Cyphomyrmex costatus: 108781033
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Entry
108781033 CDS
T11118
Name
(RefSeq) dosage compensation regulator isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
ccoa Cyphomyrmex costatus
Brite
KEGG Orthology (KO) [BR:
ccoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccoa03041
]
108781033
03012 Translation factors [BR:
ccoa03012
]
108781033
Enzymes [BR:
ccoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
108781033
5.6.2.6 RNA 3'-5' helicase
108781033
Spliceosome [BR:
ccoa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108781033
Translation factors [BR:
ccoa03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
108781033
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
Dicer_dimer
HA2_N
nSTAND3
AAA_19
AAA_14
ATPase
HA2_C
NACHT
Motif
Other DBs
NCBI-GeneID:
108781033
NCBI-ProteinID:
XP_018404401
UniProt:
A0A195D312
LinkDB
All DBs
Position
Unknown
AA seq
1246 aa
AA seq
DB search
MGDIKSFFHQWCAKNGKEPQFDVRPTGPKHRQRFLCELRVPGFDYVGAGNSTNKKDAQGN
AARDYVNYLVRTNCVNLNDVPKDPAMPATMLADTMKNEVLTPVKSVFQGGMGPNDIGQAY
RPYNERGQSNYTYIDRLADQKKVEDAEDVDVNSGIHGNWTIENAKSKLHQFMQTNKINAD
YKYTPVGPDHTRSFMAEMSLYIKQLARSITGRETGSNKQTASKSCALSIVRQLYHLGVIE
AFSGTLKKNKDTEQMKAYPVKISPEIENQIHDVLTSLDIKPIDIKQPLIAKEANTTPKDE
NDTATAGVSLLTNQVLDDFISSVPQPAGVVSWSPPQPNWNPWTGCNIDEGPLATISLDKL
SEDLLNEQRDKLQQDVNIQTSIKERSNLPVFNKKNEIMNVVNENPIVIIRGNTGCGKTTQ
VCQFILDDYIASGQGAYCSIVVTQPRRISAVSVADRVAVERCESLGQSVGYSVRFESYLP
RPYASIMFCTVGVLLRKLEGGLRGVSHVIVDEIHERDVNSDFIMVVLRDMIHLYPDLRII
LMSATIDTTLFSEYFNKCPVVEIPGRSYPVQQYFLEDCIELTKFYPPTGSGKRKSKESDD
LPIPDAEPEENLNKVISTGYSNETKNAMGQLTEKEISFELIEALLTYIKVQDISGAVLIF
LPGWNLIFALMKHLQQHTLFGGSSYLIIPLHSQLPREDQRKVFDPVPSFVTKIILSTNIA
ETSITINDIVYVIDSCKAKMKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHL
CSKARFDKMDEHMTPEMFRTPLHELALSIKLLRLGNIGQFLSKAIEPPPIDAVIEAEVVL
REMKCLDKNDELTPLGKILARLPIEPRLGKMMILGCMFRVGDALSTMAANSTTFPEVYNM
GPDMKRLTAQQKWFAGARFSDHVAMFHAFQAWEEARTGGEWAEQTFCDSKSLSLPTLRIT
WEAKNQLQALLQSSGFPEETLCPMPLNYQASADPRLDTITALLCMGLYPNVCYHKEKRKV
LTTESKAALIHKTSVNCSNFEQNFPFPFFVFGEKIRTRAVSCKQMTMVSPIHLLLFGSRK
VEYIDGVIRLDNWINLDMNPQHAAAIVALRPALESLVVRASKDPETILELSPTEEKVLSV
IKALCNMNACRHELEPITSSSLQSSRPPRGHVTGFRANYNTPPKLMRGNGGFRGPVSNNE
SYGGHSGGFNDNRSGGYRGGFNNRGYAMGGLRGRGGNWNSGNRGRY
NT seq
3741 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatataaaatccttcttccatcaatggtgtgcgaaaaatggcaaagaaccgcaa
tttgatgttagaccaacaggacccaagcataggcaacgtttcctctgcgagttacgagta
cctggcttcgattatgtcggtgcaggaaattcgactaacaagaaggacgcgcaaggaaat
gctgcgagagattatgtcaattatttagtacgcacaaattgcgtgaatttaaatgatgta
ccgaaagatcctgcgatgccggcgacaatgttagcagatactatgaaaaatgaagtttta
acgccagtaaaatcggtgtttcaaggaggcatgggaccgaatgacattggtcaagcatac
aggccgtacaatgaacgtggccagagtaattatacatacatagatagactggctgatcaa
aagaaagtggaagatgcagaagacgttgatgtaaattctgggatacatggaaattggacg
atagaaaatgccaagtccaagcttcatcagtttatgcaaactaacaaaattaatgcagat
tacaaatatactccggttggtccggatcatacgaggagttttatggcagaaatgtcactt
tatattaagcaacttgcacgaagtataaccggccgtgaaactggatcaaataaacaaact
gcttcaaaaagttgtgctttgtctattgttcgccaattgtatcatctaggagtaattgaa
gcatttagtggtacattaaaaaaaaataaggatacggaacagatgaaagcttatcctgta
aaaatttcaccagaaattgagaatcagatccatgatgttcttacaagtttggatataaaa
ccaattgatattaaacagccattaattgcaaaagaagctaatactacaccgaaagatgaa
aatgatacggcaactgctggcgtatctttgttgacaaatcaagttttggatgatttcata
tcttccgtaccgcaacctgccggtgttgtaagctggtcaccacctcagccgaattggaat
ccatggactggatgtaatatagatgaaggaccactagcaacaatatctttggataagttg
tcagaagatttattaaacgaacagagagataagctgcagcaggatgttaatatacagacg
agcatcaaggaaagatcgaatctgcccgttttcaacaaaaaaaacgagatcatgaatgta
gttaacgaaaatccgattgttatcatacgtggtaatacgggatgtggtaagactacgcaa
gtttgccagttcattctggatgattatatcgcatctggccaaggtgcatattgcagtata
gttgtcactcaacctagaagaatctctgccgtatctgtggcagaccgagttgccgtcgag
agatgcgagtctctgggacagtcagtcggatattctgtgaggtttgagtcgtacttaccg
agaccctatgccagtataatgttttgcactgtgggtgtactcttaagaaagctggaaggt
ggccttagaggagtgtcgcacgttatagttgatgagattcacgaacgagatgtcaattcg
gatttcattatggtggtgctcagagacatgatccatctctatcccgatcttagaatcatc
ctcatgtctgctacaattgatacaacattgtttagcgaatacttcaacaaatgtcctgtg
gtggagattcccggcagatcgtatcctgttcagcaatatttcttggaggactgtattgag
ctgacaaaattttatccgcctacaggttctggaaaacgtaaatctaaggaatcagacgat
ttaccaataccggacgcagaaccggaagaaaacctgaataaagtcatcagtactggttat
tctaatgaaacaaagaacgctatgggacagctgacagagaaagagataagctttgagtta
atagaagcgttacttacgtacattaaagtacaagatatttcaggtgctgtgctgatcttc
ctccctggatggaatttgatattcgcattgatgaaacaccttcaacaacatactcttttt
ggcggatcgtcttatcttattatcccattacactcgcaattaccgagagaagatcagcgt
aaagtctttgatcctgtcccgtcatttgtaacgaagattattttgtccacaaatattgca
gaaacttcgatcacgatcaacgatattgtctacgttatagattcttgcaaggccaaaatg
aagctattcacttcgcacaataatatgactaattatgcaactgtttgggccagtaaaaca
aatctggaacaacgcaagggtagagcaggtcgcgttagacccggtttctgtttccatttg
tgctcaaaagctcgatttgataagatggacgaacatatgacaccagaaatgtttaggacg
cctctgcacgaactggcgttgagtatcaagctgttaagattaggcaatatcggtcaattc
ttgtcgaaagcaatcgagccgcctcccattgacgccgtgattgaagcagaagttgtatta
agagaaatgaaatgcttggataaaaacgacgaattaacgcctctcggcaaaattctggcg
cgtttacctatagaaccgcggctaggaaaaatgatgatcctaggatgtatgttccgcgtg
ggtgacgcgctctcgacgatggccgcgaatagcaccactttccctgaggtatacaacatg
ggtccggatatgaaaaggctgactgctcagcagaagtggtttgctggtgctaggtttagc
gaccatgtcgcaatgtttcatgcttttcaagcatgggaggaagcgagaacaggtggcgaa
tgggcagaacagacgttctgcgattcaaagagcctgagtttaccaactttacgaattact
tgggaagctaagaatcaactacaagcgttattgcaaagctccggttttcccgaggagact
ctgtgccccatgccattaaattatcaagcaagcgcggacccgcgtctcgacaccatcacc
gcgctattatgcatgggcctatatcccaatgtgtgctatcacaaggagaaacggaaagtt
cttaccacagaatcgaaggctgcgctgattcacaaaacatcggtgaattgcagcaatttc
gagcaaaactttccattcccgttcttcgtatttggtgaaaagattcgtacgagagctgta
tcttgcaaacaaatgactatggtatcacctatacatctattactattcggatcacgaaaa
gtagaatatatagatggtgtgattagactggacaactggatcaacttggatatgaatccg
caacatgcagcagctattgttgctctaagaccagctttggaaagtcttgtagttcgagca
tccaaggatccagaaacgattttagagttgagtccgactgaagaaaaggtactaagtgtg
attaaagcattatgcaacatgaatgcttgtcggcacgagctggagccgataaccagtagt
agtttacaatcatcgcgacccccgagaggacacgtaaccggttttcgtgctaattataac
acacctccaaaactgatgcgaggaaatggaggtttccgcggcccagtctcgaataacgaa
tcctacggcggacatagtggtggctttaatgataaccgcagcggcggttacagaggaggt
ttcaacaacaggggatacgccatgggcggtttgcgcggccgaggtggaaactggaatagt
ggcaatcgcggacgttactaa
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