Coregonus clupeaformis (lake whitefish): 121586447
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Entry
121586447 CDS
T08357
Name
(RefSeq) poliovirus receptor-like isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu03266
Virion - Herpesvirus
cclu04514
Cell adhesion molecules
cclu04520
Adherens junction
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
121586447
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121586447
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121586447
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121586447
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cclu04515
]
121586447
04090 CD molecules [BR:
cclu04090
]
121586447
Cell adhesion molecules [BR:
cclu04515
]
Immunoglobulin superfamily
Nectin family
121586447
CD molecules [BR:
cclu04090
]
Proteins
121586447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
C2-set_2
ig
V-set
Ig_2
I-set
TM_ErbB1
C2-set_3
DUF6338
DUF4342
Motif
Other DBs
NCBI-GeneID:
121586447
NCBI-ProteinID:
XP_041759064
LinkDB
All DBs
Position
17:complement(42741037..42821256)
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AA seq
519 aa
AA seq
DB search
MARDYAKQSPMMLLVTAGILLIIQAASCQRVRVRVVAEVEAYPTESVDLRCQFVDEGNTK
LTQVSWIWEPREGQRDNIAVFHPIYGESFPESPFNGRVSFIQGTLTNPSITITSLKMADA
GRFTCEYATYPSGNEQGTTNLVILAKPKNSASPVVVQASTSGKPVVVAQCEAADGKPAAT
IKWMGEVGGTENTTSKKVQDGTVTVRSEYLLVPTPEDNGKEVTCMISQRTQDKPQTFPMK
LSVEYPPTVSIVGYDNNWYIGRTDAVLTCQATGNPVPTTVTWTAMSGRMPDTVQIDANKL
IVRKVDEAVNTTFVCEVMNRLGVGKHQVTTAVIEAIADPSNAGVVAGAIIGSLLALLLVS
ALIAVLVNRSRRQRRGYPGNGEPGAYGNKARLFGGAGNKSEGTGANINGPIYTYRESDPG
ALVENVNDFHRHGPPGSTPTAHDILLSSEMDEAERRKFDALDDSLEEEEERYDSFSVGMA
PAYHIHRHNEEMGGVSMYLDDDMESQRDGSVISRTAIYV
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgagactacgctaaacaatcaccaatgatgttgttggtgacagcagggatactt
ctgattattcaagctgcgtcgtgtcagcgggtgagggtgagggtggtggcggaggtggag
gcataccccaccgagtcggtcgacctgcgctgtcagtttgtcgatgaaggaaacaccaag
ctcacacaggtgtcgtggatatgggagcccagggaaggccagagggacaacattgcggtc
tttcaccccatatacggcgagagcttccccgaatctcccttcaacgggcgtgtcagcttc
atccaaggcaccttgacaaacccctccattaccatcaccagcctcaagatggccgacgcc
gggcggttcacctgcgagtatgccacttaccccagcggcaatgagcaaggcaccaccaat
ctggtcatacttgcgaaacccaagaattctgcatctcccgttgtcgtccaagccagcacc
agcggcaaaccagtggtcgtggcccagtgtgaggcggccgacggcaagccagcagccacc
atcaagtggatgggagaagtcggtggcaccgaaaacaccacctccaaaaaagtgcaggac
ggcacggtgacggtgaggagtgagtacctcctggtgcccacgcccgaggacaacggcaag
gaggtcacctgcatgatcagccagcgcactcaggacaagccgcagacctttcccatgaag
ctgtccgtcgagtatcccccaactgtgtccatagtgggctatgataacaactggtacatt
ggccggaccgacgctgtcctgacctgccaggccactggcaaccctgtccccaccaccgtc
acttggacagccatgtccggtcgcatgcctgacacggtgcagatcgacgccaacaagctg
atcgtgcggaaggtggacgaggctgtgaacaccaccttcgtatgcgaggtgatgaaccgg
ctgggagtgggcaagcaccaggtcaccacagcggtcatcgaggccatagcggacccgtcc
aacgcgggtgtggtggcgggggctatcatcggcagcctgctggccctgctgctggtcagt
gcgctgattgctgtcctggtgaaccgcagtcgccggcaacggcgcggttaccccggcaat
ggagagccaggcgcctacgggaacaaagcccgcctcttcggcggagctggcaacaagagc
gaaggcacgggggccaacatcaacgggcccatctatacgtaccgcgagagtgaccccggc
gcgctggtggagaatgtcaacgacttccaccgccatggcccgccaggctccacccccacc
gcccacgacatcctgctgagcagcgagatggacgaggcagagcgcaggaagttcgacgcc
ctcgacgacagcctggaggaggaagaggagcgctacgacagctttagcgtgggcatggcg
ccagcttatcacatccaccggcacaacgaggagatgggaggggtcagcatgtacctggac
gacgacatggagtcacagcgagacgggtcggtcatctcccggactgccatctacgtctag
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