Coregonus clupeaformis (lake whitefish): 121584213
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Entry
121584213 CDS
T08357
Symbol
hdr
Name
(RefSeq) hematopoietic death receptor
KO
K04722
tumor necrosis factor receptor superfamily member 10A/B
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
cclu04115
p53 signaling pathway
cclu04210
Apoptosis
cclu04217
Necroptosis
cclu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121584213 (hdr)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121584213 (hdr)
04217 Necroptosis
121584213 (hdr)
04115 p53 signaling pathway
121584213 (hdr)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121584213 (hdr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
cclu04050
]
121584213 (hdr)
04090 CD molecules [BR:
cclu04090
]
121584213 (hdr)
Cytokine receptors [BR:
cclu04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
121584213 (hdr)
CD molecules [BR:
cclu04090
]
Proteins
121584213 (hdr)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Death
MLANA
Miga
DUF2371
DUF6479
Cytadhesin_P30
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
121584213
NCBI-ProteinID:
XP_041755977
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Position
16:complement(49219304..49231609)
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AA seq
428 aa
AA seq
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MSDIGLHYMVVLLIWALSPTVADQSGLELTRTGGRDRNMTQRDISCRENLEYPHDNICCL
NCLAGTYVKAYCTRTLERGTCEACDIDTYTEHDNGLRQCLKCTECRSDQVTMKACTITQD
RECQCKPGLFCAPDEACEVCKKCLRCKENEVRVKNCTTTSNTVCKTRMPTSSTVSAGVIV
IVVAVLGITAAIVGVYWKRRKCCKRRDSQNTPSETLKIVVDDQNNRSIEERQNNRSAVSD
YTRLHPLLEVTQAVGAKASSATEDEDNGLGDSLHNTTNSSQSSLSALPSAPFPRYSPLSS
PSVKRQPDNAAREDVLLRKLAPLNGDESLKKCFELFEELDVYYHNRFFRHIGLSDNAIKS
AAHLHPEDRVYELLKVWLEKVGMQADMNDLIKALLYLDQKLSAENIISKAIKNGFFEYAV
NEYAENKK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatataggcctacattacatggttgtcctcctaatctgggccctcagccctacg
gtggcagatcagtctggtctagagttgacacggacaggaggcagagacagaaacatgaca
cagcgggacatctcatgccgggaaaacctggagtacccacatgacaacatctgctgttta
aactgcctagctggtacatatgtcaaagcgtactgcacacgtaccttggagagaggaaca
tgtgaggcctgtgacattgacacatacactgaacatgacaacggactacgacagtgctta
aagtgcaccgagtgtcgctcagatcaggtgactatgaaggcatgcaccatcactcaggac
agagagtgccagtgtaaaccagggttattctgtgcccctgacgaagcctgcgaggtgtgc
aaaaagtgcttacgatgtaaagagaatgaggtgagggtgaagaattgcaccactacgtcc
aacacggtctgtaagaccagaatgcccacatccagcaccgtctcagccggtgttattgtg
attgtggtggcagtactgggtatcactgctgcaattgtcggtgtctattggaagaggcga
aagtgctgtaaaaggagagactcccagaacactcccagtgagacgctgaagattgtggtg
gatgatcaaaacaacaggtcaattgaggagaggcagaacaaccgaagtgctgtgtcggat
tacacacggctccatcccttgctggaggtgacccaggcggtgggtgccaaagcttcctca
gccactgaggatgaggacaatggactgggcgacagcctccacaacaccaccaactcctcc
cagtccagtttgtctgcactaccctcagcccccttccccagatactccccgctttccagc
ccttcggtcaagaggcagcctgacaatgcggctagggaagatgtccttctcagaaaactt
gctcctttgaatggtgacgagtccttgaagaaatgttttgaactttttgaagagctggac
gtttactaccataacagattcttcaggcacattggactcagtgacaacgctataaaaagc
gctgcacaccttcatcctgaagaccgagtctatgaactgttgaaagtatggttggaaaag
gtgggcatgcaagctgacatgaatgacctaatcaaagccttactttatttggaccaaaag
ttatcagcagaaaatattatttctaaagccattaaaaatggtttttttgaatatgcagta
aatgaatatgcagaaaataaaaagtga
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