Coregonus clupeaformis (lake whitefish): 121586005
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Entry
121586005 CDS
T08357
Name
(RefSeq) glutamate receptor ionotropic, kainate 2
KO
K05202
glutamate receptor, ionotropic kainate 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04080
Neuroactive ligand-receptor interaction
cclu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121586005
04082 Neuroactive ligand signaling
121586005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cclu04040
]
121586005
Ion channels [BR:
cclu04040
]
Ligand-gated channels
Glutamate (ionotropic)
121586005
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Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
YebG
Motif
Other DBs
NCBI-GeneID:
121586005
NCBI-ProteinID:
XP_045081281
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Position
15:5156541..5288606
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AA seq
872 aa
AA seq
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MGGIFESIESGPSGAEELAFKFALNTINRNRTLLPNTTLTYDIQRINIYDSFEASRKACD
QLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQTKWKHQVSDNRDSFYVSLYPDFSSLS
RAILDLVHFFKWKTVTVVYDDSTGLIRLQELIKAPSRYNIRLKIRQLPADTKDAKPLLKE
MKRGKEFHVIFDCGHEMVAGILKQALAMGMMTEYYHYIFTTLDLFALDVEAYRYSGVNMT
GFRILNTENSQVASIIEKWSMERLQAPPKPDSGLLDGFMTTDAALMYDAVHVVAVAVQQS
QQITVSSLQCNRHKPWRFGNRFMALIKEAHWDGLTGRITFNRTNGLRTDFDLDVISLKED
GLEKIGTWDPPSGLNMTDHQKGKTSNVTDSLANRSLVVSTILVEPYVMFKKSDKPLYGND
RFEGYCIDLLRELASILGFTYELRLVEDGRYGAQDETTGQWNGMVKELIDHKADLAVAPL
AITYVREKVIDFSKPFMTLGISILYRKPNGTNPGVFSFLNPLSPDIWMYILLAYLGVSCV
LFVIARFSPYEWYNPHPCNPDSDVVENNFTLLNSFWFGVGALMQQGSELMPKALSTRIVG
GIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTRIEYGVVEDGSTMTFFKKT
KISTYDKMWEFMSSRKHSVMVKDIDEGIHRVLTSDYAFLMESTTIEFVTQRNCNLTQIGG
LIDSKAYGVGTPMGSPYRDKITIAILQLQEEGKLHMMKEKWWRGNGCPEDEKNKEASALG
VQNIGGIFIVLAAGLVLSVFVAVGEFIYKSKQNAQLEKRSFCSAMVDELRVSLKCQRRLK
HKPQPPVMVKTEEVINMHTFNDRRLPGKETMA
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaatattcgagtccattgagtcggggccgtcaggtgctgaggaactagccttt
aaatttgctttaaacacaatcaacaggaacagaaccctactgccaaacacaacgctaaca
tatgacatccaacggataaacatctacgacagcttcgaagcctccagaaaagcctgcgac
caactatctctgggggtggcggccatctttggcccctcccacagctcgtcggctaatgcg
gtccagtccatctgtaacgcgcttggcgtgccccacatccagaccaaatggaagcaccag
gtgtctgacaacagggactccttctacgtcagcctctacccagacttctcctctctcagc
cgggccattctggacctggttcacttcttcaagtggaagacggtcaccgttgtctatgat
gacagcacaggtcttattcggttacaggagctcataaaggctccgtctcgctacaacatc
cgcttgaagatccgccagttgccagcagacaccaaggacgccaagcctctcctcaaggag
atgaagagagggaaggagttccacgtcatcttcgactgtggccatgaaatggttgccggg
atcctaaaacaggctcttgctatggggatgatgacagagtattatcactacatcttcacc
acactggacctgtttgcgctggacgtggaggcctaccgttacagtggggtgaacatgact
ggctttaggatcctgaatacggagaacagccaagtggcctccatcatagagaagtggtcc
atggaacgcctgcaggccccgcccaaacctgactctggcctactggacggcttcatgacg
acggacgctgcgctcatgtacgatgccgtgcacgtggtggccgtggccgtgcagcagtct
cagcagatcactgtcagctccctacagtgcaacagacacaaaccctggcgctttgggaac
agattcatggccctcatcaaagaggcccactgggatggcttgactgggcggatcactttc
aacagaaccaacggcttgaggacagactttgacctggatgtgattagtctgaaggaggat
ggactggagaagattggaacatgggaccctcctagtggcttgaacatgacagaccaccag
aaggggaagacatccaacgtcacagactccttagccaacagatctctagttgtctccacc
atattggtggagccctatgtgatgttcaagaagtcggacaagcccctttacggtaatgac
cgctttgagggctactgcatcgacctgctgagggagctggctagcatcctggggttcacc
tacgagttacgtctggtggaggatggccgctacggggcccaggacgagaccacgggccag
tggaacggcatggtcaaggagctgatcgaccacaaagctgatctggcagtggctcccctg
gccatcacctatgtgagggagaaggtcatcgacttctccaagcccttcatgacgctgggg
ataagtatcctctaccgcaaacccaacggaaccaaccctggggtcttctccttccttaac
cccctctcacccgatatctggatgtatattctgctggcttacttgggtgtcagttgtgtg
ctgtttgtcatagccaggtttagtccctacgagtggtataacccccacccctgcaacccc
gactcggatgtagtggaaaacaatttcaccctgctaaatagtttctggttcggagttgga
gctctcatgcagcaaggctctgagttaatgcccaaagccctgtccaccaggatcgtagga
ggcatctggtggttcttcaccctgataatcatctcttcctacacggccaacctggctgcc
ttcctcaccgtggagaggatggagtcgcccatcgactcggctgacgacctggccaagcag
accagaatagagtatggagtggtggaggacggatccaccatgaccttcttcaagaaaacc
aagatctccacatacgacaagatgtgggagtttatgagcagtcggaagcactctgtgatg
gtgaaagatattgacgaagggatccaccgagtcctcacctcggactacgccttcctcatg
gagtccactaccatcgagtttgtcacccagcgcaactgcaaccttacccagatagggggt
ctcatcgactccaaagcctacggtgtgggaacccccatgggctctccgtacagagacaag
atcaccatagcgatactgcagctgcaggaagaagggaaactgcacatgatgaaggagaag
tggtggagggggaacggttgtccggaggatgagaagaataaggaggccagcgctctgggg
gtccagaacatcgggggcatctttatcgtcctggcggctggactcgtcctgtccgtgttc
gtggcagtcggagagttcatctataagtccaaacaaaatgcacaactggaaaagaggtcc
ttctgcagtgccatggtggacgagttacgggtgtccctcaagtgccagcggcgcctcaaa
cacaagccccagccgcccgtcatggtcaagacagaggaggtcatcaacatgcacaccttc
aatgaccgcagactgccaggcaaagagaccatggcctag
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