Coregonus clupeaformis (lake whitefish): 123492872
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Entry
123492872 CDS
T08357
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain-like
KO
K06751
MHC class I antigen
Organism
cclu
Coregonus clupeaformis (lake whitefish)
Pathway
cclu04144
Endocytosis
cclu04145
Phagosome
cclu04218
Cellular senescence
cclu04514
Cell adhesion molecules
cclu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cclu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
123492872
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
123492872
04145 Phagosome
123492872
09143 Cell growth and death
04218 Cellular senescence
123492872
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
123492872
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cclu04147
]
123492872
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
123492872
Exosome [BR:
cclu04147
]
Exosomal proteins
Proteins found in most exosomes
123492872
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cclu00537
]
Antigens
123492872
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
C2-set_3
ig
Ig_2
Motif
Other DBs
NCBI-GeneID:
123492872
NCBI-ProteinID:
XP_045082304
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All DBs
Position
17:42929199..42954059
Genome browser
AA seq
357 aa
AA seq
DB search
MKCFILLLLGISLHATCAATHSLRYVYTATSGIPDFPEFVTVGLVNGEPVSYYDSVIRRE
TPRQEWIKEAVGPDYWNRNTQSSIGAEQTFKANIDIAKHRFNQTGGVHIVQNMYGCEWDD
ETGVTEGFDQFGYDGEDFIAFDLKTLTWIATMPQALVTKHKWDSDKAFNEQNKHYLMQTC
IEWLKKYLDYGKSTLKRTVPPSVSLLQKTPSSPVTCHATGFYPSGVMVFWQKDGHDEHED
VEHEETLPNDDGTFQKSTHLTVTPEEWTKNKYQCVVQVTGIMEDFIKVLTEPEIKTNWGK
TNITSDVGSNSSTTLLQRNELSLSLIKQERSTEKRRKTVNSSILSQSNVHPATDTFL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtttcatccttctgctcttaggcataagccttcatgctacatgtgcagctacg
cattcactgcgttatgtgtacactgcgacctccggaataccagacttcccagagtttgtg
actgttgggttggtgaatggagagcccgtgtcatattatgacagcgtcatccgcagagaa
actcccagacaggagtggataaaagaagcagttggccctgattactggaatagaaacact
cagtcctccattggtgccgagcagaccttcaaagccaacattgatattgccaagcatcgc
ttcaatcagactggaggtgtgcacattgtccagaacatgtacggctgtgagtgggatgat
gagactggagtcacagaggggtttgatcagtttggatatgatggagaggatttcatagca
tttgacctgaaaacattgacatggatcgctacaatgccacaggcacttgtcaccaaacac
aagtgggacagtgacaaggctttcaatgagcagaacaaacactacttaatgcagacctgc
attgagtggctgaagaagtatctggactatgggaagagcactctgaagaggacagttcct
ccttcagtgtctctgctccagaagaccccctcctctccagtgacctgccacgctacaggt
ttctaccccagtggagtcatggtgttctggcagaaagacggacacgatgagcatgaagat
gtggagcatgaagagactctccccaacgatgatggaacattccagaaaagcacccacctt
acagtgacgcctgaggagtggacgaagaacaagtatcagtgtgtggttcaagtcacgggt
atcatggaggacttcatcaaggttctgactgagcctgagatcaagaccaactggggaaag
accaacatcacttctgatgttggttccaactcctccacaactctgctccaaaggaatgag
ctttctctctcactaatcaaacaggagagaagcacagaaaagagaagaaagacagtgaac
tcttctattttgagtcaaagtaatgtgcacccagccacagacacctttctctaa
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