KEGG   Coregonus clupeaformis (lake whitefish): 121584618
Entry
121584618         CDS       T08357                                 
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
  KO
K20795  [histone H4]-lysine20 N-methyltransferase PRDM6 [EC:2.1.1.361]
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu00310  Lysine degradation
cclu01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    121584618 (prdm6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:cclu03000]
    121584618 (prdm6)
   03036 Chromosome and associated proteins [BR:cclu03036]
    121584618 (prdm6)
Enzymes [BR:cclu01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.361  [histone H4]-lysine20 N-methyltransferase
     121584618 (prdm6)
Transcription factors [BR:cclu03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 PRDM
    121584618 (prdm6)
Chromosome and associated proteins [BR:cclu03036]
 Eukaryotic type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     121584618 (prdm6)
SSDB
Motif
Pfam: PRDM2_PR zf-C2H2 zf-C2H2_4 zf-H2C2_2 SET zf-C2H2_jaz zf-C2H2_11 Zap1_zf1 zf-C2H2_15 DUF629
Other DBs
NCBI-GeneID: 121584618
NCBI-ProteinID: XP_041756542
LinkDB
Position
16:complement(52454409..52508277)
AA seq 591 aa
MLKPGDPSGSAFLKVDPTYMQHWQQLFPQSQLKNGGITQLQPPDRVAVPVESLRQRPNLI
SSTSSSSALTPSSTSSSTPSVSSLAGLSQLSVPQIALFGQTLCSDIVSSDNTNLQAKELC
ISSSFKNDKGSRFKLTSDELDYYLYGQQRMEIIPLNNHTGDHNNRCDMCADNRNGECPMH
GPLHSLRRLVGTSSAAPAVPPPDVPDWLRDLPREVCLCTSTVPGLGYGICAAQRIPQGTW
IGPFAGVPLLLDKLQSGGVRNTRHLWEIYDQEGTLQHFIDGNEPSKSSWMRYIRCARHCG
EQNMMVVQYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPTTVME
AMSRQETLQPLSKTGKGFSVALLRSMVFPHSPCSRSFSLMDKGGHTDSGFNQMSSKNQRV
LASPTSTSQLSTEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRAKRPGIALLRVSNG
KEVVVCSTEGPLPQPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLN
NHIRTHTGEKPFKCERCDRSFTQATQLSRHQRMPNECKPISGESSESIEVD
NT seq 1776 nt   +upstreamnt  +downstreamnt
atgctaaaacccggtgaccctagcggatctgctttcttgaaagtggacccgacgtacatg
caacactggcagcagctcttccctcaaagccagctgaagaatggaggcattacgcagctg
cagccgccggacagggtagctgttccggtggaaagtctccgtcagcggccgaacctgatc
tcctccacatcatcatcgtcggctttaacaccttcctccacatcttcatcgactccatcc
gtttcatcattggcaggtttatctcaactatctgtgccacaaattgcactttttggacaa
actctctgttccgacattgtctcgtcagacaacaccaacctccaagcgaaagaactttgt
atatcctccagctttaagaatgacaaagggtccagatttaaactgacctccgatgagtta
gactactacctctacggacagcagagaatggagattatcccattgaacaatcacaccggc
gaccacaacaatcgttgtgacatgtgtgcagataaccgtaacggagagtgccccatgcat
gggcccctgcactcgctgcggcgcttggtggggacaagcagtgcagcgccggccgtgccg
cccccagatgtccctgactggctgcgggacctgccccgtgaggtgtgcctctgcaccagc
actgtgcccggccttggctacggcatctgtgccgcccagcgtatcccacagggcacctgg
atcggccccttcgcgggagtccccctcctcctggataagttgcagtcaggaggggtgcgg
aacacaaggcacttatgggagatctatgaccaggaagggacgttacagcactttattgac
ggcaacgagccgagcaagtcgagctggatgagatacatccgctgtgcacgacactgtggc
gagcaaaacatgatggtggtccagtacagatcatgtatattctaccgggcatgtatggac
attccaagaggaacagagctcctcgtctggtacaatgacagctatacctccttctttggc
atccctctacagtgcattgcacaggatgaaaacttgaatgtaccaaccacagtcatggag
gccatgagcagacaagagaccctgcagccgctcagtaaaacgggcaaaggcttctcggtg
gccctgctgcgctccatggtcttcccccactcgccctgctccagaagcttctccctgatg
gacaagggcggccacacggactccggcttcaaccagatgagctctaagaaccagcgagtc
ctagccagccccacctccaccagccagctgagcaccgagttcagtgactggcacctctgg
aagtgcggccagtgctttaagactttcacgcaacgcatcctgctccagatgcacgtgtgc
acacagaacccagacagggcgaaaaggccagggatcgccctactgagagtttcaaatggg
aaagaagtggtggtctgtagcacagaagggcctctacctcaaccttaccagtgtggacac
tgctcccagtccttctctcagccgtcggagctgcgcaaccatgtcgtcactcactccagc
gaccggcccttcaagtgtggctattgtggtcgggcgtttgcaggagccaccactctcaac
aaccacatccggacccacactggggagaagccattcaagtgtgagcggtgcgacaggagc
ttcacgcaggccacccagctcagcagacaccagcggatgcccaacgagtgcaagcccatc
agcggcgagagcagcgaatcaatcgaggtggattag

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