KEGG   Cyphomyrmex costatus: 108776743
Entry
108776743         CDS       T11118                                 
Name
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
ccoa  Cyphomyrmex costatus
Pathway
ccoa03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    108776743
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccoa03400]
    108776743
Enzymes [BR:ccoa01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     108776743
DNA repair and recombination proteins [BR:ccoa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     108776743
SSDB
Other DBs
NCBI-GeneID: 108776743
NCBI-ProteinID: XP_018398947
LinkDB
Position
Unknown
AA seq 894 aa
MVPNINDSRPSCAVFVLYMKMYWFRKGQQKLKGRESLTLGVLPNRGAGQLVKDVSFYPIL
RLLVPHLERQRGPHNLKQVSLANLYAHIYGFAKNSDSYKKLTNYREFSSDKFIGNDFADR
AYYVLNKKLPRIDTGLTIAQINEFLDSISERKMNVTKQQKVETFRVLFRQITGFEMKWMT
RIILKDLRLGIGPQKILHIYHPDANDKSLVTNDLREICNQLHNPKIKLKCSIQIFSYFKP
MLLERCNIENIGKLFRDNDLYYVQTKYDGERSQLHMKNGKFKYFTRRGYDITNKPGYGET
GSSGLLTAVFTRCLNSNCHSFILDGELMAWHKEKQIFSTKGMNVDVKHLLASSHHQPCFV
AFDVILHNDILLIDTPYEDRLKLLNDIFTEEEGSLTICRSTLISNREELIQEFNIRLRYN
EEGLVIKRYNMKYKPNIRDGNGCYKIKAEYTDNLIQDIDLIILGGYYGNGRYIGKIKSFM
MGVAAPTNKEGENPSQFFSVVSVSTGIGDEMLRHLQTKLAPYWIKDHPKNIISPKGNQPD
MWIHPEHSIILTIRASEMIRSNEYPIGYSLRFPRVMNVRMDKPWYNSCTTLELLSLAKNG
GMIQKLTKREATLHDCDQVSVSKLQKTMNRSKSIEYNTCNKRVVPLTRLLDGREICVING
DDELSKEEIEEILQQHSAKVVQNPVNTIFCVIVGNNKTIRGKEVINSGKYDVVTLDWVKR
VFNRSEWILSIDFLPWELLRSRNITRNQVTENYDGYYDSFVVDANEESLKRSFNKIEKSI
EFTESKLIIEQEKEMDKNLFGGTSPYSLFRDTVGFFENESCSAKFKFRFMSGKIENNINN
SVTHVFVEDNATSSIVKNMKACEQTSIKIVKCKWIEECFQNDRIYDITDYLINY
NT seq 2685 nt   +upstreamnt  +downstreamnt
atggtacccaacatcaacgattctcggccttcctgtgctgtctttgttctttacatgaaa
atgtattggttcagaaaaggacaacagaagttgaaaggccgagaatcgttgacgttgggt
gtacttcctaataggggggccgggcagctggtgaaagatgtatcattttatcctatctta
agattgctagtacctcaccttgaacgacagcgtggaccgcataatttgaagcaagtttcg
ttggcaaatctttacgctcacatatatggtttcgcaaaaaatagcgacagttataaaaaa
ttgacaaattatcgagaattctcgtcggacaaatttataggaaatgatttcgctgatcga
gcttattacgtattgaataaaaagttacctcgaatcgatactggactcacgatcgcgcag
atcaacgaattccttgatagtatctccgaaagaaagatgaatgtaacgaagcagcaaaaa
gttgaaacgtttcgagtactttttcgacaaattacaggatttgagatgaagtggatgaca
cgtatcattcttaaagatttacgacttggtataggaccacaaaaaatactgcacatatat
catcccgacgcgaatgataaatctcttgtgacgaatgatctgcgcgagatttgtaaccag
ttacataatcctaagattaaattaaaatgtagtatacagatattttcatattttaaacca
atgctcttagagagatgcaatatcgaaaatatcggtaagttatttcgggacaatgactta
tattatgttcaaactaaatacgacggcgaaaggtcgcaactccatatgaagaatggaaaa
tttaaatacttcacacgtagaggatacgacattacaaacaaacctggatatggagaaact
ggatcttcgggtcttttaaccgcggtatttacgcggtgtttaaattcgaattgtcattct
tttatattggatggagaattaatggcttggcataaagagaaacaaatctttagtacaaaa
ggtatgaatgtcgacgtcaaacatttattggcgagcagtcatcatcaaccgtgtttcgtt
gcgttcgatgtgattctgcataatgacatcttgctcattgatacaccttatgaagacaga
ttaaaacttctcaacgatatattcaccgaagaggaaggttctctaactatatgtcgatct
actttaatttcaaatagggaagaattgatacaggaattcaatattcgcctccgttataac
gaggaaggacttgttataaagagatataatatgaaatataaaccaaatattcgagatggc
aatggttgttataaaattaaagcagagtatactgacaatttaatacaagatatagatctt
atcatacttggcggttattacggaaatggcaggtatataggaaaaattaaaagctttatg
atgggtgttgctgcaccaacgaacaaagaaggagaaaatccatcccaatttttctccgtc
gtatctgtaagcactggaataggagatgaaatgttacgtcatcttcaaacaaaacttgcg
ccatattggatcaaggatcatcctaaaaatattataagtcccaagggaaatcaaccagat
atgtggattcatccagaacattctataattttaacgatacgggcgtctgagatgatacgt
agtaatgaatatccaattggatacagtttacgatttcctagagttatgaatgtaaggatg
gataagccctggtacaattcatgtactactctcgaattactatcgttggccaaaaatgga
ggaatgattcaaaaattaaccaagcgggaagctactctacatgattgcgaccaagtatca
gtctctaaattacaaaagacaatgaatcgaagtaaatcgattgaatataacacgtgtaat
aagcgcgtagtaccacttacgcgactattagatggaagagaaatttgtgtgatcaatggt
gacgatgaattatcgaaagaggaaattgaagaaatattgcagcaacacagtgcaaaagtt
gttcaaaatccagttaatacgattttctgtgtgatagtaggcaataataaaacgatacga
gggaaagaagtaataaacagtggaaaatatgatgttgtaactctcgattgggtcaaacgt
gttttcaatcgatccgagtggatcttatcgattgattttttaccatgggaattattacgc
agtcgaaacattactagaaaccaagttacagaaaactatgatggatattatgatagtttt
gtcgttgatgcaaatgaggaaagtttgaagcgttcattcaacaagattgagaaatcgatt
gagtttacagagagtaagttgattattgagcaagaaaaagaaatggacaagaatttgttc
gggggcacatcgccttattcattgtttagagatacagttggattttttgagaatgaatcg
tgtagcgctaaatttaaattccgttttatgtcaggtaaaattgaaaacaacattaataat
tctgttacgcatgtttttgtagaagataacgctacgagttctattgtgaaaaatatgaaa
gcatgtgagcaaacatctataaagattgttaaatgcaaatggattgaggaatgtttccaa
aatgaccgaatatatgatataacagattacctaatcaactattga

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