Capnocytophaga canimorsus: Ccan_09340
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Entry
Ccan_09340 CDS
T01582
Name
(GenBank) Efflux pump periplasmic linker bepF
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ccm
Capnocytophaga canimorsus
Pathway
ccm01501
beta-Lactam resistance
ccm01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ccm00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Ccan_09340
01503 Cationic antimicrobial peptide (CAMP) resistance
Ccan_09340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccm03036
]
Ccan_09340
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccm02000
]
Ccan_09340
01504 Antimicrobial resistance genes [BR:
ccm01504
]
Ccan_09340
Chromosome and associated proteins [BR:
ccm03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Ccan_09340
Transporters [BR:
ccm02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Ccan_09340
Antimicrobial resistance genes [BR:
ccm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Ccan_09340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_CusB
Beta-barrel_RND
YknX_C
BSH_CzcB
BSH_RND
Biotin_lipoyl
BSH_YknX
HH_MFP_RND
RND-MFP_C
BSH_YhbJ
HH_AprE
Beta-barrel_RND_2
BSH_ALG44
PS_Dcarbxylase
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
AEK23052
UniProt:
F9YUS7
LinkDB
All DBs
Position
complement(1000318..1001415)
Genome browser
AA seq
365 aa
AA seq
DB search
MRIFFILAGLSLMTACNNTPKQVQQGIKTLPVITVGEQSSTYHLSYPVNIEGKVNSPVQA
RISGYITQVLVDEGQQVTKGQPLFRLETQALNQSSQAAKSAVDAAQVEVNRLEPLVAKNI
ISSVQLETAKANLARIKASYAEVNANIDYAIVRAPVTGVVGSIPLREGALVSANNTVLTT
VSDVKEVYAYFSMNEKDYITFLEVAKGKSLNEKISNLPKITLVLANGERYPHQGTISTVT
GQVDKNTGSIRFRATFPNAEGLLTNGNSGTILIPEVHANSLVIPEVATFEQQGLVFAYKV
EQDTVKQVIITLKNRNNNLAVVSDGLQKGDILVVQGLNGIRTGMKIQTKPVSMDSLVQAI
KPAFR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgagaatattcttcattttggcaggtttgagcctaatgacagcctgtaacaacacccca
aaacaagttcaacaaggtataaaaacgcttccggtaatcacggtgggggaacaaagcagt
acgtatcacctttcttatccggtgaacattgaaggaaaagtgaatagccctgtacaagcg
cggatatcgggatatattacacaagtgttggttgatgaaggtcagcaagtaaccaaaggt
caacctctttttagattggaaactcaagcgcttaaccaaagctctcaagccgccaaatcg
gcagtagatgcagcgcaggtggaagtcaaccgccttgaacctcttgtcgccaaaaatatt
attagttccgtacagttagaaactgccaaagccaacttggctcggataaaggcaagttac
gccgaagtgaatgccaacatcgattatgccatagtcagagctcctgtaacgggtgtagtg
ggtagcattcccttacgtgaaggtgctttggttagtgccaataacacggttttgactact
gtttcagatgtgaaagaggtatatgcttacttttctatgaatgagaaagactatattacc
ttcttagaggttgccaaaggcaagtccttgaatgaaaaaatcagtaatttgcctaagatt
acattagttttagccaatggcgaacgctatccgcaccaaggaaccatcagtactgtaacg
ggtcaagttgataaaaacaccggaagcattcggtttcgagctacattccccaatgcggaa
ggactgcttactaatggtaacagcggtaccatacttattccggaggtacacgcaaatagt
ttagtaattccggaggtagccacctttgagcaacaaggcttggttttcgcctataaagta
gagcaagacactgtaaaacaagtcatcattacccttaaaaaccgaaataataacttagcc
gtagtatctgacggactgcaaaaaggcgatattttggtcgtgcaaggacttaatggtatc
cgaacaggtatgaaaatccaaacgaaacccgtttctatggatagtttagtacaagccatc
aaacctgctttcagataa
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