Coregonus clupeaformis (lake whitefish): 121585232
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Entry
121585232 CDS
T08357
Name
(RefSeq) ras GTPase-activating protein 1 isoform X1
KO
K04352
Ras GTPase-activating protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010
MAPK signaling pathway
cclu04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121585232
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121585232
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Gene cluster
GFIT
Motif
Pfam:
SH2
RasGAP
PH
C2
SH3_1
SH3_9
SH2_2
PH_11
PH_RASGAP
Motif
Other DBs
NCBI-GeneID:
121585232
NCBI-ProteinID:
XP_041757609
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Position
16:14777583..14823142
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AA seq
1095 aa
AA seq
DB search
MMAAEVSSEDTGSVSTGVAGGGGLETAHFPFYPKPTRVRVTDLGQGAAPNFRHQSNTSPD
SIPDMSMIYPVAGGDITGPVLSATGNGGSGHSISLGTNSGTIGGVCYSPTSEGAGSRMSP
TSAGPDGPSVFPPLPPPPPLPPGYGGLGTVDESDMQDGPEYEEEEVVFPLSAPPTNQWYH
GKLDRTIAEERLRQARTPGSYLIRESDRRPGSFVLSFLSMTSVVNHFRIIAMCGDYYIGG
RRFSSLSDLIGYYSYVSCLLKGEKLLSPVAPPEPVEDRRRVRAILPYTKVPETDEISFLK
GDMFIVHNELDDGWMWVTNVRTEEQGLIVEDLVKEVGREEDPHEGKVWYHGKISKQEAYN
LLMTVGQVCSFLVRPSDNTPGDYSLFFRTNENIQRFKICPTPNNQYMMGGRYYNSVDDII
DHYKKEQIVEGYNLKDAVSVQHQEQVLSDLVDGKEIYNTIRRKTKDAFYKNIVKKGYLQF
NKGKGKRWKNLYFILEGNDAQLIYFESEKRATKPKGLIDLSVCSVYGVHDSLFGRPNCFQ
VVVQHFSEEQYIFYFAGETPEQAQDWMKCLQTFCSNLRKPTQPTPNKRLRQVSSLVLYVE
EAHKLPVKHFTNPYCNIYLNNVQVAKTHPREGQNPVFTEEFIFDDLSSEINRFEISLSNK
TKKSKESDILFMRCQLSRLQKGQMIDEWFPLSSHVPLKGIEPGSLRVRARYSMEKIMPEE
EYSEFKELILLKEFHVIYALAHVCGQDRTLLASILLRIFRHEKTEAPLLRTLNDREINME
DEATTLFRATTLASTLMEQYMKATATPFVHHALKDTILKIMESKQSCELNPSKLEKNEDV
HLNLAHLLLILSELVEKIFMAAEILPPVNRLSSVIDDDVLIDDGCQSLSTPDDIVHRPNP
NKTLRYIYGCLQKSVQQKWPNTTMRTRVVSGFVFLRLICPAILNPRMFNIIADPPSATAG
RTLTLVAKSVQNLANLVEFGAKEPYMEGVNPFIKNNKHRMIMFLDELGNVPDLPEATEHF
RTDLSRDLAALHEICVSHSDDLRTLSNERGAQQHVLKKLLAITELLQQKQVHYAMSNSNR
TECTIMALAATIQVM
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgatggctgcggaggtcagtagtgaggacacaggctctgtctcgacaggggtggcaggc
ggcggaggcctcgagaccgcccattttccgttttatcccaagccgaccagagtacgggtc
actgatttgggccaaggagcagcaccaaacttccgccatcagtcgaacacctccccggac
tccatccctgatatgagtatgatttaccccgtggctggaggagatattaccggaccagtc
ttgtccgctacagggaatggtggtagcggacactcaattagtctaggaacaaactcaggg
accattggcggtgtgtgctactctcccacctcagagggagccggcagccggatgtcgccc
acctctgcgggtccggacgggcccagtgtcttccccccactaccaccaccacctccactg
cccccaggctacgggggactcggcactgtggatgaaagcgacatgcaggatggaccggaa
tacgaggaagaggaggtggtcttcccgctctcagcgccgcccactaaccagtggtaccat
gggaagctggaccggaccattgctgaggagcggttgcggcaggccaggacccctggcagc
tacctcatcagggagagtgaccgccggcccggctcctttgtcctgtccttcctcagcatg
accagcgtggtcaaccacttcaggataatcgccatgtgtggagactattacattggcggg
cgtcggttctcgtccctgtcggacctgattggttattacagctacgtgtcttgcctgctg
aaaggtgaaaagctgctatcgcccgtggcgcccccagagcctgtagaggacaggaggaga
gtgagagccattcttccatacaccaaagtgccagagaccgatgagatcagcttcctgaaa
ggggacatgtttatcgttcacaatgaactggatgacggctggatgtgggtgaccaacgtg
aggacggaggagcagggcctcatcgtagaggacctagtgaaggaggtgggacgggaggag
gacccacatgagggcaaagtctggtatcacggcaagatcagcaaacaggaggcctataac
cttctgatgacagttggtcaagtgtgcagcttcctggtgcggccgtcagacaacacaccc
ggggactactccctgttttttcgcaccaatgagaacatccaaaggtttaagatatgcccc
acccccaacaatcagtacatgatgggggggaggtactacaacagtgttgatgacattatt
gaccattataagaaagagcagatcgtggagggctacaacctgaaagatgctgtgtcagtg
cagcaccaggaacaagtgctctcagacttggtggacggcaaggagatatataacactatc
agacggaaaacgaaagacgcgttctacaaaaacattgtcaagaaaggctacctccaattc
aacaaaggcaaaggcaagcggtggaagaacctctacttcatcctggaggggaacgacgcc
cagctcatctactttgagagtgagaagagagccaccaaacccaaaggcctgattgacctg
agtgtgtgctctgtgtacggtgtgcacgacagtctgtttggcaggccaaactgtttccaa
gttgtggtccagcactttagtgaggaacagtacatattctacttcgctggcgagactcct
gaacaggcacaggactggatgaaatgtctgcagacgttctgcagtaaccttaggaaaccc
acccagcccactcccaacaagaggctccgacaggtgagcagcctggtcctgtacgtggag
gaggcccacaagctgcctgtgaagcacttcaccaacccctactgcaacatctacctgaac
aatgtgcaggtggccaagacccaccccagagagggtcagaaccccgtcttcacagaggag
ttcatctttgatgacttgtcgagtgaaatcaacaggtttgaaatcagcctgagcaacaag
acaaagaagagcaaagaaagtgacatcttgttcatgcgttgccagctgagccgcctgcag
aagggccagatgatagacgagtggttccctctgagctcccacgtgcctctgaagggcatc
gagccgggctccctgagggtgcgagcccgctactccatggagaagatcatgcctgaggag
gagtacagcgagttcaaagagctgatcctgctgaaggagttccatgtgatctatgctctg
gcccatgtgtgtgggcaggaccgcaccctgctggccagcatcctgctgcgtatcttcaga
cacgagaagacagaggccccgctactcaggacactcaacgaccgagagatcaacatggag
gacgaggcaacgaccctgttccgagcgaccacactggccagcacactgatggagcagtac
atgaaggccacggccacacccttcgtccaccacgccctcaaagacaccatcctcaagatc
atggagagcaagcagtcctgcgagctgaacccctccaaactggagaagaacgaggatgtg
catctgaacctggcccacctcctcctcatcctgtctgagctggtggagaagatcttcatg
gctgctgagatcctgccccctgtaaataggctttcgtctgtcatcgacgatgacgtcctc
atcgacgatggctgtcaatcattgtcgacacccgatgacatcgttcatcggcccaaccct
aataaaactctaagatatatctatgggtgtctacagaagtcagtgcagcagaaatggccc
aacaccaccatgagaacccgggtggtcagtggctttgtgttcctgagactgatctgtcct
gccatcctcaacccaagaatgttcaacatcatcgctgaccctccctctgcaacagcggga
cgtaccctcactctggttgccaagtctgtccagaacctggctaacctggtggagtttggt
gctaaggagccctacatggagggagtgaaccccttcatcaaaaacaacaaacatagaatg
atcatgtttctggatgagttgggtaatgtccctgacctccctgaagctacagagcacttt
aggacagacctgtcccgcgacctcgctgccctgcatgagatctgtgtctcacactcagac
gacctccgcaccctgagcaacgagaggggagcacagcagcacgttctgaaaaagctgctg
gccatcactgagctccttcagcagaaacaggttcactatgccatgtccaacagcaacagg
actgagtgcaccatcatggcattggctgccaccatccaggtaatgtga
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