Coregonus clupeaformis (lake whitefish): 121585595
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Entry
121585595 CDS
T08357
Name
(RefSeq) CMP-N-acetylneuraminate-beta-galactosamide- alpha-2,3-sialyltransferase 1-like isoform X1
KO
K00780
beta-galactoside alpha-2,3-sialyltransferase (sialyltransferase 4A) [EC:
2.4.3.2
2.4.3.4
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu00512
Mucin type O-glycan biosynthesis
cclu00533
Glycosaminoglycan biosynthesis - keratan sulfate
cclu00603
Glycosphingolipid biosynthesis - globo and isoglobo series
cclu00604
Glycosphingolipid biosynthesis - ganglio series
cclu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
121585595
00533 Glycosaminoglycan biosynthesis - keratan sulfate
121585595
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
121585595
00604 Glycosphingolipid biosynthesis - ganglio series
121585595
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cclu01003
]
121585595
Enzymes [BR:
cclu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.3 Sialyltransferases
2.4.3.2 beta-D-galactosyl-(1->3)-N-acetyl-beta-D-galactosaminide alpha-2,3-sialyltransferase
121585595
2.4.3.4 beta-galactoside alpha-2,3-sialyltransferase
121585595
Glycosyltransferases [BR:
cclu01003
]
Terminal extension
Sialyltransferase
121585595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_29
dGTP_diPhyd_N
Motif
Other DBs
NCBI-GeneID:
121585595
NCBI-ProteinID:
XP_041757852
LinkDB
All DBs
Position
17:complement(5681720..5738986)
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AA seq
346 aa
AA seq
DB search
MSLSKWRKIRAFTVFSCIVTFTTFLFSYTLRDPSLYFFKYAIRKSDSFFSKGQCGCRQCM
TELEDDPWFTERFNLSVHPLMSRRNSLLTDDTYRWWQWLQAEQEPANFSEVVEKLFQVIP
DADLYMDAGPERCRTCAVVGNSGNLKGSRYGALIDSNDVIIRMNMAPTSGFEEDVGSQTT
HHVMYPESAIDLDNTTSLLLIPFKTLDLQWITSALTTGSIKQSPSNAICKVRSSTYIPVQ
SRIKANKNRVLIYSPTFFKYVYDAWLESHGRYPSTGFLSLLFAIHICDKVNVYGFGADQY
GNWHHYWEENHQGGAFRHTGVHDADYEYNVTLLLAEKHKIKIFKGF
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtctctatcgaagtggaggaagatcagggcatttactgtgttttcctgcattgtaacg
ttcaccacgttcctcttcagttacacgttgagagatccctctctgtacttcttcaaatac
gccatccgcaagtcggacagcttcttctctaagggccagtgtggctgtcgacagtgtatg
actgagctggaggacgacccctggttcactgagcggttcaacctgtcggtccaccctctg
atgtctaggaggaacagcctgctgactgacgacacataccgctggtggcagtggttgcag
gcagagcaagagccggccaacttcagcgaggtggtggagaagttgttccaggtcatccct
gatgctgacctttacatggacgcgggccctgagcgctgtaggacctgtgctgtggtgggg
aactcagggaacctcaagggctcccgctacggagccctcatcgactccaatgatgtcata
atcagaatgaacatggctcctacctctggctttgaggaggatgttgggagccagactacg
catcacgtcatgtacccagagagcgcaatagatctggacaacaccaccagcctcctgctc
atccccttcaagactctggacctgcagtggatcaccagtgccttgaccacaggctccatc
aaacaatcacccagtaatgctatctgcaaggttagatccagcacgtacattcctgtccag
tccaggattaaggcaaacaagaatagggtgttgatatacagcccgaccttctttaaatat
gtgtatgatgcatggctggagagtcatggccggtatccctccactggcttcctcagcctg
ttgtttgccattcacatctgtgataaggtcaatgtgtacgggttcggagcggaccagtac
ggaaactggcaccactactgggaagagaatcaccagggaggagcattccgccacaccggg
gtgcatgatgcggactatgagtacaacgtcaccctacttctggccgaaaaacacaagatc
aagattttcaaaggcttctga
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