Corynebacterium callunae: H924_05755
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Entry
H924_05755 CDS
T02507
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
ccn
Corynebacterium callunae
Pathway
ccn03030
DNA replication
ccn03410
Base excision repair
ccn03420
Nucleotide excision repair
ccn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H924_05755 (ligA)
03410 Base excision repair
H924_05755 (ligA)
03420 Nucleotide excision repair
H924_05755 (ligA)
03430 Mismatch repair
H924_05755 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccn03032
]
H924_05755 (ligA)
03400 DNA repair and recombination proteins [BR:
ccn03400
]
H924_05755 (ligA)
Enzymes [BR:
ccn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
H924_05755 (ligA)
DNA replication proteins [BR:
ccn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
H924_05755 (ligA)
DNA repair and recombination proteins [BR:
ccn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
H924_05755 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H924_05755 (ligA)
MMR (mismatch excision repair)
DNA ligase
H924_05755 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
H924_05755 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
PTCB-BRCT
BRCT_2
Arc_PepC
Motif
Other DBs
NCBI-ProteinID:
AGG66595
UniProt:
M1UES1
LinkDB
All DBs
Position
1222099..1224144
Genome browser
AA seq
681 aa
AA seq
DB search
MTEDNAQLRRTWNDLAEKVRYHRDLYYNQQPEITDADFDVLFKQLQKLEEDYPELAVPDS
PTKEVGAPIAEQSSFDNVTHLERMLSLDNVFDEQELREWLARTPAKQYLTELKIDGLSID
LVYRNGVLERAATRGDGRIGEDITANARVIEDIPHELKATVDYPLPTVLEIRGEVFIPVE
DFSEVNAQRIAEGGKPFANPRNAAAGSLRQKNTEDVKKRRLRMISHGIGFTEGFSPSSQH
DAYLALSAWGLPTSPYTEAVTDPETVVEKVNYWADHRHAALHEMDGLVIKVDDIASQREL
GATSRAPRWAIAYKYPPEEVTTKLLDIQVGVGRTGRVTPFAVMEPVFVAGSTVSMATLHN
QSEVKRKGVLIGDTVVIRKAGEVIPEVLGPVVELRDGTEREFVFPSQCPECGTTLAPAKA
DDVDWRCPNSQSCPGQLSARLTYLAGRGAFDIEALGEKGAQDLIRSEILVDESGIFDLTE
EDLLKSQVYTTKAGKVNASGKKLLRNLQESKKTDLWRVLVSLSIRHVGPTAARALAGRYR
SLKALVDAPLEELAETEGVGSIIAQSFKEWFEVDWHRNIVETWAAAGVTMEEEITEQAEQ
TLAGLTIVVTGGLEGFTRDSVKEAIISRGGKAASSVSKKTDFVVVGENAGSKATKAEELG
LKILDEEGFVELLKKGAPELP
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
gtgactgaagataatgctcaactgcgcagaacctggaacgatcttgctgaaaaggtgcgc
taccaccgcgacctttattacaaccaacagcctgaaatcaccgacgcggacttcgatgtc
ctttttaagcaacttcaaaagttggaagaggattatccagaactcgcagttcccgatagc
cccaccaaagaggtgggagcgcccatcgcagagcaatccagttttgacaatgtcacccac
ctggaaagaatgctcagcctcgacaatgtctttgatgagcaagaacttcgggaatggttg
gccagaactcctgctaagcaatatctcactgaactaaaaattgatggtctctccatcgat
ctggtctaccgtaatggtgtgctggagcgtgctgccacccgcggtgatggccgcattggt
gaagacatcactgctaatgcccgggtaattgaggatattccgcatgagcttaaagcgact
gtagattatcctttacccactgtcctggagatccgtggcgaggttttcatcccggttgag
gatttctcagaggtaaatgctcagcgtatcgccgaaggtggcaaaccttttgctaatccg
cgtaacgctgctgcaggttccttgcgtcagaaaaataccgaggatgtcaaaaagcgccgt
ctgcggatgattagccacggcatcggttttactgagggctttagcccatcctctcaacat
gatgcctacctggcactttctgcctgggggctgcctacctcgccttataccgaggccgtc
accgatcctgaaactgtggtggaaaaggtgaactattgggctgatcatcgccatgctgcc
ttgcatgaaatggatggtttggtgattaaggtcgatgacattgcctcgcagcgtgagctg
ggtgctactagtcgcgccccacgctgggcaattgcctataaatatccgccagaggaagtc
accaccaagctgcttgatattcaagttggagtgggtcgcacggggcgcgtaaccccattt
gctgtgatggagccagtttttgtggccggctccacggtgtccatggcaaccttgcacaac
caaagcgaggtcaagcgcaagggcgtgctcattggcgatacggtggtgattcgcaaagct
ggtgaggttattccagaggttttgggtcccgttgtagagctacgagatggcacagaaagg
gagtttgtcttccccagccaatgtcccgaatgtggcacaacgttggcgcctgcaaaagcc
gatgatgtggattggcgatgccccaatagtcaaagctgccctggtcagctcagtgcgcgc
ctgacttacctggctggacgtggagcttttgatattgaagctttgggggagaagggtgca
caagaccttattcgcagtgaaatcttggtagatgaatccggcatttttgatctcaccgaa
gaagatcttctaaagtcacaggtttacaccactaaagccggcaaggttaatgcctcgggc
aagaaactgctgcgcaacctgcaggaaagtaaaaaaactgatttgtggcgcgtgctggta
tcgctttcaattaggcatgtgggccccaccgccgcgcgcgcccttgcaggccgctaccgc
tcattaaaggcgcttgtcgatgcacccttggaggagttggcagaaaccgagggggtgggc
agtatcatcgcacagtctttcaaagagtggttcgaggttgattggcatcgcaatattgtt
gagacctgggctgccgcgggagtgaccatggaagaggagattactgaacaagcagagcag
accttggctggacttaccatcgtggtcactggaggtttggaaggctttacccgcgattct
gtcaaagaagccattatttcccgcggtggtaaggcagctagctcagtgtccaaaaagact
gactttgtcgtggttggtgaaaatgccggatccaaggcaactaaagctgaggaactgggc
ttgaagatcttggatgaggaaggtttcgtggaacttttgaaaaagggagctccggaatta
ccctga
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