Cyphomyrmex costatus: 108776255
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Entry
108776255 CDS
T11118
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
ccoa Cyphomyrmex costatus
Pathway
ccoa00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108776255
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccoa01007
]
108776255
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccoa03016
]
108776255
Enzymes [BR:
ccoa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
108776255
Amino acid related enzymes [BR:
ccoa01007
]
Aminoacyl-tRNA synthetase
Class I (U)
108776255
Transfer RNA biogenesis [BR:
ccoa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108776255
Prokaryotic type
Other AARSs
108776255
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
DUF5915
Anticodon_1
tRNA-synt_1g
Ubiquitin_IARS1
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
108776255
NCBI-ProteinID:
XP_018398312
UniProt:
A0A151IFS6
LinkDB
All DBs
Position
Unknown
AA seq
1255 aa
AA seq
DB search
MIVKRYAFDGTLRSQKLNIPETINFAEEEEKTLKLWESVDVFRTCMHMSAICNRPKYSFY
DGPPFATGLPHYGHILAGTIKDIVTRYAYQSGYHVERRFGWDCHGLPVENEIDKKLGIKG
PDDVAKMGIKAYNQECRKIVMKYSTEWQQIVGRMGRWIDFKNDYKTMYPWYMESIWWVFK
QLYLKGLIYEGIKVMPYSTACNTPLSNFEAGQNYKDVVDPSIVVAFSLLDEPGVSLLAWT
TTPWTLPSNLALCVNPTFEYVKVKNERTGDIYIILEAQLQILKGPYTIIDRMKGTDLKGK
AYEPLFPYFLHYKEKGAFRVLNDAYVTAETGTGIVHQAPYFGEDDFRCCMEAGIIRKDQE
IVCPVDSCGCFTEPVHDFLGKYVKLADKDIIKYLQLKKRLIINSTMKHSYPFCWRTDTPL
IYKAVPSWFLKVEEIKDKLLVTNSETYWVPDFVKEKRFGNWLRDARDWAISRNRYWGNPI
PLWISEDREEIVCVGSMEELERLTGAKVKDIHRENIDHLTIPSKRAGQPPLRRVPEVFDC
WFESGSMPYAQVHFPFNQDPKKFDEIFPADFVAEGIDQTRGWFYTLLVISTALFGKAPYK
NLVANGLVLASDGQKMSKRKKNYPDPMEVVNKYGADALRLYLINSPVVRAENLKFKEEGV
RDIIKDIFLPWYNAFRFLMQNIDQYQDLGIRFVIAESQESCSNNIMDKWIMSITQSLLIF
VKKEMEEYRLYTVVPYLIKYIDNLTNWYVRMNRKRIKGEDGMEDCDNALTTLFLAIYTMV
QTYAPFTPFLTEFMFQRLYQWVVISSNDESKNLGYHNTDYHYIKKNHPAEEFKYQPSNWS
EPIDETEDMKQVPNANISDEYSKDYSVFDGSVHYKLISHPRHHLINKDIEKAVSHMQSVI
QLGRIVRDRKIIPTKYPLPEIVVIHRDDKVLRDIVSLKSYILEELNIKKLTVTTDKEKYG
VTLRAEPDHKTLGARLKGEFKQIIQAIKELSDEQLQKFVSTKEIVVQGHKLEEQDLRLMF
SFTGPAAEQLSKQYEAHSEGSILILLDITADEAMHNEGIAREVINRVQKLRKKARLVPSD
EAVAYYEIKDMNGNLAKVIVSHKDFIENVTKTPLKDMTELPRNIDVIIEEMQKIKDIDMR
LMLVRTSTSLTSTQEDSTMSLESQSSVSYVNVKLLNLQPRYGASSKNKIYLYNSQHGPLT
YKRLKQEIDLVFGMYGCTYDIYLNAKKITKTDDTPVEEDMFNKQLLEVMRPKKYI
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgattgtcaaacgttatgctttcgacgggacgttacgttctcaaaagttgaatattccg
gagactatcaacttcgcggaggaggaggagaagacgttgaaattatgggagtcggttgat
gtatttcgtacatgcatgcatatgtctgctatatgtaaccggccaaagtattcattttac
gacggaccaccttttgccaccggcctcccgcattatggccacatccttgccggcaccata
aaggacatcgtgacgaggtacgcatatcaaagcggctatcatgtagagcgtcgatttgga
tgggactgccatggtcttcctgtggagaatgagattgacaagaagctgggtatcaagggg
cctgatgatgtcgccaagatgggcatcaaggcttacaaccaggagtgccgtaaaatcgta
atgaaatattccacggaatggcagcaaattgtcggccggatgggacggtggatcgacttc
aagaatgactacaagaccatgtatccatggtatatggagtccatctggtgggtgttcaag
cagctataccttaagggtctcatctacgaaggtatcaaggtaatgccttattctactgcc
tgtaacacgccattgtccaactttgaggcaggtcagaattacaaggatgtagtagatcca
tcgatcgttgtagcgttttccctgctggatgagccaggagtgtctctactggcctggacc
accactccttggacgttacctagtaatttagcactatgcgtcaatcctacttttgaatat
gtaaaggtaaaaaatgagagaactggtgacatttatatcatattggaagctcaattgcaa
atccttaagggtccttataccataatagaccggatgaagggcacagacctgaaaggaaag
gcatatgaaccactgttcccatattttttgcattataaagagaaaggtgctttcagagtc
ctgaatgacgcttacgtcacagcggaaaccggaaccggcatcgtccatcaagccccgtac
ttcggagaggatgattttcgatgttgcatggaagccggcatcatacgtaaggaccaagag
attgtatgtcccgtggatagttgcggctgcttcacagagccggttcatgatttcctcggc
aagtacgtcaagctcgcagacaaagatataataaagtatttgcaacttaagaagaggctg
attatcaacagtacaatgaaacacagctatccgttctgctggagaacggacacgccgctt
atttacaaagctgtgccctcttggttcctcaaggtggaggaaatcaaggataagttacta
gtgacaaatagcgagacttactgggtgccggatttcgtgaaggagaaacgattcggcaat
tggctgcgtgatgcgcgcgactgggccatcagcaggaatcgttactggggtaatcctata
ccgctttggatctccgaggacagggaagagatcgtgtgcgtgggcagcatggaggagctg
gagagattgacgggcgcaaaagtcaaggacatccatcgcgagaacattgatcatctgaca
ataccgtcgaaacgcgcgggacagccgccgttgcgtcgtgtacctgaggttttcgactgc
tggttcgaatccggttctatgccgtacgcgcaggttcactttccattcaatcaagatccc
aagaaatttgacgagatctttccggcagacttcgtcgccgaaggtatcgatcagacgcgt
ggctggttctacacacttttagtgatatccaccgcactgtttggcaaggcgccgtataag
aacctcgtggccaatggtctagtactcgcatccgacggccaaaagatgtcaaaacgtaag
aaaaattatcccgaccccatggaagtggtcaacaaatacggagcagacgctctgcgtctt
tatctgatcaattcgccagtcgtgagagccgagaatcttaagttcaaggaggagggtgtc
cgagacatcatcaaggacatcttcttgccgtggtacaacgcgttccgttttctaatgcag
aacatcgaccagtatcaagatttggggatcaggtttgtaatcgccgaaagtcaagaatcc
tgttccaacaatataatggataaatggattatgtccatcacgcaatcgttgttgatcttc
gtgaagaaagagatggaggagtatagactgtatacagtggtgccctatctaataaagtac
atagacaatctcacaaattggtacgtaagaatgaataggaaacgcatcaaaggtgaagac
ggtatggaagattgtgataatgcattaacgactctatttctagcaatttatacgatggtg
caaacctatgcaccattcacaccattcttgacggaattcatgtttcagcgattataccaa
tgggttgtcatctcgtcgaatgatgagtctaagaatctcggttatcacaatacggattat
cactatattaagaaaaaccatcctgctgaggaattcaagtatcagccgagtaattggtct
gagcctattgatgaaacagaggacatgaagcaagttcctaacgcgaacatttcagatgaa
tatagcaaggattatagtgtttttgatggcagtgtacattacaaactgatatcacatccg
cgacatcatctgattaacaaagacatagagaaggctgtgtcgcacatgcagtcagtcatt
caattgggtcgcattgtacgcgacaggaagatcattcccacgaaatatcctttgccggaa
atcgtggtaatccatcgagatgacaaagtattaagggacattgtttcgttaaagtcatat
atactcgaagagctcaacatcaagaagttaactgttactactgacaaggagaagtatggc
gtgaccttgagagcagaaccagatcataagacactcggtgctcgtttgaaaggcgaattc
aaacagataattcaagccattaaagagttatccgacgaacagctgcagaagtttgtctcc
acgaaggaaattgttgtgcagggtcacaagctcgaggaacaggacctacgcctgatgttc
agcttcaccggtccggccgccgagcaactgtcgaagcagtacgaggctcacagtgaagga
agcatactgatccttctggacattactgccgacgaggcgatgcacaacgagggaatagca
cgtgaagtgatcaatcgagtgcagaagctgcggaagaaagcacggcttgtgccctccgat
gaagccgtcgcgtattacgagatcaaagacatgaacggtaacttggcgaaggtcatcgtc
agtcacaaggatttcatcgagaacgtgaccaagacaccactgaaagatatgacagagtta
cctcgcaatattgatgtcattattgaagagatgcagaaaatcaaggacattgatatgagg
ctcatgttggtcagaacatcgaccagtctaacgtcaacacaggaagacagtacaatgtca
ttggaatcgcaatcctctgtgagctacgttaacgtaaaacttttaaacttgcaaccacga
tacggcgcgtcttcgaagaataagatttacttatataattcacaacatggtcctctcaca
tacaaacgtttgaaacaggaaatcgatttggtatttggtatgtatggttgtacatatgat
atttatctcaatgctaagaaaattaccaaaacggatgatacgccagtggaggaagacatg
ttcaataaacaattgttagaagtaatgagaccaaaaaaatatatataa
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integrated database retrieval system
