Cyphomyrmex costatus: 108779738 Help Entry 108779738         CDS       T11118                                  Name (RefSeq) protocadherin-15   KO K16500   protocadherin-15 Organism ccoa  Cyphomyrmex costatus Pathway ccoa04519   Cadherin signaling Brite KEGG Orthology (KO) [BR:ccoa00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04519 Cadherin signaling     108779738  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:ccoa03037]     108779738    04515 Cell adhesion molecules [BR:ccoa04515]     108779738 Cilium and associated proteins [BR:ccoa03037]  Primary cilia and associated proteins   USH complex and associated proteins    108779738 Cell adhesion molecules [BR:ccoa04515]  Cadherins   Protocadherins    108779738 SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Ig_CLSTN Cadherin_FAT4_N Ig_Cad99C_N Fibulin_C Ig_BT4661_3rd CDH23_a-b PCDH15_12th RibLong P22_gp7 DUF3671 He_PIG Motif Other DBs NCBI-GeneID:  108779738 NCBI-ProteinID:  XP_018402714 LinkDB All DBs Position Unknown AA seq 1583 aa AA seqDB search MARTMTRWFWCVMCVILHLRNVHSKVGLCEVEGGQSNIILDIEESRGNAIDQKTVPEELP VSGDPYNETMLELIFPGRTIPLFKLNGKNLQLLEPLDRDDENLSHVVFQLSCTVKLTNKK RMIPVIVRVSDINDNAPKFINTPYETTVPELTPVGSTIFKNVDAIDADAGVNGIVEYSIA PGDGSRIGSNEGVGRNRITTVDGYGYFSINLPHQGQVTVNRTLDYERTQRYLVTILASDR ARNVSERFTSTTTLTVNIRDDDDQDPSFIYQGCMLLDGACINPEYSASVSSGVLSGILNI SPEKIQAVDMDSINAPIHYSFLSGNPPNYRDFFEINPNTGAVKQIKAVDTTVTKKFDIII KAVEVSETKRSATAKLAITVKPVDSNPPVITASNIEGFVDENAPIGTKVIDESGNPIVLT VSDADLGPDDPKPAYTFELTTNFFAIDPSGILVVNEENLDRDPPSPGRFRFQVVAREKTG VAASSPLSFVVTLNDVNDNAPLLPMMAPITVQAGETKRQIAKVEATDNDEGENAEITYSI YHVSNNGLHKFKIDPKTGVIESVRKLNAGEQYSITVQATDKGGKYSQTIVEVNVIPGPNT RSPVFQQPVYEVQVSEGASINSTVATITATDPENDPVSYSIVSGNDLRQFAIGDKSGVIT VIRKLDREDLTRYQLLIKAEDTGGLYSTATVNIMVTDINDKNPEFVGLPYEFTVKENEAR KLIGRVHAEDADEGINAEITYFVPDDIPFTVDPETGDVLTKIVLDYEQNNEYKFVVTARD GAPDYRLATATVTVKVVDVEDEVPVFHQSSYEARVKENVPDHNVIQVTADDPDTKKQITY MIKQGDTELFNIDPKTGVIKTIRGLDYESQSQHVLIIGTEENTSNLPGSTTRVVINVQDV NDIPPVFTSVPRPITLDDDVPIGTTVIDLVAADSDGTAPGNQVRYDIIGRGIASKYFVID PDTGILRVRDDLRKETDSEYQIDVLAYDMGDPPLSSETTVTVYVRHVATVPPEIGLGFAE NSYNVEVPEDAGDNTLIKIITIINSHAYNTTPLRCEIYSGNEEGLFEANVTKERNCALRL KKGALDYETTESYQIKIKLESLSGLLNSGRNTTMVKIQVLDVNDNKPEFIFPEASQTLTR ERYFAAIPRTAQFASTVVQVKAHDKDNGKYGKLEYKILEGRGSGYFVIDGSTGIIRTTAT FDHVDASELPFKFDVRVRDNPNSNDNYNSIFAPVIVNLIGEENLMILVVQNAAPDVLQKE TDKIANVIEQKSGLLIGIDRVAMRKNLTKNGTIETFPQDSDVWFYAVDPDTEAILSRNST KVQRSILDKSAMSNIIFDVSTVVWANAIDIHAPVMPPEPVRTQTAVAFSGEVFPYALIII ACVILILGIAGIIYICVSWSKYKAYKERMQRMYVVPRYDPVYVEPNLKEYETQVLQMSVP VDDNDSCNDLQLDFSNKNHAFSLDNVSYITKDHGDSTGQQSPVSSEAATTARASSIVGNH GDTNIHSLRRSTLGRKNHSASNTNTLNNRDATPVLNPLYNHGGDLLSPSPSNDNVTFRER KDYSHLGFTYLGEQSPVETTTEL NT seq 4752 nt NT seq  +upstreamnt  +downstreamnt atggcaagaacaatgacccgctggttttggtgtgtgatgtgcgtgattttacatctcagg aacgttcattctaaagtcggtttgtgcgaagtggaaggaggacaatcgaatatcattctt gatattgaagaaagtagaggaaatgcaatcgatcagaagaccgtgccggaagaacttccg gtgtccggcgatccttataacgagactatgctggagctcatctttcctggaagaacgatc cctctttttaaattgaacggcaaaaaccttcagcttctcgagccattggacagagacgac gaaaatctctcacatgttgtttttcagttgagctgcacagtgaagttgaccaataaaaag cggatgatcccggtgatagtgagagtgtccgacatcaatgataatgcgccaaaattcatt aacacgccgtatgagaccactgtaccggagctcactccggtcggttcgacgatcttcaag aacgtcgacgcgatcgacgccgacgccggtgtcaatggtatcgtcgagtactcgattgcg cctggcgatggcagcaggattggtagcaacgagggtgtcggacgcaacaggatcaccact gtcgacggatacggctatttcagcatcaatctgccgcaccagggacaggtcacggtcaat cgaacgctcgactacgaaaggactcagcgttatctcgtcaccatcttggcatcggatcgg gcgagaaacgtttccgagagattcacatccacgaccacattgacggtgaacatacgggac gatgatgatcaagatccatcctttatttatcaaggctgtatgcttttggatggcgcctgc atcaatccggaatactccgcgtcggtatcgagcggagtactatccggcatactcaatatc tcgcctgagaaaatacaagcggtcgacatggacagtataaacgcgccgattcactattct ttccttagtggaaatccaccgaattatcgagatttctttgaaatcaatcctaataccgga gcagtgaagcaaattaaagctgtcgacacgacagtaacgaagaagtttgatattattatt aaggcggttgaagtatcggaaacgaagcgatctgcaaccgctaaattagcaatcactgtc aagccggtcgatagcaatccacccgttataacagcgtcaaacatcgaaggtttcgtcgac gagaatgctccgattggcacaaaggtcatcgatgaaagcgggaatcctattgttctcacc gtgtcggacgccgatttgggaccagacgatccaaaaccggcatatactttcgaactgacc acaaatttctttgcgatcgatccttccggcatccttgtcgtaaatgaggagaatttggat cgagatcctccgagtcccggccgctttcgtttccaggttgtcgcccgggagaaaacgggt gtggctgcgtcatcacctctatcgttcgtcgtgacgttgaacgacgttaacgacaatgcg cctctgcttccaatgatggcacccatcactgttcaagcgggagagacgaagagacaaata gcaaaggtggaagccacggacaacgacgagggtgaaaacgcggagataacgtatagtatt tatcatgtgtcaaacaacggcttgcataagttcaagatagatccgaagaccggagttatc gagtccgtgaggaaacttaacgctggtgaacagtacagtattacagtgcaggccaccgac aaaggtggcaagtactcgcagacaatcgtcgaggtgaacgtcattcccgggcccaacacc agaagccctgtgttccagcaaccggtgtacgaggtgcaagtcagcgagggagcctccatc aattccacagtcgcgactatcactgccactgacccagaaaacgatccggtgtcgtactcg atagtatcgggaaatgatttgcgccagtttgcgatcggcgacaaatcaggcgttattacc gttataaggaagttggatagggaggacctgacccggtatcagttgttaataaaggctgag gataccggtggtctctacagcaccgcgacggtcaacattatggttacggatatcaacgac aagaatcccgaattcgtgggtctcccttatgaatttacggtcaaggagaacgaagcgcgt aaattaattggccgcgtgcatgccgaagacgccgacgaaggtataaacgctgaaattact tatttcgtacccgacgatattccttttactgtggatcccgagactggcgatgtcctgacg aagatagtgctggattacgagcagaataacgaatacaaattcgtagtgactgcgagggat ggagcccccgactatcgtttagcaactgcgactgtcacggtgaaagtcgtagatgtcgag gacgaggttccggtctttcaccaaagcagttacgaggcacgtgtcaaggaaaacgtgcct gaccataatgtaattcaagtcacggccgatgatccggacacaaagaagcaaattacgtac atgatcaagcaaggggataccgaactcttcaacatagacccgaagactggagtaataaaa actattcgcggtctcgattacgaaagccagagccagcacgtacttatcataggcactgag gagaacaccagcaatttacctggctctaccacccgcgttgttattaatgttcaggatgtg aacgacattccaccggtatttacatcggtaccacgtccgattacgctggacgacgatgta cctataggaacgaccgtaattgatcttgttgctgcagattccgatggaaccgctccggga aatcaggttcgatatgatatcatcggtcgcggcatcgccagcaagtacttcgtaatcgat cccgacaccggcatactccgagtacgagatgacttgcgcaaggagactgactccgagtat cagattgatgtactagcatacgatatgggagacccaccattgtcgtccgaaacgactgta acagtttacgtacgtcacgtggcgacggttccgccggagatcggtttgggttttgcggag aattcgtataacgtcgaagtacccgaagacgcgggcgacaacacgctaataaagataatc actatcattaacagtcacgcatacaacactacgccactcaggtgcgagatttatagcggc aatgaagaaggcctgttcgaagcgaacgtcacgaaggagcgaaattgcgcgctgagactg aagaaaggagcgctggattatgagacgacggaatcttaccagattaagatcaaactggaa tcgctctcaggccttttaaactcaggcagaaatacgacgatggtgaagatccaagtgctg gatgtaaatgataacaagcccgagtttattttcccggaggcgagtcagacgcttacgagg gaacgttactttgcagcgattccacgcaccgcgcaattcgcgtccactgtcgtacaagta aaggctcatgataaagataatggcaaatacggcaaactagaatacaaaatcctggaaggg cgaggttctggttatttcgtcatcgacggctccaccggcataattaggacgacggctaca ttcgaccatgtggatgcatccgagcttccattcaaatttgacgttcgcgtgcgcgacaat cctaattcgaatgacaattacaattcgatcttcgcgcctgtgatcgtcaatcttatcggg gaagaaaacctgatgattctcgtggtacaaaacgcagcgccggatgtactgcaaaaagaa accgataaaatagcaaacgtaattgaacaaaagagcggtctgctgattggtattgacaga gtcgcgatgagaaagaacctcacaaagaacggcactatcgagacgttcccgcaggactct gatgtatggttctacgcggtagacccagacaccgaagctatattaagtagaaacagtacc aaagtacagagatctattctggataaatctgccatgtcaaatatcatctttgacgtgtct acggtagtgtgggcaaatgccatcgacattcatgcacccgtgatgccacccgagccagtt cgaacacaaacggcggttgcatttagcggcgaggtattcccgtacgcgctgatcatcatc gcgtgcgtgattttgatcctcggcattgccggtatcatatacatatgcgtctcctggtcc aagtataaagcgtacaaggaacgtatgcagcgcatgtatgtggtaccacgatacgatccc gtttatgtagaacccaatttgaaggaatacgagacgcaagtgcttcagatgagcgtgccg gttgacgacaacgacagctgcaacgatttacaattggattttagcaacaagaatcacgca tttagtctggataatgtcagctacatcaccaaagatcacggagacagtaccggccaacaa agccccgttagctccgaagcggcgaccacggcacgagcatctagtattgtcggtaatcat ggcgataccaatattcattctctgcgacggtccacactgggccgaaaaaatcacagcgcg agcaacacgaataccctcaacaatcgcgacgcgacaccggtacttaatcccttgtacaat cacggcggtgatctgctgagccctagtccgtccaacgacaacgtcaccttcagggagagg aaggattactcgcatctcgggtttacgtacctgggcgagcaaagtcctgtggagaccaca acagaattgtaa

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