Coregonus clupeaformis (lake whitefish): 121586903
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Entry
121586903 CDS
T08357
Name
(RefSeq) integrator complex subunit 3 isoform X1
KO
K13140
integrator complex subunit 3
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cclu03041
]
121586903
Spliceosome [BR:
cclu03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
121586903
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ints3_N
HEAT_Ints3_C
Motif
Other DBs
NCBI-GeneID:
121586903
NCBI-ProteinID:
XP_041759875
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Position
17:complement(45201132..45224654)
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AA seq
1033 aa
AA seq
DB search
MEPSPAKGKLQGRLLVSTTLDAKDELEERLERCVGIVTSLTNGLSEREANDAITANVCKG
PQQHEEVCLGLFALLLTEPPQAQRCYRDLTLVNRDGMNVILIKINQILMEKFLKLQDVCR
TQLVWLVRELVKSGVIGADGVLMTLMKQIAGGDITNKNLWLAENVLDILVDQREWVLKSG
MLIAMSVYTYLRLIVDHGTPAQLVLRQKEVDFCIGLLREKFMECFIIGRDLVRLLQIVAR
IPEMELLWKDLLHNPQALSPQFTGKGLLQLLTARTSRKFLACRLTPDMETKLLFMTSRVR
FGQQKRYQDWFQRQYLSTAESQSLRCDLIRYICGVVHPSNEVLSSDILPRWAIIGWLLTT
CTSNVAASNAKLALFYDWLFFSPEKDSIMNIEPAILVMHHSMKPHPAITATLLDFMCRII
PHFFPPLEGQVRQGVFNSLTFIMEKRVLAHLAPLFDNPKLDRELRSMLRERFPEFCSSPS
PPTEGRDEGTNEMKMEESVSLEMDNHVLLDKEDGCYDNTEAAFSDDEEEINSKGEGNKKR
EFRFHPIKEAIIEEPADITPYVDQLDDMMKEKVLQLQKGSDTETHCEVMQEIVDLILEED
FDSEQMSTLASCLAELFKGHFRGDVLPDEITEESLEESVCKPVCLVFRNLCQMQEDNSGF
SVLLEMLAELYQKQPKIGYHLLYYLKASKAAMGKMSLYESFAQATALGDLHTCLMMDMKA
CQEDDIRLLCYLTPSIYTEFPDETLRSGELLNMIVAVIDSTQLQELMCHVMIGNLVMFRK
DSVLNILIQSLDWETFEQYSTWQLFLAHSIPLETIIPILQHLKYKEHPEALSCLLLQLRR
EKPSGEMVKMVLSRPCHQEDQFTTSILRHWAAKHDDVLGEHIKALLIKNNNLPRKRQSLR
SSSSKLAQLTLEQILEHMDNLRLNLSNTKNSFFTQTPILQALQHVQASCDESHKMRFSDL
FSLAEEYEEPSSKPPKSRRKAPASSPRSRKGAATPVSNEEESASSSASEEEDSKPKAPKR
KRKGSSAVASDSD
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggagccttcaccggcaaaggggaaactgcagggtcgcctattggtgtccacgaccctg
gacgcaaaagatgagctggaggagcggttggagaggtgtgtggggatcgtcacttcattg
acaaacggcctgtcggagcgcgaagccaacgatgccatcacagcaaatgtgtgtaagggc
ccccagcagcacgaggaggtgtgtctgggactcttcgctctgctgctcacagagcccccg
caggcacagaggtgctacagagacctgaccctggtgaatagggacggcatgaacgtgatc
ctgatcaagatcaaccagatcctcatggagaagttcctcaagctgcaggacgtctgccgc
acacagttggtgtggttggtgagggagctggtgaagagtggcgtgattggagcggacggc
gtcctcatgacccttatgaagcagatcgcaggaggagacatcaccaataagaacctgtgg
ctggctgagaacgtactggacatactggtggatcaaagggagtgggtgctgaagagtggc
atgctgatagccatgtcagtgtacacctacctgcgcctcatcgtggaccacggcaccccg
gcgcagctggtcctcagacagaaggaggtggacttctgtatcggcctgctccgagagaag
tttatggagtgttttatcattgggagagacctggtgcgtctgctgcagattgtggcccgt
ataccagagatggagctactgtggaaagatctgctccacaacccccaggccctgagccct
cagttcactggtaagggcttgctgcagctcctgaccgctcgcacatcccgaaagttcctg
gcttgtcgcctcacaccagacatggagaccaaactgctcttcatgacctccagggtgcgt
tttggccagcagaagcgctaccaagactggttccagagacagtacctgtccacggcagag
agccagtcgctgcgctgcgacctgattcgctacatctgcggcgttgtgcacccgtccaat
gaggtgctgagctccgacattctaccccgctgggctatcattggctggctgctcaccacc
tgcacgtctaacgtggcggcctccaacgccaagctggccctgttctacgactggctcttc
ttcagcccagagaaggacagcatcatgaacatagagcctgccatcttagtgatgcatcac
tccatgaagcctcatccagccatcactgccaccctactggacttcatgtgtcggatcatc
cctcactttttcccccctctggaggggcaggtgcggcagggtgtcttcaactctctcacc
ttcatcatggagaaaagagtgctggctcacctagcccctctgtttgacaaccccaaattg
gaccgggagctgcgctccatgctgagggaacgcttcccagagttctgcagttccccctca
ccccccaccgagggaagggatgaaggtacaaatgaaatgaaaatggaggagtctgtttcc
ttggagatggacaatcatgtgttgctggacaaggaggacggttgctacgacaacacagag
gctgccttcagcgacgatgaggaggagattaacagcaagggtgagggaaataaaaagcgg
gagttcagattccacccaatcaaagaggccattattgaggagcccgctgacatcactccc
tacgtggaccaattggacgacatgatgaaggagaaggtcttgcagttacagaaaggaagt
gacacagagacacattgtgaagtcatgcaggagatagtggacctgatcttggaggaggac
tttgactcagagcaaatgtccactctggcctcctgtctggccgagctcttcaagggccac
ttcagaggagacgtgctgcccgacgagatcacagaagagtcgctggaggagtctgtgtgt
aagcctgtgtgcctggtgttcaggaacctgtgtcagatgcaggaggacaacagtggcttc
tcagtgctgctggagatgctggcggagctctaccagaaacagcccaagatcggctaccac
ctgctctactacctcaaggccagtaaagcggcgatggggaagatgagtctgtacgagtct
tttgcccaggccacggcgctgggagacctgcacacctgtctgatgatggatatgaaggcc
tgccaggaggacgacatcaggctgctctgctatctcacaccatccatctacactgagttc
ccagatgagacattgcgcagcggcgagctactcaacatgattgtagccgtcatcgattca
acacagctgcaggaactgatgtgtcacgtgatgattggcaatctggtgatgttccgcaag
gactctgtcctcaatatcctcatccagtctctggattgggagacgtttgagcagtacagc
acctggcagctcttcctggcccacagcatcccactggagaccattatccccatcctgcag
cacctcaagtacaaagaacacccagaagcactctcctgtttgctgttgcaactacgcagg
gaaaagcccagtggggagatggtgaagatggtgctgagtcggccctgccaccaggaggac
cagttcaccaccagtatcctgcgccactgggcagccaagcacgacgatgtcctgggggaa
cacatcaaagccctgctcatcaagaacaacaacctgccacgcaaacgccagagtctgcgc
agctccagcagtaaactggcccagctgaccctggaacagatcctggagcacatggacaac
ctgaggctgaacctcagcaacaccaagaacagcttcttcacacagacgcccatcctgcag
gcactgcagcacgtccaggccagctgtgacgagtcccacaagatgagattcagcgacctc
ttttcattggccgaggagtatgaagagccctcctccaagcctcccaagtcacggcgcaag
gcccccgcttcctccccacggtcgcgtaagggagctgccacccctgttagcaacgaggaa
gagagcgcgtccagcagtgcctcggaggaagaggactccaaacccaaagctcccaagagg
aagaggaaaggctcatctgcggtggcctcggacagcgactga
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