Coregonus clupeaformis (lake whitefish): 121584953
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Entry
121584953 CDS
T08357
Name
(RefSeq) DNA polymerase kappa
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
121584953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cclu03400
]
121584953
Enzymes [BR:
cclu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
121584953
DNA repair and recombination proteins [BR:
cclu03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
121584953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH
Motif
Other DBs
NCBI-GeneID:
121584953
NCBI-ProteinID:
XP_041757159
LinkDB
All DBs
Position
16:43567722..43580113
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AA seq
968 aa
AA seq
DB search
MATGGTSSSSGEGFLSRMALNDNKAGMKGLDRDKINKIIMESSKGSRFYENELKKEQQVN
QRIERMRLQKAHITEQQLSKAQAQVEKMTSDLERGRDLSHVIVHVDMDAFYAAVETRDCP
DLMDKPMAVGSMSMLSTSNYHARKFGVRAAMPGFIAKKLCPNLVIVPTNFDKYRAVSAEV
REVFADYDPHFLPMSLDEAFLDISEHLEQRRGWPEALRTHRLRLHTNNTGAARVEEHGDG
LPETVGVESLSPVLFEDSPSSSPCLQDAAGGDVVVFGTCAEEAVREMRFRIEQKTSLTAS
AGIAPNMMLAKVCSDKNKPNGQYRLPSNRQAVIDFIQDLPVRKVSGIGKVTEKMLGVLGI
TSCSHLGQEMAMLTLLFSETSWHHFLHISLGLGSTHIERDGERKSMSTERTFGEMSALEE
QFSLCRELCQDLAQDLQKEALKGKTVTLKLKNVNFEVKTRAWTLPCAVATMEELFAVAKN
LLKTEIDNVSPQPLRLRLMGVRVSSFASADDKKPRQKSIVGFLQKNGADSSSPFQISSHK
PVIEHQPKPPGQTKPSACPSLVQQSQGQEGHSWVPSRGGVEVGRTGETFQQSFLQRAHTQ
RQRLQVEREDPPENGDWNGLETRRGPASSATNTKDTQTHTQKNTNTSAETHISMSALTAS
DKMTHAPTASTTEAHASTSSCCSTEPESGTDSLTCPVCFRAVNTTDLTVFNRHVDQCLGG
VTMGQNNHTDTEIERGPSVCEEEVEKEITVGERKWEEGVMEKGRELLRRCMLDSVGLRLD
SSAGDHIEDTTGLLLYETSTANISLNTVGLNPVCLNTCPNGGVSICRGTDPNTLNGSSQS
DPHVRVCLLSPGGPRPMTTPKPESHDHRGPTLTCPVCLETQDTNDLILFNRHVDLCLNQE
VLHELGGLASMDRTPHNAPPAAHKEREQPLQRAPQKGKSKRRGLSPPPPPKKAKALGPAR
NTIDKFFR
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaggggggacctcctcttccagtggggagggcttcctctccagaatggccctc
aatgacaacaaggctggaatgaagggccttgacagggacaagataaacaagatcatcatg
gagtcctctaagggctccaggttctatgagaacgagctgaagaaggaacagcaggtgaac
cagcgcattgagaggatgaggctgcagaaagcacacatcactgagcaacagctgagcaaa
gctcaagcacaggtggagaagatgacctctgacctggagaggggtcgtgacctgagccat
gtcattgtgcacgtggatatggatgccttctacgctgcggtggagacgagagactgtcct
gacctgatggacaaacccatggctgtgggctccatgagcatgttgtcaacatccaactac
catgccaggaagtttggggtccgtgccgccatgcctggcttcatcgcaaagaagctctgc
ccaaacctggttattgttccaaccaactttgacaaatacagagcagtgagcgctgaagtc
cgggaggtctttgcagactatgaccctcacttcctgcccatgagtctcgacgaagcattc
ctggacatcagtgagcaccttgagcagaggaggggctggccagaggccctccgtacccac
cgtctccgtctccacaccaacaacactggggcagctagagttgaagagcatggtgatggc
ctacctgagacagtaggggtagagagtttgtctcctgttctgtttgaggacagccccagc
tcctccccctgtctgcaggatgctgctgggggagacgtggtggtgtttgggacctgtgcc
gaggaggcggtgagagagatgcgcttccgcatcgagcagaagacctcactaactgccagc
gcaggcattgccccaaacatgatgctggccaaggtgtgtagtgataagaacaaacccaac
ggccagtacagactcccctctaaccgacaggctgtcatagacttcatacaggacctgcca
gtccggaaggtctcaggcattgggaaggtgacagagaagatgctgggagttcttggtatc
accagctgttcccatcttggccaggagatggcgatgctgaccctgctgttctctgagacg
tcttggcatcacttcctccacatctccctgggcctgggctccacacacatcgagagggac
ggagagagaaaaagcatgagtacagagaggacgtttggagagatgagtgcattagaggag
cagttctctctgtgcagggagctgtgccaagacctggctcaggacctgcagaaggaggct
cttaagggcaagacggtgacgttgaagctgaaaaatgtcaactttgaggtgaaaaccaga
gcgtggacgttgccgtgtgctgttgctacgatggaagagctctttgctgtcgctaagaac
ttgctgaagactgagatcgacaacgtcagcccccagccactgagactgaggctcatgggc
gttcgagtttccagcttcgccagcgctgatgacaagaaaccccggcagaagagcattgtg
ggatttctccaaaaaaatggggctgactcaagtagccccttccagatctcctcccacaag
cctgtgatagagcatcaacctaagcctccaggccagaccaagccctctgcctgcccttcc
ctggtacagcagagccaggggcaggagggtcactcctgggtacccagccggggaggggtg
gaggttgggaggactggggagaccttccagcagtccttcttgcagagagctcacacccag
aggcagcggctgcaagttgagagagaggacccaccagagaatggagattggaatggctta
gagaccagacggggcccagcctcatcggccaccaacaccaaagacacacagacacatact
cagaagaatacaaatacatcagcagagacacacatctctatgagtgcattgacagcttct
gacaaaatgacacatgcacctacagccagcaccacagaggcccatgcatccacttcatca
tgctgttcaacagagccagagtcagggacagacagtctgacctgccctgtgtgcttcagg
gctgtaaacaccacagacctgacagtcttcaacagacatgttgaccagtgtctcggtggg
gttactatggggcaaaacaaccacacagacacagaaatagagagaggccccagtgtctgt
gaggaggaggtggagaaagagataactgtaggggagaggaagtgggaggagggggtgatg
gagaaaggtagggagctactccgtaggtgcatgttggactcagtgggccttcgattggac
tctagtgcaggtgatcatatagaggacactacaggactacttctatatgagactagtaca
gctaatatttcactaaacactgtgggcctgaaccctgtctgccttaacacttgtccaaat
ggaggtgtatctatatgtagaggtacagaccctaacaccctgaatggttcgtctcaaagt
gaccctcatgttcgggtttgtctgttgtcccccggtggccctcggccaatgactacgccc
aagcctgagtcacatgaccacagaggccccaccctcacctgtccagtttgtctggagacc
caggacaccaatgacctcatcctttttaaccgacacgttgacctctgtctgaaccaggaa
gtcctgcatgagcttgggggactggcgtctatggaccgcaccccccacaatgcaccacct
gctgcccacaaagagagagagcagcccctgcagagagcgccacagaaaggcaagagcaaa
aggagaggcttgtctcccccacccccccctaagaaggccaaagcccttggcccagctagg
aacaccattgacaagttcttcaggtga
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