KEGG   Cyphomyrmex costatus: 108782653
Entry
108782653         CDS       T11118                                 
Name
(RefSeq) jmjC domain-containing histone demethylation protein 1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
ccoa  Cyphomyrmex costatus
Pathway
ccoa03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:ccoa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    108782653
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccoa03000]
    108782653
   04121 Ubiquitin system [BR:ccoa04121]
    108782653
   03036 Chromosome and associated proteins [BR:ccoa03036]
    108782653
Enzymes [BR:ccoa01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     108782653
Transcription factors [BR:ccoa03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    108782653
Ubiquitin system [BR:ccoa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     108782653
Chromosome and associated proteins [BR:ccoa03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    108782653
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     108782653
SSDB
Motif
Pfam: PHD_4 zf-CXXC F-box-like JHD F-box LRR_4 JmjC Cupin_8 LRR_FBXL18 LRR_Zer-1 LRR_6 PHD LRR_At5g56370 LRR_EndoS Rubredoxin LRR_8 LRR_14
Other DBs
NCBI-GeneID: 108782653
NCBI-ProteinID: XP_018406470
UniProt: A0A195D3F1
LinkDB
Position
Unknown
AA seq 980 aa
MSAMADDSAPLPKRRQLRERTRKLYTDDWTIGDEEIEGRRTFQLDEKIEAKRYDLSNFSG
LFREMTGPELNLTYLQKHGLQIPLLFKDKSGLGLRVPSSNFSVNDVRTCVGSKRVLDVMD
VNTQKNEDMTMKEWQKYYEDPNKERLLNVISLEFSHTKLENYVQSPSLVRQVDWVDVVWP
RHLKESQVESTNLLEDMMYPKVQKYCLMSVKGCYTDFHVDFGGTSVWYHILHGGKIFWLI
PPTEKNLTLYQEWVLSGKQSDVFFGDMVDKCGRISLTAGMTLFIPTGWIHAVYTPQDSLV
FGGNFLHSFGIEMQLKVAQVEEHTKVPQKFRYPFFTEMLWYVLERYVHVLLGRSHLDISE
SQRQHLVPQHHQHIHVTDFELHGLKSIVMYLHSLPSTKKNVPELMRDPVALIHDVRCLVE
QHRHDNPESAVTGNPVLPPPPPLTIVDRERMRVARKGFAKSQRHHSDKSERAFPRRRRTR
CKKCEACTRQDCRECVFCQDMVKFGGSGRAKQTCLMRQCLRPMLPVTSACKVCRLDGWKQ
PPAPLTGKSFPTTPSTLMECSICFDIVHPECIGLNSKEITVNDDLPNSWECPECFERGRN
LDCRPRHPRGRTRKLSISSAASSAPTTDSERAMTPSKQSRLDPNDAWNDSPREPAEGEQR
MTQQRTQLAMQLIASSSRSLVKPHVVVRPAPPPPIQETDGENEQNLIYNETAVLSVFRFL
DIKDLLNCALVCRTWARYSVNPSLWKKLDMSHYNLRSIHLTVIVRRQPEYLSLDWTNINK
MQLAWLLSRLPQLRTLSLQGCTWAGVRALKSSSCPPLEKLNLSYVTSLNDTVLQEILDSP
TDSRPGLIDKTSRLKHLKNLSLAGCDLTDRGVRYIVQQLSDLETLDLSSIGRLTDSGVAH
LTSLSNLASLNLANCKLLTETTLDHLARCKALKRLDLRHTTQVSTQAVIKFAAKSEHNLH
VTDVKLVEEKKKVRPDFMDT
NT seq 2943 nt   +upstreamnt  +downstreamnt
atgtccgcaatggccgacgactccgcaccgctgccgaagaggcgccaattgcgcgagcga
accagaaagttgtacacagacgactggaccataggcgatgaagaaatcgagggtcgcagg
acttttcagcttgatgagaagattgaggccaagaggtatgacttgagcaatttcagtggc
cttttccgcgagatgactgggccggagctgaatctaacgtacctgcagaaacatggtctg
cagataccactattgttcaaggataagtctggattgggcttgcgagtacccagctccaac
ttttctgtcaacgacgtcagaacctgtgttggttctaagagagtacttgatgttatggac
gttaatactcagaagaatgaagatatgactatgaaagaatggcaaaagtattacgaggat
cccaacaaggaacgcttgttgaatgtgatctcattagaatttagtcataccaagttagag
aattatgtacaatcgccttcacttgtgcgacaagtagattgggtagatgtagtatggcca
aggcatctaaaggagtctcaggtggaatctacaaatcttctagaagatatgatgtaccct
aaagtacagaagtattgcttgatgtcagtaaaaggttgttatactgactttcatgttgat
tttggtggtacaagcgtatggtatcatattctgcatggtggtaaaatcttttggttaatt
ccacccactgagaaaaacttgactctctatcaggagtgggtgttgagtggtaaacagtca
gatgtattctttggtgatatggtagacaaatgtgggaggataagtttaacagctggtatg
actctgtttataccaactggttggatacatgcggtatatactcctcaggattctttggtc
tttggtggaaattttcttcacagttttggtatagaaatgcaattaaaagtggcacaagta
gaggagcatacaaaagtaccacaaaaatttcgatatccattcttcacagaaatgttatgg
tatgtcctcgagagatatgtacatgtactgttgggtagaagtcatttggatatatctgaa
tcacaacgacaacacttggtcccacaacatcatcaacatatacatgtgacagatttcgaa
ttacatggcttaaaatctatagtaatgtatttgcattcattaccatcaactaagaagaac
gttccagaattaatgcgtgatccagttgctcttattcatgatgttcgatgtttggtagag
cagcatagacatgataatccagaatcggctgtgacgggcaatcctgtgttacctccacca
ccacccttaaccattgttgacagggaacgcatgagagttgcgagaaaaggttttgcaaaa
tctcagagacatcactcagacaagtccgagagagcgtttccacgtaggagacgcactaga
tgtaagaagtgtgaggcttgcactagacaggactgtcgagaatgcgtattttgccaagat
atggtcaaatttggcggtagtggtcgagctaaacaaacatgtctcatgcgtcaatgtctt
agacctatgcttcccgtcacatcagcctgtaaagtctgtcgtttagatggttggaaacaa
ccacctgcaccgttgactggtaaatccttccccacaacaccatctaccttaatggaatgt
tcaatctgcttcgacattgtacatccagaatgtataggtttgaattccaaggagataacc
gttaacgatgatttgccaaatagttgggaatgtccagagtgttttgaacgaggtcggaac
ttagattgtcggccacgtcacccaaggggtcgcacgcgaaaattatcaatatccagtgcg
gcttcctcagcaccgacgacggattctgaacgggctatgacaccgagtaaacaatcgaga
cttgatcctaacgatgcgtggaacgattcgcccagggagccagccgaaggtgaacagaga
atgactcagcagcgtactcagttagctatgcagttgattgcctcgagcagccgatcttta
gtgaagccacacgtagtggttaggcctgcgccgccaccacctattcaagaaacggatggc
gaaaatgaacagaatttgatatataacgagacagcagtgctttcggtattcagattcctt
gatataaaggatctgcttaattgtgccttggtttgccgtacctgggcgagatacagtgta
aatcccagtctgtggaagaaacttgacatgtctcattataaccttcgttccatacacttg
acggttattgtccgccgacaacccgagtatctttcgctggactggaccaacattaataag
atgcaattagcttggctgctgagtaggttaccgcagttacggacattgtctcttcagggt
tgtacttgggccggtgttcgtgccctgaagagtagtagctgtccgccactagaaaagctg
aatctgagttatgttacctctttgaatgatactgttttgcaagaaattctggactctcca
acggactcaagacctggccttatcgataaaacatcacgattgaaacatctcaagaatctg
tctttagccggatgcgatctgacagatcgaggagtgagatatatagtccagcaattatcg
gatcttgaaactttagacctctcctcgattggcagacttaccgactccggagtagcgcat
ctgacgtcgctatcaaatctggcgtcgctcaacctagcaaattgcaagttgctcactgaa
acgactcttgatcatctagcgagatgtaaagccttaaaacgcttggatctgcgacataca
acccaagtatcgacgcaagctgtcatcaaatttgctgctaagagcgagcataatttacat
gtaacagacgttaagctggtggaggagaagaagaaagttagacccgattttatggacacg
tga

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