Coregonus clupeaformis (lake whitefish): 121584618
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Entry
121584618 CDS
T08357
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6 isoform X1
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00310
Lysine degradation
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121584618 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cclu03000
]
121584618 (prdm6)
03036 Chromosome and associated proteins [BR:
cclu03036
]
121584618 (prdm6)
Enzymes [BR:
cclu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
121584618 (prdm6)
Transcription factors [BR:
cclu03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
121584618 (prdm6)
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
121584618 (prdm6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_jaz
zf-C2H2_11
Zap1_zf1
zf-C2H2_15
DUF629
Motif
Other DBs
NCBI-GeneID:
121584618
NCBI-ProteinID:
XP_041756542
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Position
16:complement(52454409..52508277)
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AA seq
591 aa
AA seq
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MLKPGDPSGSAFLKVDPTYMQHWQQLFPQSQLKNGGITQLQPPDRVAVPVESLRQRPNLI
SSTSSSSALTPSSTSSSTPSVSSLAGLSQLSVPQIALFGQTLCSDIVSSDNTNLQAKELC
ISSSFKNDKGSRFKLTSDELDYYLYGQQRMEIIPLNNHTGDHNNRCDMCADNRNGECPMH
GPLHSLRRLVGTSSAAPAVPPPDVPDWLRDLPREVCLCTSTVPGLGYGICAAQRIPQGTW
IGPFAGVPLLLDKLQSGGVRNTRHLWEIYDQEGTLQHFIDGNEPSKSSWMRYIRCARHCG
EQNMMVVQYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENLNVPTTVME
AMSRQETLQPLSKTGKGFSVALLRSMVFPHSPCSRSFSLMDKGGHTDSGFNQMSSKNQRV
LASPTSTSQLSTEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRAKRPGIALLRVSNG
KEVVVCSTEGPLPQPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLN
NHIRTHTGEKPFKCERCDRSFTQATQLSRHQRMPNECKPISGESSESIEVD
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaacccggtgaccctagcggatctgctttcttgaaagtggacccgacgtacatg
caacactggcagcagctcttccctcaaagccagctgaagaatggaggcattacgcagctg
cagccgccggacagggtagctgttccggtggaaagtctccgtcagcggccgaacctgatc
tcctccacatcatcatcgtcggctttaacaccttcctccacatcttcatcgactccatcc
gtttcatcattggcaggtttatctcaactatctgtgccacaaattgcactttttggacaa
actctctgttccgacattgtctcgtcagacaacaccaacctccaagcgaaagaactttgt
atatcctccagctttaagaatgacaaagggtccagatttaaactgacctccgatgagtta
gactactacctctacggacagcagagaatggagattatcccattgaacaatcacaccggc
gaccacaacaatcgttgtgacatgtgtgcagataaccgtaacggagagtgccccatgcat
gggcccctgcactcgctgcggcgcttggtggggacaagcagtgcagcgccggccgtgccg
cccccagatgtccctgactggctgcgggacctgccccgtgaggtgtgcctctgcaccagc
actgtgcccggccttggctacggcatctgtgccgcccagcgtatcccacagggcacctgg
atcggccccttcgcgggagtccccctcctcctggataagttgcagtcaggaggggtgcgg
aacacaaggcacttatgggagatctatgaccaggaagggacgttacagcactttattgac
ggcaacgagccgagcaagtcgagctggatgagatacatccgctgtgcacgacactgtggc
gagcaaaacatgatggtggtccagtacagatcatgtatattctaccgggcatgtatggac
attccaagaggaacagagctcctcgtctggtacaatgacagctatacctccttctttggc
atccctctacagtgcattgcacaggatgaaaacttgaatgtaccaaccacagtcatggag
gccatgagcagacaagagaccctgcagccgctcagtaaaacgggcaaaggcttctcggtg
gccctgctgcgctccatggtcttcccccactcgccctgctccagaagcttctccctgatg
gacaagggcggccacacggactccggcttcaaccagatgagctctaagaaccagcgagtc
ctagccagccccacctccaccagccagctgagcaccgagttcagtgactggcacctctgg
aagtgcggccagtgctttaagactttcacgcaacgcatcctgctccagatgcacgtgtgc
acacagaacccagacagggcgaaaaggccagggatcgccctactgagagtttcaaatggg
aaagaagtggtggtctgtagcacagaagggcctctacctcaaccttaccagtgtggacac
tgctcccagtccttctctcagccgtcggagctgcgcaaccatgtcgtcactcactccagc
gaccggcccttcaagtgtggctattgtggtcgggcgtttgcaggagccaccactctcaac
aaccacatccggacccacactggggagaagccattcaagtgtgagcggtgcgacaggagc
ttcacgcaggccacccagctcagcagacaccagcggatgcccaacgagtgcaagcccatc
agcggcgagagcagcgaatcaatcgaggtggattag
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integrated database retrieval system