Coregonus clupeaformis (lake whitefish): 123491404
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Entry
123491404 CDS
T08357
Name
(RefSeq) major histocompatibility complex class I-related gene protein-like
KO
K06751
MHC class I antigen
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
cclu04145
Phagosome
cclu04218
Cellular senescence
cclu04514
Cell adhesion molecule (CAM) interaction
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
123491404
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123491404
04145 Phagosome
123491404
09143 Cell growth and death
04218 Cellular senescence
123491404
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
123491404
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
123491404
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
123491404
Exosome [BR:
cclu04147
]
Exosomal proteins
Proteins found in most exosomes
123491404
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
Antigens
123491404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MHC_I
C1-set
Psg1
C2-set_3
TMEM154
ECSCR
Rv3627c_N
PIMMS43_C
SP_C-Propep
Toxin_SdpC
RIFIN
GEX3_C
F59B103_C
Motif
Other DBs
NCBI-GeneID:
123491404
NCBI-ProteinID:
XP_045078026
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All DBs
Position
8:complement(56182257..56196428)
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AA seq
366 aa
AA seq
DB search
MKGCILLVLGIGLFHTASAVTHSLKYFYTTSSEVPNFPEFVAVGMVDGVQMVHYDSNSQR
AVSDQDWINKQTDTQYWEREKGNLLGSQQIFKIDINTLLQRFNQSGGVHVFQKMYGCEWD
DESGATEGFNQFGYDGEDFVALDLKTETWIAPTPQAVITKHKWDNVRENTMHWKNYHTQT
CIEWLKKYLDYGKSTLKRTVPPLVSLLQKTPSSPVTCHATGFYPSRVMVFWQKDGHDQHE
DVEYGETLHNDDGTFQKSTYLKVKSEERKNNKYQCVVQVTGIKEDFIKVLTESEIQTNWG
KTNRGANTIGFIGVALLVIVVVVVVVVVVGVIIWKKKNKSKKGVRRERPLSIVICRIHCH
LRYYQL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaagggttgtatcttgctggtgctgggaataggcctttttcatacagcatctgctgtg
actcactccctgaagtatttctacaccacatcttctgaagttcccaacttcccagagttt
gtggctgtggggatggtggatggtgttcagatggttcactatgacagcaacagccagaga
gcagtgtctgatcaggactggataaacaagcagacagacacacagtactgggagagggag
aaagggaatttactgggttcacagcagattttcaaaatcgacatcaatactctattgcag
cgttttaaccaaagtggaggtgtgcatgtttttcagaagatgtacggctgtgagtgggat
gatgaatctggagccacggaggggtttaatcagtttggatatgatggagaggattttgtg
gcattggaccttaagacagaaacatggatcgccccaacaccacaggcagtcattactaaa
cacaagtgggacaatgtcagagaaaatacaatgcactggaaaaactaccacacccaaacc
tgcattgagtggctgaagaagtatctggactatgggaagagcactctgaagaggacagtc
cctcccttagtgtctctgctccagaagaccccctcctctccagtgacctgccacgctaca
ggtttctaccccagcagagtcatggtgttctggcaaaaagacggacatgaccaacatgaa
gatgtggagtatggggagactctccacaacgatgatggaaccttccagaaaagcacctac
ctcaaagtgaagtctgaggagaggaagaacaacaagtatcagtgtgtggttcaggtcact
ggtatcaaggaggacttcatcaaggttctgactgagtctgagatccagaccaactgggga
aagactaacaggggtgcaaacaccattggcttcattggagtagctctcctggtcatcgtt
gttgttgttgttgttgttgttgttgttggggtcatcatttggaagaagaagaacaagagc
aagaaaggtgtgaggagagaaagacctctttctattgtcatatgtaggatacactgtcat
cttagatattatcagctgtga
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integrated database retrieval system
