Coregonus clupeaformis (lake whitefish): 121585488
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Entry
121585488 CDS
T08357
Name
(RefSeq) C-X-C chemokine receptor type 3-like
KO
K04188
C-X-C chemokine receptor type 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121585488
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cclu04030
]
121585488
04050 Cytokine receptors [BR:
cclu04050
]
121585488
04090 CD molecules [BR:
cclu04090
]
121585488
G protein-coupled receptors [BR:
cclu04030
]
Rhodopsin family
Chemokine
CXC Chemokine
121585488
Cytokine receptors [BR:
cclu04050
]
Chemokine receptors
CXC Chemokine
121585488
CD molecules [BR:
cclu04090
]
Proteins
121585488
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
TrbC
7TM_GPCR_Srw
DUF8074
Motif
Other DBs
NCBI-GeneID:
121585488
NCBI-ProteinID:
XP_041757764
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All DBs
Position
17:28584194..28586552
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AA seq
376 aa
AA seq
DB search
MALDLRGIFQENSTYNYDEDYVYKEDCSSEDGVGVRFGVVFLPMLYSLMLVLGLLGNGLV
LVVLVQKRRSWSVTDTFILHLGVADTLLLLTLPLLAAQAAGGWRFGTPLCKITGAMFTIN
FYCGIFLLACISLDRYLSVVHAVQMYSRRKPWMVQASCLSVWLLSLLLSIPDWHFLESVR
DTGRDKVECVHNYPSLSQSGFDWRLASRLLYHTVGFLLPSAVLLFCNSCILLRLQRGSQG
LQKQRAVRVILALVLVFFLCWTPYNITLMVDTFQGRPGESDSESCENGRKALENILVVTF
ALACLHACLNPVLHLGLCRNFRRRVLDMVRCVERVQDDPNLSLWDSGVVEDSPDQAEEKG
TLNPMTPMGQVQSTQS
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggctttggacctgcgagggatattccaagagaatagcacctataactatgatgaggac
tatgtttataaagaagactgctcctctgaagatggcgttggggtacgttttggcgtggtg
ttcctcccgatgctctactccctgatgctagtcctggggctgctgggtaacgggctggtc
cttgtggttctggtccagaagaggcggagctggagcgtgacagacaccttcatcctgcac
ctgggtgtggccgacaccctgctgctgctcacgttgcccctcttggctgctcaggctgct
gggggatggcgctttgggacacccctctgcaagatcactggagccatgttcacaatcaac
ttttactgtggtatcttcctgctggcctgcatcagtctggaccgctacctgtccgtggtc
cacgcggtccagatgtactctcgcaggaagccctggatggtgcaggccagctgcctgtcc
gtgtggctcctctccctcctcctttccatccccgactggcacttcctggagtctgtgagg
gacaccggacgagacaaagtggagtgtgtccacaactacccgtccctctcccagtctggc
tttgactggcgcctggcctcccgcctgctctaccacacggtgggcttcctcctcccctct
gccgtgctactcttctgcaactcctgcatcctgctgcggctgcagcgcggctcccagggc
ctccagaagcagagggccgtccgggtcatcctggccctggtgctggtcttcttcctctgt
tggacgccctacaacatcaccctcatggtggacacctttcaggggaggcctggggagtct
gattctgagtcctgtgaaaacgggaggaaagctctggagaacattctggtggtcacgttc
gctctagcctgcctgcacgcttgcctcaacccagtgctccatctcggcctgtgtagaaac
ttccggcgacgcgtgctggatatggtgaggtgtgttgagagggtgcaggacgatccgaat
ctctcactgtgggactcaggtgtggttgaagactcacctgaccaagcagaagagaagggg
acattgaacccaatgacccccatgggacaggtacagtccacccagagctga
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