Coregonus clupeaformis (lake whitefish): 123491402
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Entry
123491402 CDS
T08357
Name
(RefSeq) H-2 class I histocompatibility antigen, Q9 alpha chain-like
KO
K06751
MHC class I antigen
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
cclu04145
Phagosome
cclu04218
Cellular senescence
cclu04514
Cell adhesion molecules
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
123491402
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123491402
04145 Phagosome
123491402
09143 Cell growth and death
04218 Cellular senescence
123491402
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
123491402
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
123491402
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
123491402
Exosome [BR:
cclu04147
]
Exosomal proteins
Proteins found in most exosomes
123491402
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
Antigens
123491402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Psg1
ig
C2-set_3
PepSY_TM
Phage_holin_3_6
Ig_2
EphA2_TM
DUF202
TMEM154
MFE-2_hydrat-2_N
Motif
Other DBs
NCBI-GeneID:
123491402
NCBI-ProteinID:
XP_045078024
LinkDB
All DBs
Position
8:complement(56105677..56128349)
Genome browser
AA seq
365 aa
AA seq
DB search
MEGCILLVLGIGLLHTASAVTHSLKYFYTASSEVPNFPEFVVVGMVDDVQMVHYDSNSQR
AVPKQDWMNKRTDTQYWERETGNFLGSQQTFKIDINTLKQRFNQSGGVHTWMRMYGCEWD
EDTRVTEGFDQFGYDGEDFVAFDLKTKTWIAPTPQAVITKHKWDRNMGFNENMNNYLTQT
CIDWLKKYLDYGKSTLMRTVPPLVSLLQKTPSSPVTCHATGFYPSGVMVFWQKDGQEQHE
DMENGETLHNIDGTFQKSVHLTVTPDKWKNNKYQCVVQVTGIKEDFIKVLTESEIQTNWG
KTNRGANDPNTTGSALIIGVVVALLAVVAVVVGVVIWKKKSKKGFLPTSTSDTDSDNSGK
GVQKT
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggagggttgtatcttgctggtgctgggaataggccttcttcatacagcatctgctgtg
actcactccctgaagtatttctacaccgcatcttctgaagttcccaacttcccagagttt
gtggttgtggggatggtggatgatgttcagatggttcactatgacagcaacagccagaga
gcggtgcccaaacaggactggatgaacaagcggacagacacacagtactgggagagggag
acagggaattttttgggttcccaacagactttcaaaatcgacatcaatactctaaagcag
cgttttaaccaaagtggaggtgtgcacacatggatgaggatgtacggctgtgagtgggat
gaggacactagagtcacagaggggtttgatcagtttggatatgatggagaggatttcgta
gcatttgacctgaagaccaagacatggatcgccccaacaccacaggcagtcatcaccaaa
cacaagtgggacagaaacatgggtttcaatgagaacatgaacaactacctcacccagacc
tgcattgactggctgaagaagtatctggactatgggaagagcactctgatgaggacagtc
cctcccctagtgtctctgctccagaagaccccctcctctccagtgacctgccacgctaca
ggtttctaccccagtggagtcatggtgttctggcagaaagatggacaagagcagcatgaa
gatatggagaatggagagactctccacaacattgatggaaccttccagaaaagcgtccac
ctcacagtgacacctgacaagtggaagaacaacaagtatcagtgtgtggttcaggtcact
ggtatcaaggaggacttcatcaaggttctgactgagtctgagatccagaccaactgggga
aagactaacaggggtgcaaatgacccaaacaccactggctccgccctcatcattggagtg
gttgtagctctcctggccgttgttgctgttgttgttggggtcgtcatttggaagaagaag
agcaagaaaggctttcttccaaccagcacttccgacactgactctgacaactctgggaaa
ggtgtccaaaagacttga
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