Coregonus clupeaformis (lake whitefish): 121586420
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Entry
121586420 CDS
T08357
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121586420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cclu03036
]
121586420
Chromosome and associated proteins [BR:
cclu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
121586420
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
121586420
NCBI-ProteinID:
XP_041759017
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All DBs
Position
17:41728830..41741186
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AA seq
899 aa
AA seq
DB search
MMETDGDQNQGSTNGTTPSGLNSRPSQMNSMSLYERQAVQALQALQRQPNAAQYFQQLML
QQQINSAQLQNLAAVQQATLAASRQSSPPANSISQTTSTTVTSMNVTTSVGGAITSTRAI
GPGSSATSTISQSVLLGGNAAGQGQMYLRVNRSLRAPLSSQLIFMPGSTATTAMATVTKQ
PQTQQQQQQEITPTSSSNQSDNDQVQNLALRCLSSPKGVGVKTETPERGETATYSLIQSS
HQQFNQSTPQYTTKPTQQQQSHIKIPTYIQSSNANLSSLNLKTGNHHSNAPSSPSTSVPL
SQLLLSGPNFGRGGAITTVTSAATATHILVPTSNAPAQSHIYQVGAATIKPNVSTQTLVV
QPLQKSTINDKGGHGNGPVPIQPKTQQGLRMPLQLPSRNPPPILPAPPANNQTIATQPPP
HIPVQIVGARQSSIGNPQALALVQARNTCSQDGATLLSSSSSASLLTMVASIASREGGGI
SRGADLKSLQSAQEALPLAHISHVHAQANQNQSPGLNPNPNCTLAASISSQSQASRSSLT
LPLPLVEASSVSAVVAANGESMCSQPPQGKSMKRKSESVAANDEDGPPPPHLVPMSEHSP
ALSSSAMEAGPGPLSPSPSPSLSPALSVSRMGGGQGERAPPPQAVVKPHVLTHLIAGFVI
QEGAEPFPVSGPVKEAAGEDLAMDNPNASQPETVNTATVLKCEYCKSFAPARQFRGTKRF
CSLTCSKRYNVSCSQHYRLRQGGHLSHSDEDGVLRRRVPHRTSSEIASAKIAGRPLPVKC
RSESSRSEDVSSCGEEEDDPMSLSPASSSSCHQPPPTLRLEVSKASYFLPGSPAQWSVEE
VSQFISSLQGCEELAAHFLSQEIDGQALLLLREEHLMSTMNIKLGPALKICAHINILRD
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgatggagacagatggcgaccaaaaccagggctctaccaatggaaccactccgtcaggg
ctgaactcccgcccctctcaaatgaactccatgtccctgtacgagagacaggctgtgcag
gcccttcaggcgctgcagaggcagcccaatgcagcacagtacttccagcagctgatgctg
cagcaacagatcaacagtgcccagctacaaaacctggctgcagtacaacaggccaccctt
gctgccagtcgccagtccagccctcccgccaacagcatatctcagaccacaagcacaaca
gtcacatctatgaatgtaaccacttctgtgggaggggccataaccagcacccgcgctata
ggcccaggctcctccgcgacatccactataagccaatcagtgctgctgggtgggaacgcg
gcaggacagggacagatgtatctgagagtgaaccgatctctgagggctcccctctcctcc
cagctcatctttatgcctggtagcacggcaaccacggccatggcaacagtcaccaagcag
ccacagactcagcagcagcaacaacaggaaattacacctacttcctccagcaaccaatca
gacaatgaccaggtgcagaacctggctctgcgatgtctctccagtcccaagggggtcggg
gtcaagactgaaaccccagagaggggtgaaacagcgacctactcccttatccagtcatct
caccagcagttcaaccagtccactccacagtataccactaaaccaacccaacagcaacag
tcccacatcaagatccccacctacatccagagctccaacgccaacctgtcctctctcaac
ctcaagacgggcaaccaccactccaacgccccctcctcaccctccacctctgtcccactc
tcacagctcctcctctccggacccaactttggccggggtggggctatcaccacggtaacc
tctgccgccacggcgacgcacattctggtgcccacctccaatgcgcccgcccagtcccac
atttaccaggtgggtgctgccaccatcaagcccaatgttagtactcaaacgctggtggtt
cagcctctgcagaaaagcactattaacgacaaaggaggccatgggaacggtcccgttcca
atccagccgaaaactcaacaaggcctccgtatgcccctgcaactgccatcccgcaacccg
cctcccatcctccccgcaccccccgccaacaatcagactattgccacccagcctccgccg
cacatcccagtccagatagtaggggccaggcagagctccataggaaacccccaggctttg
gccttggtccaggcccggaacacctgttcccaggatggagctacccttctgagtagctcc
agcagcgccagcctcctcaccatggtggcctccatcgcttccagagagggaggggggata
agccgaggggcggatttaaagagccttcaatcagcccaagaagccctcccattggcccac
atctctcacgtgcacgcacaagccaatcagaatcagagccctgggctgaatccaaatcca
aattgcaccttggccgccagcatctcctctcagtcccaggcctcccgttcctccctcact
ttacccctgcctttggttgaggcgagcagcgtgtccgctgtagtggctgccaatggagag
tctatgtgttctcagcctccccagggtaagtcgatgaagaggaaatccgagtcagtcgca
gccaatgacgaagatggtccccctcctccccaccttgttccaatgagtgaacactcccct
gccctctcctcctccgccatggaagcaggccctggtccactttctccctccccctctccc
tctctttcccctgccctctcggtgtcccgtatggggggtggccagggggagagagccccc
cctccacaggctgtggtcaaaccccacgtcctcacccacctcatagcgggcttcgtcatc
caggagggagctgaacctttccctgtgagtgggccagtgaaggaggcagctggagaagat
ttggccatggacaatccaaacgccagtcagcctgagactgtgaatacagctacagtgctg
aagtgtgagtactgtaaaagcttcgccccagccagacagtttagagggactaagcgcttc
tgctcattgacctgttccaagaggtataatgtaagctgcagccagcactaccgcctgcga
caggggggtcacctctcccactctgacgaggacggggtcctaaggaggagggttccccac
aggaccagctccgagattgccagtgccaaaatagccgggagacccttaccagttaagtgc
cgctccgagtccagccgttcggaggacgtctccagctgcggggaggaagaggacgacccc
atgtccctctccccggcctcctcctcttcctgccaccagcctccgcccacactccgattg
gaggtctcgaaggcgtcctacttcctgcccggcagccccgcccagtggagtgtggaggaa
gtgtctcagttcatatcctctctgcaaggctgtgaggagctggcggcccatttcctgtcc
caggagattgacggacaggccctgctgctactcagagaggagcatctcatgtccaccatg
aacatcaagctcggtcccgccctcaagatctgtgcccacatcaacatcctgagagactga
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