KEGG   Cyphomyrmex costatus: 108781077
Entry
108781077         CDS       T11118                                 
Name
(RefSeq) TNF receptor-associated factor 6-A-like isoform X1
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
ccoa  Cyphomyrmex costatus
Pathway
ccoa04013  MAPK signaling pathway - fly
ccoa04120  Ubiquitin mediated proteolysis
ccoa04140  Autophagy - animal
ccoa04144  Endocytosis
ccoa04214  Apoptosis - fly
ccoa04620  Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108781077
 09130 Environmental Information Processing
  09132 Signal transduction
   04013 MAPK signaling pathway - fly
    108781077
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108781077
   04140 Autophagy - animal
    108781077
  09143 Cell growth and death
   04214 Apoptosis - fly
    108781077
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    108781077
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccoa04131]
    108781077
   04121 Ubiquitin system [BR:ccoa04121]
    108781077
Enzymes [BR:ccoa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108781077
Membrane trafficking [BR:ccoa04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    108781077
Ubiquitin system [BR:ccoa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    108781077
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-C3HC4 zf-C3HC4_2 zf-C3HC4_4 zf-RING_UBOX U-box zf-RING_2 zf-C3HC4_3 RING_XB3-XBAT31 zf-RING_5 zf-rbx1 zf-RING_6 zf-ANAPC11 zf-Nse Prok-RING_4 Sina_ZnF Zn_Tnp_IS91 TRAF3_RING
Other DBs
NCBI-GeneID: 108781077
NCBI-ProteinID: XP_018404455
UniProt: A0A195D350
LinkDB
Position
Unknown
AA seq 360 aa
METSESSVEPAKVAEESENCEESIKGYVEPRFECPICLTWLRDPVLTSCGHKFCSQCIYT
WLKKEGACCPVDSQPLKSENLFPDLYTTREISQKRTSCIYQQFGCQVKLSPVDMETHITQ
CTYKRDISEPRVQNGTNAMSVESKLWDPVKNRTQVADKEEPSPDWQQLLKNLYERIIVLE
QENRELSITVSNQKNQLAAMCLRNCNGVYIWRLKSFQEKLDAMINDPQKMFYSPGFYTSP
NGYKICARINISSKDPDYLSFLLHIMKSENDDALDWPFNGTMFFALVHPQNSEQNICEKT
SSISGLEAFQKPTYELNKRGFGYVEFIRVRDITDFLQHDTLIFKIEVYPMSYRDNTKKLL
NT seq 1083 nt   +upstreamnt  +downstreamnt
atggaaacatcagagagctcagtagaacctgctaaagtcgccgaggaaagcgaaaattgt
gaggagagcatcaaaggctatgtagagcctagatttgaatgtcccatttgtttaacatgg
ctgcgcgatccagttttaacatcttgtggccataaattttgttctcagtgtatttacact
tggcttaagaaagaaggcgcttgctgtccagttgatagtcaacctttgaaatctgaaaat
cttttcccagatctttacaccactagagagatatctcagaaacgtacaagttgtatttat
cagcaatttggttgtcaagtaaaattgtcacctgtggatatggaaacgcatatcactcaa
tgcacatacaaacgagatatttcagagcctcgagtacaaaatggcactaatgcaatgtct
gtggagtcaaaattatgggatcctgtaaaaaataggacacaagttgcagacaaggaagag
ccttctcccgattggcaacaattgctcaaaaatctatatgaaagaataatagtcttggaa
caagaaaatcgggagctctctataacagtatctaatcagaaaaatcagctcgcagctatg
tgtttacgaaattgtaatggagtttatatatggagattgaaatctttccaagaaaaactt
gacgctatgataaatgatcctcaaaaaatgttctatagtccaggtttttatacaagtcca
aatggatataagatttgtgcaaggattaatatatcatccaaggatcccgattatctgtct
tttcttttacatattatgaaatcagaaaatgacgacgctttggactggccgtttaatggc
acaatgttttttgcgttagtacatccgcaaaattcggaacaaaatatatgcgaaaaaaca
tcgtcaatatcaggtcttgaggcattccaaaaacccacgtacgaattaaataaacgtggc
ttcggttatgtagaatttatacgtgtacgtgacataactgattttctgcagcacgatact
ttaatttttaaaattgaagtttatcctatgtcttatagagataacaccaaaaagttatta
tga

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