KEGG   Coregonus clupeaformis (lake whitefish): 121586213
Entry
121586213         CDS       T08357                                 
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1A
  KO
K03158  tumor necrosis factor receptor superfamily member 1A
Organism
cclu  Coregonus clupeaformis (lake whitefish)
Pathway
cclu04010  MAPK signaling pathway
cclu04060  Cytokine-cytokine receptor interaction
cclu04150  mTOR signaling pathway
cclu04210  Apoptosis
cclu04217  Necroptosis
cclu04920  Adipocytokine signaling pathway
cclu05132  Salmonella infection
cclu05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:cclu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    121586213
   04150 mTOR signaling pathway
    121586213
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    121586213
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    121586213
   04217 Necroptosis
    121586213
 09150 Organismal Systems
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    121586213
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    121586213
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    121586213
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04050 Cytokine receptors [BR:cclu04050]
    121586213
   04090 CD molecules [BR:cclu04090]
    121586213
Cytokine receptors [BR:cclu04050]
 Tumor necrosis factor receptors
  TNF receptor superfamily
   121586213
CD molecules [BR:cclu04090]
 Proteins
  121586213
SSDB
Motif
Pfam: TNFR_c6 Death Syndecan
Other DBs
NCBI-GeneID: 121586213
NCBI-ProteinID: XP_041758670
LinkDB
Position
29:53944442..53954889
AA seq 422 aa
MDILRGKWKEKCILNVCTLLVLCWSVDPSLSAPPPPPDRTQVESNHGNQELLCHEGSHYR
INGTCCGKCHEGFKLKEHCTKEGENSQCVPCEEGKTYLDRSNYVINCDKCTRCVDDEEEV
SPCKKSKNRECRCREGFYKNTIDTETRECLHCKKCGPGERKTQQCTPESDTVCECKDFYF
RDKKINRTCLQCKDCISADCQQECASSTHPNPNAKPQDTGWGVWSTYLLAVFGCVCVALL
VVVVIMGVLVVRWKLKGSSSFPSAEITSQGSEKSTRRLIQEDPENVLNQSIPSCSPVCEC
EQEPLNKLPDCVPKEIKISELIYSLLDQVSPRRVKELVRSLGVSDIVIERAENDHLRDTK
EAQYQMLSVWAKGRAQGGGGVLARPLLHDLLDKLRDMDLGGTAEELETKYGDQWREREMQ
TV
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggacatcttgagagggaaatggaaggaaaaatgcattctgaacgtttgcactctgctc
gtattgtgctggtcagtagacccctccctctcggcaccaccaccgcctcctgataggacc
caggttgagagtaaccatggaaaccaggagttgctatgccatgaggggagtcattaccgc
attaacgggacatgctgtggaaagtgccatgaagggtttaagctgaaggagcactgcact
aaagagggcgagaatagccaatgtgtcccctgtgaagagggcaagacgtatctagacagg
agtaactacgtcatcaactgcgacaaatgtacacgctgtgttgacgatgaggaagaggta
tcaccatgcaagaagagtaagaacagagagtgtcgctgcagagaaggcttctacaaaaat
acaatagacacagaaacacgggagtgcctccactgcaagaaatgtggacctggagagaga
aaaacacagcaatgtactccagagagcgacacagtgtgtgaatgtaaggacttctacttc
cgagacaagaaaatcaacaggacctgtcttcaatgcaaagattgtatatcagctgactgc
cagcaggagtgtgcttcaagcacacatcccaatcccaatgcaaaaccccaagacactgga
tggggtgtttggtctacctacctgttggctgtattcggctgtgtttgtgttgcgctactg
gtggtggtggttatcatgggcgtactagtggtccgatggaaactgaaggggtcgagctcc
ttcccctctgctgagatcacctctcagggctccgagaagtctactcggaggctgatccaa
gaggacccagagaatgttctcaaccagagtatcccttcatgtagcccagtgtgtgagtgt
gaacaggagcccctcaacaagctaccagactgtgtccccaaggagatcaagatctctgag
ttgatctactcgctgttggaccaagtctccccgcgtcgtgtgaaggagctggtgcgttcg
ctgggtgtgagtgacatagtgatagagcgggctgagaatgaccacctccgtgacactaag
gaagcccagtaccagatgctgagtgtctgggctaagggaagggcacagggagggggaggg
gtgctagcacgccctctactgcacgacctgctggataagctgagagacatggacctggga
gggactgcagaggagctggagaccaagtatggggatcagtggagagagagagagatgcag
actgtatag

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