcagtacctccaccaggacctctgctgcctcaactgccaggccggtacg
ttcgtgcagagggcgtgtgaccgggacatggagcaggggacatgtatgtcctgcgagcat
ggccacacctacacagaacactccaacgggatgaacagctgcctgccctgcacgcactgc
cgcaaggatcagagcgagacggtgccctgtaccagtaccacagacaccgagtgccagtgt
cgagcgggcaccttctgtgtgccagagcaggcctgtgaggtctgcaagagatgtgccaag
tgtaaagcgggggaggaggtggtgaagaaatgcacccccatctccaacactgtgtgtagg
aaacgggacatctctcctaccctccacccacctaccctccccacccccgcccccagctca
ccagagaaaatggttatgccattggtcattctgctcttgttcttcctcctctccattggg
attggtttgtggctttggatcaagaggccatgtacatttcggccagtttgtctctccgct
tcagacagtcgctgtgactccaatgagatcgtgaagattcccatcgatgagagtggaccc
acagcagaggagagacaaaacagccagaacgccggcctggagggggaagaagcagaggag
gtccgtcccgagtcacgtcccctgctgcaggagacccagggtgggctgatcaaggcctcc
cctcccctgagcctgggggaggacgaggaccggggcctaggtgacagcctgcccaacacc
accagctcctcccagacaagcctgtcggccttgcccaccgccggggcagcctcgtcgagc
agctctccccgacatagcccctccacccagagactgcagcccacagccggggatgatcct
ctgcagaagaaattggtgcccctgctaggagaggagacgtccctgaagaagagcttcgac
ctctacgacgagtggctggacgtgcggatccacaacaagttcttccgctacatcggtgtc
aatgacaaccacatcaagatggcagatagtgcccctcctggcgacaaggtgtacgacctg
ctgaagaactggatgcagaaggagggtctgaaggcagacatcaatgtcctgctccaggcc
cttctcagcctggaccagaggcgctccgctgagagcatcgcctttgctgccattcagagg
ggctactacaaacacgcagacatgccctga
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