Coregonus clupeaformis (lake whitefish): 121586205
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Entry
121586205 CDS
T08357
Name
(RefSeq) tyrosine-protein phosphatase non-receptor type 6-like isoform X1
KO
K05697
tyrosine-protein phosphatase non-receptor type 6 [EC:
3.1.3.48
]
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04148
Efferocytosis
cclu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121586205
09144 Cellular community - eukaryotes
04520 Adherens junction
121586205
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cclu01009
]
121586205
Enzymes [BR:
cclu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121586205
Protein phosphatases and associated proteins [BR:
cclu01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Non-receptor PTPs
121586205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
SH2
SH2_1
PTP-SAK
DSPc
Tc-R-P
Y_phosphatase3
PTPlike_phytase
PTP-NADK
DUF3536
Motif
Other DBs
NCBI-GeneID:
121586205
NCBI-ProteinID:
XP_041758658
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All DBs
Position
29:complement(54140871..54184562)
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AA seq
587 aa
AA seq
DB search
MSCGWFHRDISGVEAESVLKTRGVHGSFLARPSRKNQGDFSLSVRVGELVTHIRIQNTGD
FYDLYGGEKFATLSELVEYYTAENGILQDKDGTIIELKYPLNCSDPTTERWYHGHMSGPN
AEKLLWERDEPGTFLMRESLSKPGDFVLSVLTEEKSKASNRGRRVSHIKIMCQNDRYTVG
GKEMFDTLADLVEHYKHKGIEEMSGTWVHLKQPYFSTRVNAADIDSRVRLLDQTAERENE
GDKKSKAGFWEEFDALQKQETKVKKSREEGMRPENKSKNRYKNILPFDETRVILSSRDPN
IIGSDYINGNYLTNKLQEPCDQKVYIACQGCLATTVNDFWQMVWQENTRVIVMTTREVEK
GRNKCVPYWPEMQDFKDVGPYVVTNVSERDATDYKIRIMEISPLDQSDSVRTIWHYQYLS
WPDHGVPEEPGGVLSFLTQVNAKQEEFPDAGPMIIHCSAGIGRTGTIVVIDMIIETINTK
GQDCDIDIQKSIQMVRDQRSGMVQTEAQYKFIYLAVSQYIEASKVSMMAYNKGAETEYGN
LQFKHKPASRKVSKNKEQELYENQAKGRKDVKKQKSEEKKSGSVRKR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgtgggtggttccacagggatatctctggcgtggaggctgagtctgttttgaag
acccgaggcgtccatggcagcttcctggcccgacccagcaggaagaaccagggagacttc
tctctctctgtcagggtgggtgagctggtgacccacatccgtatccaaaacacaggggac
ttctacgacctgtatggaggggagaagtttgccacgttgtccgagctggtggagtactac
actgcagagaacgggatcctgcaggacaaagatggcaccatcatcgagctcaaatacccc
ctcaactgctccgaccccaccactgagaggtggtatcacggacacatgtcaggccccaac
gcagagaagttgctatgggaacgggatgagccgggcaccttcctgatgcgtgagtctctg
tccaaacctggagactttgttctgtctgttctgactgaggagaagagcaaggcatccaac
agagggaggagggtctcacacatcaagatcatgtgtcagaatgaccggtacacggtggga
gggaaggagatgtttgacaccctggcagacctggtggagcactacaaacacaaaggcatc
gaggagatgtctggaacctgggtgcacctcaaacagccctacttctccaccagagtgaat
gcagcagacattgacagcagagtgaggctgctggaccagacggcggagagagagaacgag
ggagacaagaagagcaaagcaggattctgggaggagtttgatgcccttcaaaagcaggag
acgaaggtgaagaagagcagagaagaagggatgagaccagaaaacaaaagcaaaaaccga
tataagaatatccttccctttgatgagaccagggtcattctgtcatctagagaccccaat
atcattggctcagattacatcaatggcaattatctgacaaataagctgcaggagccttgt
gaccagaaggtgtacattgcctgtcagggctgccttgcaacaactgtcaacgatttctgg
cagatggtgtggcaggagaacacaagggtcattgtcatgacaaccagggaggtcgagaag
ggacggaataaatgtgtgccatactggccagaaatgcaggacttcaaagacgtggggccg
tatgtggtcaccaatgtgtctgagagagatgccactgactacaagatcaggataatggag
atctcccctctggaccagtcggactcggtccgtactatctggcactaccagtacctgagc
tggcctgaccatggagttcccgaggagccaggaggggtgctcagcttcctcactcaggtc
aacgcaaaacaggaagagttccccgacgccgggcctatgatcatccactgcagtgctgga
ataggccgaactggcaccattgtggtgatcgacatgatcatcgagaccatcaacactaaa
ggtcaggactgtgacatagacatccagaagagcatccagatggtgcgagaccagcggtca
ggcatggtgcagactgaagcccagtacaagttcatctacctggccgtctctcagtacata
gaggcctccaaggtctccatgatggcctacaacaagggagctgagacagagtatgggaat
ttgcagttcaaacacaagcctgccagccgcaaggtctccaaaaacaaggaacaggaattg
tatgaaaaccaagccaaaggaaggaaagacgtgaagaagcagaaatcagaggagaagaag
agtggctcagtgagaaaaagataa
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