Coregonus clupeaformis (lake whitefish): 121585174
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Entry
121585174 CDS
T08357
Name
(RefSeq) tight junction protein ZO-2 isoform X1
KO
K06098
tight junction protein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121585174
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
Guanylate_kin
PDZ_2
SH3_2
SH3_1
Motif
Other DBs
NCBI-GeneID:
121585174
NCBI-ProteinID:
XP_041757499
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Position
16:complement(53472381..53628090)
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AA seq
1306 aa
AA seq
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MKYKKFITIMQAAIGVAPLNKRELMPPPRKLWKPADQQNAPGLFQTNQSWDSFYGTGDTR
SYYLHDVRHISDARRLSVRRRTIPCLASPWKESSGMEETVWEQYTVNLQRDSKMGFGIAV
SGGRDNPNVENGETSIIVSDVLQGGPADGLLFENDRVIQVNSILMDNVPHSFAVQQLRKC
GKTAKITVKRPRKVALHSLKHPPSPGAESRDFGSTRYYDADDNQSDGGWHRGNGGPGYNR
EPRDLTPDNKSYLDPDYGGHGNRGRSRGRSKERASQSPEPHRDNSRGRALDREPPSPERP
RYPRERSRGRSTDRERGGGGGSPGGRNYSRGDSYERGGGRYGDGGGTGGRMVKSKSRDHL
HEPSRSPSPDLPRGGARDLEPLEKPVNVLLVKNRPNEEYGLRLGSQIFIKEMTSTGLAAK
DGNLQEGDIILKINGTVTENLSLNDAGKLIEKSRGKLQLVVQRDRRQILIRIPPLVDSDS
EPDDISEMESYSPQEDRRSRQSDLSSHSSNERENPRPLTSLEDSPRVAKMSAMASPFRVP
PLQDPHAPGPAPVPGPAILDSEGLPRLDEPPDVFMYCLPASAKTTPKILLRPSPEDEELY
GANTVMVSFQKGDSVGLRLAGGNDVGIFIAGIQEGSPAEEEGLRTGDQIMKVNSVDFRGI
VREEAVLFLLEIPKGEDVTILAQSKPDVYNDILVSGRGDSFFIRTHFEYEREAHQSLAFS
RGEIFKVVDTLYDGKLGNWLAIRTGKDKQLLEKGIIPNKSRADQMASVQNSHKAAGTDRA
DFWRLRGQRAAKRKELRKSREDVGATPVATRFPAYERVVLREAGFRRPVVLFGPIADAAN
DKLASELPDLFVIAKTEPKDAGSEKSSGVVRLNTIRQIIEQDKHALLDVTPKAVDTLNYT
QWYPIVIFFNPDNKPGVKAMRQRVIPGSNRSARKLYEQAVKLRKTCSHLFTATIDVNSAN
DAWYGSVKDSIREQQTQAVWVSEGKLDGTEMDLDLHDDRMSYLSAMSADYLSMDSRLASD
YDDTADEGGAYTDNELDNEPADQLHVSAISRSSEPVLAEEILRRCSPEIRGGVRRVGSSA
SPPPAFVPDPPKVKLLFRDEVVPPRGVIGSYEPPSSRGYDSHSSSPASDPPPLPRTLNSF
GKAKPLAPPPIALKPSYNTQDTTSSTAPYTTAFRGPEQPGESLEDPSLKSFLGKIKAFEK
MDHFARAQRMLELQEAQNARLEIAQKHPDIYAVPVKTQKLDHSRPQPIGSSSRPEPQTPP
SKLPYSESRGFYPSEEEEEECRRQLADHTKRGYYQTNNQKYQDTEL
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgaagtataagaagttcatcacgatcatgcaggcggccatcggagtggccccactcaac
aaacgggagctgatgcctccgccacgcaaactctggaaaccagcagatcagcagaacgca
ccaggcttgttccaaaccaaccaatcgtgggacagcttttacgggactggcgacacccgc
tcctactacctccacgacgtacgccatatttctgacgcacgccgcctgtctgttcgccgt
cgaactataccctgtttagcaagtccctggaaggagagctcaggaatggaggagactgtt
tgggagcagtacactgtgaacctacagagggactccaagatggggtttggtatcgctgtg
tcgggggggcgggacaaccccaacgtggagaacggcgagacatcaatcatcgtgtcagac
gttttgcagggaggaccagctgatggactactgtttgaaaatgaccgtgtgatccaagtc
aactccatcctcatggacaacgtgcctcattccttcgctgtgcagcagctacgcaaatgt
gggaagaccgccaagataacagtgaagagacctcggaaggtggctctccactccctgaaa
caccctccctctcctggcgccgagagtcgagacttcggctccacccgctactacgatgcc
gatgacaaccagagtgacgggggctggcatcgtggcaacggtggtcctggttacaaccgc
gagcctcgcgacctcacccctgacaacaagagctacctggaccccgactacggcggccat
ggtaaccgagggagaagccgggggaggagcaaggagagggcgtcgcagagcccggagcct
caccgcgacaacagcagggggcgggccttggaccgggagccacccagtcccgagaggcca
cggtatccacgggaacgcagccgggggaggagcacggaccgggagagaggagggggagga
ggaagtccaggtgggaggaactacagccggggagacagctacgagcgaggaggggggcgg
tacggcgatgggggaggtaccggggggaggatggtgaagagtaagagtagagaccacctc
catgagccgtcccgatcgccctcccctgacctcccccgaggaggagctagagacctggag
cccttggagaaacctgttaacgtcctgctggtcaagaacagacccaacgaagagtatggt
ctgcgtctgggcagtcagatattcatcaaggagatgaccagtacaggactggctgccaag
gacggaaacctacaggagggagacatcatcctcaagatcaatgggacagtaacagagaac
ctgtctctgaacgatgcagggaagctcatagagaagtctagaggaaaactccaactggtc
gtccagagagaccgccgccagatcctcatccgtatcccgcccctcgtagactccgactcc
gaacctgatgatatctcagagatggagtcctactccccacaggaggaccgtagatctcgc
cagtcggacctatcctcccactcctccaacgagagagagaaccccagacctctaaccagc
ctggaagactctcccagggtagccaagatgtctgccatggcctcgccctttagggtgccc
cccctacaggacccccacgccccgggccctgcccccgtcccgggccctgccatcctggac
tcagaggggctgccacgcctcgacgagccaccagatgtgttcatgtattgtttaccagcg
tcagcaaagaccactcctaagattctgctacgccccagcccagaggatgaagagctctat
ggcgctaacacagtgatggtgagtttccagaagggggacagtgtgggtctgaggctggcg
gggggtaacgatgtgggcatcttcatcgctggcatccaggagggcagtcctgccgaggag
gaagggctacgcaccggagaccagatcatgaaggtgaatagcgtggacttccgaggcatc
gtgagagaggaggctgttctgttcctgttggagattcctaaaggagaggacgtcaccata
ctggcccagagtaaacctgatgtctacaatgacatcctggtgtctggtcgtggagactcg
ttctttatcaggactcattttgagtatgagcgggaggctcaccagagcctggccttctcc
agaggggagatcttcaaggtggtggacactctctacgatggcaagctgggcaactggctg
gccatccgcaccggcaaggacaaacagctgctggagaaaggcatcatccccaataagagc
agggctgatcagatggcgagcgtccagaactcccataaggctgctgggacggaccgcgcc
gacttctggcgtctgagaggtcaaagggcagccaagaggaaggagctgaggaagagcaga
gaggatgttggtgctacgcccgtcgccacacgcttccctgcttacgagagagtcgtgctc
agagaggctggtttcagacgtcctgtggttctgtttggtcctatagctgatgcagccaat
gacaagctggccagcgagctgcctgacctgtttgtcatcgccaaaactgagcctaaagat
gctgggtcggagaaatcctcaggagtggtgagacttaacaccatccgccagatcatcgag
caggacaagcatgccctgctggatgtgactcccaaggcggtggacactctgaactacacc
cagtggtaccccatcgtcatcttcttcaacccagacaataaaccaggggttaaggccatg
aggcagagggtgatacctgggtccaaccgcagcgctagaaaactatatgaacaggctgtc
aaactgagaaagacctgctctcacctattcactgctactattgatgtgaactcggccaat
gatgcgtggtacggcagtgtgaaggactctatcagggagcagcagactcaggctgtgtgg
gtgtctgaggggaagctggacgggacggagatggaccttgatctccatgacgaccgcatg
tcttacctgtcagccatgtcagccgactacctgagcatggacagccgattggccagcgac
tacgatgacacggcggacgagggcggggcttacacggataacgagctggacaacgagccg
gctgaccaactgcacgtatccgctatcagccgctcctctgagcccgtgctggcagaggag
atcctgcgcaggtgcagtccagagatccgtggtggcgtcaggagggtgggcagcagtgcc
agcccacctccagcatttgtacctgacccccccaaggtaaagctgctgttcagggacgag
gtagtccctcccaggggggttatagggtcgtacgagcccccctccagccgaggctacgac
tcccactcctccagccctgccagcgacccccctcctctccctcgcaccctcaactccttc
ggcaaggccaagcccctggcacctccccccatcgccctcaaaccctcctataatacccag
gacaccaccagcagcacagccccatacacaacagcctttaggggcccggagcagccaggg
gagagccttgaggaccccagcctcaagtcgttcctggggaagatcaaggcctttgagaag
atggaccactttgcacgtgctcagaggatgctggagctgcaggaggcccagaacgccagg
ttggagatagctcagaagcacccagacatctatgctgtccctgtgaagacccaaaaactg
gatcacagccggcctcagcctataggttccagctcgcgtcccgagccccagacccctccc
tccaagctgccatactcggagagtcgtgggttctaccccagcgaagaggaagaggaagag
tgccgacgccagctggcagaccacaccaagagaggctactaccagaccaacaaccagaaa
taccaggacacagaactgtag
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