Coregonus clupeaformis (lake whitefish): 121585306
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Entry
121585306 CDS
T08357
Name
(RefSeq) F-box/LRR-repeat protein 4 isoform X1
KO
K10270
F-box and leucine-rich repeat protein 4
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cclu04121
]
121585306
03029 Mitochondrial biogenesis [BR:
cclu03029
]
121585306
Ubiquitin system [BR:
cclu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121585306
Mitochondrial biogenesis [BR:
cclu03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
121585306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
F-box-like
F-box
LRR_At5g56370
LRR_Zer-1
F-box_4
LRR_8
LRR_14
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
121585306
NCBI-ProteinID:
XP_045072948
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MLTLLSMFYYICLRRRSRSGTRGEALTSRRAVESGQRATLPISVEVEQYAKEVLDFSSHY
GSENSMSYTMWNLAGVPNVYPSSGDFTQTAVFRAYGTWWEQCASAPLPFRRTPKAFHSQD
YIELAFEEPVYPTAVEVLETYHPGAIVQIMACSLNPFSQNPPTDIRGVPLSLSVPRWEVL
WAGEPTKVLTPQARQFSPSIKQLSFPTNLIRVEVNSSLLKYYTELDAVVLRGQRERPILS
LYKMPRIDICDLSDSDEELSDPGASFRQAGDGKHINLGNGYFDKLPYELIQLIVSHLTLP
DLCRLAQTCKLLHQHCCDPLQYIQLSLQPYWARLSDTSLGQLQGRCTLLQRLNLSWTGNR
GALTLTGFSSFMKACGGSLVCLELSCCHFLSEPCLEVISQTCPGLQELNLSSCDRLHPQA
FTHISKLTHLRRLVLYRTKIEQTVMLSILTFCIELRHLNLGSCVMIEDYDVVASMLAVRC
RSLRSLDLWRCRNLTERGLAELAAGCRLLEELDLGWCSTLQSSSGCFQHLARNLPCLRKL
FLTANRTVCDSDIEELAANCPALQHLDILGTRMVSSSSLRKLLQACPKLLLLDVSFCSQV
DARIVQELCGLFPNVAIKKSFTQ
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgctaacccttctgagcatgttttactatatctgtctgcggcgccggtccaggagcgga
actcggggtgaggcgctgaccagcaggcgggccgtggagtcaggccagcgggccaccctg
cccatcagcgtggaggtggaacagtatgccaaagaggtgctggacttcagctcccactac
ggcagtgagaacagcatgtcgtacaccatgtggaacctggccggcgtgcccaacgtctac
cccagctctggggacttcacccagacggccgtgttcagggcctacgggacgtggtgggag
cagtgtgccagcgcgccgctgcccttccgccgcacgcccaaggccttccacagccaggac
tacatcgagctggccttcgaggagcccgtctaccccacagccgtggaggtgctggagacc
taccacccgggggccatcgtccagatcatggcctgctccctcaaccccttctcccagaac
cctcccacggacatcagaggtgtacctctgtctctgtctgtccccaggtgggaggtgttg
tgggctggggagcccaccaaggtgctgaccccccaggccaggcagttctcccccagcatc
aagcagctgagcttccccaccaacttaatccgcgtggaggtcaacagctccctgctaaag
tactacacggaactggacgccgttgtcctgcgaggccagagggagaggcccattctctcc
ctttataagatgcccaggatcgacatctgtgacctgagtgacagcgatgaggagttgtct
gacccgggagcttccttcagacaggccggggatggcaagcacattaacctggggaatgga
tacttcgacaaactgccctacgagttgatccagctgatagtcagccacctgaccttgccc
gacctgtgtcgcctggcccagacctgtaagctactccaccagcactgctgtgaccccctc
cagtacatccagctgagcctgcagccatactgggcccgcctcagtgacacctccctgggg
cagctgcagggtcgctgcaccctgctccagaggctcaacctctcctggactggcaaccgc
ggagccctcacccttactggcttcagcagcttcatgaaggcgtgtggcgggagcctggtg
tgtctggagctgtcgtgttgtcacttcctgagtgaaccgtgtctggaggtcatctcccag
acgtgtcccggcttgcaggagctcaacctgtcctcgtgcgaccgcctccacccccaggcc
ttcacacacatctccaagctcacccacctgcgccggctagtgctctaccgcacaaagata
gagcaaacagtcatgttgagcatcctaaccttctgcattgagctgagacacctcaacctg
gggagctgtgtgatgatagaggactatgacgtggtggccagcatgctggctgtccgctgc
cgctcactacgctccctggacctgtggcgatgcagaaacctgacggagcgtggcctggct
gagctggctgcagggtgcagactactggaggagctggacctgggctggtgctccacactg
cagagcagctctggctgcttccagcacctggcccgcaacctgccttgcctgaggaagctc
ttcctcaccgccaaccgcaccgtgtgcgactcagacatcgaggagctggctgccaactgc
cccgcactgcagcacctcgacatactgggcacccggatggtaagctcctcctccctcagg
aagctgctgcaggcgtgtcctaagctcctcctcctggatgtgtccttctgctcgcaggtg
gacgcccgcatcgtccaagagctttgcggactcttccccaacgtggccatcaagaagagc
tttacccagtga
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