KEGG   Cyphomyrmex costatus: 108779610
Entry
108779610         CDS       T11118                                 
Name
(RefSeq) sm-like protein LSM3A
  KO
K12622  U6 snRNA-associated Sm-like protein LSm3
Organism
ccoa  Cyphomyrmex costatus
Pathway
ccoa03018  RNA degradation
ccoa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108779610
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108779610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccoa03019]
    108779610
   03041 Spliceosome [BR:ccoa03041]
    108779610
Messenger RNA biogenesis [BR:ccoa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108779610
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     108779610
Spliceosome [BR:ccoa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    108779610
 Complex C
  U2 snRNP components
    108779610
SSDB
Motif
Pfam: LSM TIG_SUH CwfJ_C_1
Other DBs
NCBI-GeneID: 108779610
NCBI-ProteinID: XP_018402559
LinkDB
Position
Unknown
AA seq 98 aa
MVEESEQLPPIDVKEPLDLIKLSLEERIYVKMRNERELRGKLHAFDQHLNMVLGDVEEII
NIVEIDEETYEEIYRQKKRTIQMLFVRGDGVILVSPPT
NT seq 297 nt   +upstreamnt  +downstreamnt
atggttgaagaatcagagcagttgccgccaatagatgtgaaggagccgctggaccttata
aagctaagcctggaggagcggatttatgtaaagatgagaaacgagagagaactcagagga
aaactacatgcctttgatcaacacctgaatatggtgttgggcgatgtggaagagattata
aacatagtggaaatcgatgaggaaacgtatgaggaaatctaccgccagaaaaagagaacc
atccagatgctatttgtgcgcggtgacggtgtcatcctggtatctccacccacgtaa

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