Conger conger (European conger): 133108198
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Entry
133108198 CDS
T10633
Name
(RefSeq) rho guanine nucleotide exchange factor TIAM1-like isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
ccog Conger conger (European conger)
Pathway
ccog04530
Tight junction
ccog04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133108198
09142 Cell motility
04810 Regulation of actin cytoskeleton
133108198
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccog04990
]
133108198
Domain-containing proteins not elsewhere classified [BR:
ccog04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
133108198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PDZ_6
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
133108198
NCBI-ProteinID:
XP_061073631
LinkDB
All DBs
Position
13:complement(21526774..21609531)
Genome browser
AA seq
1587 aa
AA seq
DB search
MGNVESQNGDQAFYGGGPGQLSRKHMSRSLRLSGKQSRRSRQPSSGKLEHRNSETSTRSS
STPSIPQSLAESGLEPFNEGGPLLPHFGSPIWVDRVAMNLRPVSFHPELAAGRGTGRGGP
ERDGGGVYLQRTSDGARDSSSFKKKRSKSADMWREDSLEFSLSDLSQDQLTSTEEIAQER
DYCRGLLPASPEGLGPLDPGDRANSMDQLYDPKTPPRRPSHPHHRFAKFSPREGGGGRGR
GRGGPHTGLQGLDDKGAAEDDGNAYGAYTLPCRRSHCLSEGPSVQQGVLCASMHGRRAQT
TQDVTAGEGSEFGDSGIDGVTLEAEPDWRRYKTASPSGGGASARGQGVYENFRQELEMSS
CCPSDAQEEAGSDEHSTGTVSSAGQSDALLGVTQGTVRKAGALAVKNFLVHKKSRKVELA
ARRKWKHYWVSLKGCTLFFYETDGRSGIDHTSVPKHAVWVENSIVQAVPEHPKKDFVFCL
SNSLGDAFLFQTSSQTELENWITAIHSACAAAVARQHHREDTLRLLRAELRKLEQKIDMD
EKMKKMGEMQLSAVTDAKKRKTILEQIFLWEQNLEQFHMDLFRFRCYLASLQGGELPNPK
RLLAFASRPSKLAMGRLGIFSVSSFHALVAARTESGVRRRTQAMSRSSSKRKSRFSSLWG
LDTTSKKKTKGRPSINQVFIDGEEPVKKSPDGMLENAARESAKEKEGTLKSIPQHNADSD
IWVPEHLTPSWVCLPNDQPVLATIQPGESALDTLETVCKAHHLDLAKHYLRLKFFIDNQV
QFYVPKPEEDLCDLLYKEIEICSKVTKLVRFDRDESCSIGYGFSISVLEEDGVQQLYITE
VKAGGLAFAKGLNAGDEILQLNGKEGSTLNFSDMKVAFSQNSLGLTVSTLPPMDRHQLCY
LPPRRSHGEDELYTDIFSQSQEDILDDGPGLCLLSPGDSLDEEYDIFDEIEDNVKSTEQV
AAFCRSLHDMDPSECAPCSPESPQPPAATPRQLSDADKLRKVICELVETERTYVKDLNCL
IERYLTPLQKESFLTQDELDVLFGNLAEMVEFQVEFLKTLEDGTRLVPDLERLERVDQFK
KVLFSLGGSFLYYADRFKIYSAFCAGHTKVPKVLVKAKTDPDFKAFLDARNPRQQHSSTL
ESYLIKPIQRVLKYPLLLKELYSLTDPDSEEHYHLDVAVKAMNKVASHINEMQKIHEEYG
AVFDQLIAEQTSDKKEVADLSMGDLLLHTTVTWINPPASLGKWKKDPELVAFVFRTAVVF
VYKDCSKQKKKIGGSHRASVSDEKDPFRFRHMISTDALQVRSLASADGEGNAVCEIVHVK
SESEGRPERTFHLCCSSPESKKDFLKTVHSILRDKQRRQLLKTESLPPSQQYVPFGGKRL
CALKGARPTMNRAVSAPARTLGRRKLVRNRFTIDTDIVFDSDPTERPPSSQQPLGGDTDR
WVEEQFDLERYEDQEPADVKETDILSDEDEEFCQTSSKEPSVEEPELETPELEDPVSALS
LEQEEQEDQWGQEEEEEVGDGSGKGDGAGETSQDTVSQVSPADTHSPPGSPTNQRTASGL
NGSTEGAEGEEVIWVRRDDFNTQSDEV
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatgtagagagccagaatggcgaccaggccttctacggcggcggcccgggccag
ctgtcccggaagcacatgtcccgttccctgaggctctccgggaagcagtcacggcgttcc
cggcagccgtcctccgggaagctggagcaccggaactcggagacgagcacgcgctcgagc
agcactcccagcatcccgcagtccctggccgagagcgggctggagcccttcaacgagggc
gggccgctcctgccccacttcggcagccccatctgggtggaccgcgtggccatgaacctg
cggcccgtgtccttccaccccgagctggcggcggggcgcgggacggggcggggcggcccg
gagcgggacggggggggcgtgtacctgcagaggaccagcgacggggcccgcgactcctcc
agctttaagaagaagcgctccaagtccgcagacatgtggagggaggacagcctggagttc
tccctgtccgacctgagccaggaccagctcaccagcaccgaggagatcgcccaggagagg
gactactgcaggggtctgctcccagccagccccgagggcctggggcccctggacccgggg
gacagggccaactccatggaccagctctacgaccccaagaccccccctcgccgcccgtca
cacccccaccaccgcttcgccaagttctccccccgcgagggaggtgggggccggggccgg
ggccgggggggcccgcacacggggctccagggcctggacgataagggcgccgccgaggat
gatgggaacgcgtacggagcgtacaccctgccctgccgccgctcacactgcctgtctgag
ggcccgtctgtccagcagggggtgctgtgtgccagcatgcacggccgcagggctcagacc
acgcaggatgtcacggcgggggagggcagtgagttcggcgacagtggcatcgacggggtg
acgctggaggcggagcctgactggcggcggtataagacggcgtcgccctcggggggcggg
gcctcggcacgcgggcagggcgtgtacgagaacttccgccaggagctggagatgagctcc
tgttgccccagcgacgcccaggaggaggcggggtcggacgagcacagcaccggcactgtc
agctcggccggccaatcagatgcgctgctgggcgtcacccagggaaccgtgcgcaaggcg
ggcgccctcgccgtgaagaacttcctggttcacaagaagagcaggaaggtggagctggcc
gcccgccgcaagtggaagcactactgggtctccctcaaagggtgcaccctgttcttctac
gagacagatgggcggtctgggatcgaccacaccagcgtcccgaaacacgcagtctgggtg
gagaacagcatcgtgcaggccgtcccagaacaccccaaaaaggactttgtgttctgcctc
agcaactccctgggagatgccttcttgttccagacctccagccagacggagctggagaac
tggatcacggcgatccactcggcctgcgcggccgccgtcgcccggcaacaccaccgcgag
gacacgctcaggctgctccgggccgagctcaggaagctggagcagaagatcgacatggac
gagaagatgaagaagatgggcgagatgcagctgtccgccgtcaccgacgccaagaagagg
aagaccatcctggagcagatcttcctgtgggaacagaacctggagcagttccacatggac
ctgtttcggttccgctgttacctggccagcctgcagggcggcgagctgcccaaccccaaa
cgcctgctggcctttgcctcgcgcccctccaagctggcaatggggcggctgggcatcttc
tccgtgtcctccttccacgcgctggttgcagctcgtacggagagcggagtgaggaggcgc
acacaggccatgtcccgctcctccagcaagcgcaagagccgcttctcctccctctggggt
ctggacaccacctccaagaagaagaccaagggccggcccagcattaaccaggtgttcatc
gacggagaagagcctgtgaagaagagcccggacggcatgctggagaacgctgccagggag
agcgcgaaggagaaggagggtaccctgaaaagcattccccagcacaacgcagacagcgac
atttgggttcctgagcacctcacgccttcgtgggtctgcttgccgaacgaccagcccgtg
ctggccaccatccagcccggagagtcggccctcgacaccctggagaccgtctgcaaggct
catcacctggacctcgccaagcattacctgcgtctgaagtttttcatcgacaaccaagtg
cagttctacgtgcccaaaccggaagaggacctgtgtgatttgctctacaaagagatcgag
atttgctccaaggtgactaagctggttcggtttgaccgtgatgaatcctgctcgattggt
tacggtttctccatctcagtgttggaggaggatggtgtgcagcagctctatatcacagaa
gtgaaggcggggggactagccttcgctaaagggctgaacgcgggagacgagattctccag
ctgaacgggaaggaggggagcacactgaacttctccgacatgaaggtggcgttttcccag
aattccctgggcctgactgtcagcaccctgccccccatggaccgccaccagctctgttac
ctgcccccccgccgctcccacggtgaagacgagctctacaccgacatcttctcccagagc
caggaggacatcctggacgatgggccaggcctctgtctgctgagccctggggacagtctg
gatgaagagtacgacatcttcgatgaaatcgaagacaacgtgaagagtacggagcaggtg
gctgcgttctgccggagcctccatgacatggacccgtcggagtgcgccccctgcagcccg
gagtctccccagccccccgcagccacccctcgccagctctccgacgccgacaagctccgc
aaggtcatctgcgagctggtggagacggagaggacctacgtcaaagaccttaactgcctg
atcgagaggtacttgactccgctgcagaaagaaagcttcctcacacaggatgagctggac
gtgctcttcgggaatctggccgaaatggtggagttccaggtggaatttctcaagactctg
gaagacgggaccagactggttccagatctggaacggcttgagagggtggatcagtttaag
aaagtgctcttctcgctgggcgggtcgttcctgtactacgccgaccgcttcaagatctac
agcgccttctgcgccggacacaccaaggtccccaaggtcctcgtcaaagcgaagacggat
cccgatttcaaggccttcctggatgcccggaaccccagacagcagcactcctccacactg
gagtcctatctgatcaagcccatccagagagtgctgaagtaccccctccttctgaaggag
ctgtactccctcactgaccccgacagcgaggaacactaccacctggacgttgcggtgaaa
gccatgaacaaggtggcgagccacatcaacgagatgcagaagatccatgaggagtatggc
gctgtgttcgaccagctcatcgccgagcagaccagcgacaagaaagaggtggctgacctg
tcgatgggggacttgctgttgcacacgactgtcacatggatcaaccctcctgcatccctg
gggaaatggaagaaagatccggaactggtggcattcgtcttcagaacagccgtggtgttc
gtgtacaaagactgctccaagcagaagaagaaaataggcgggtctcatcgagcgtcggtc
tccgacgagaaggacccattccgcttccgtcacatgatctccaccgacgccctccaagtg
cgatccctggccagcgctgacggagagggaaatgcggtgtgcgagatcgttcacgtgaag
tccgagtcagagggaaggccagagagaacattccacctttgctgcagttctccggagagt
aaaaaagactttctgaagacggtgcactctatcctgcgggacaagcagcgcaggcagctc
ctgaagacagagagtctgccccccagccagcagtacgtcccgttcggcgggaagcgcctc
tgcgccctgaagggggctcgaccaaccatgaaccgcgcagtgtctgccccggcccggacc
ctggggcggcggaagctagtgcggaaccgcttcaccatcgacacggacatcgtgttcgac
agcgacccgacggagcgcccgccctcttcccagcagcctctgggaggagacacggaccgc
tgggtggaggagcagttcgacctggagcgctacgaggaccaggagcccgccgacgtcaag
gagactgacatcctcagcgacgaggacgaggagttctgccagacctcctccaaagagccg
tcggtggaggagcctgagctggagacccccgagctggaggaccccgtgagtgccctgtcc
ctcgagcaggaggagcaggaggatcagtggggtcaggaggaggaggaagaggtgggtgat
gggagtggtaagggtgatggtgcgggggaaacctctcaggacacagtgtcccaagtgagc
cctgcggatacacactcccccccggggtcccccaccaatcagaggaccgcgtccggcctg
aacgggtcgacggagggggctgagggggaagaggtcatctgggtccgcagggacgatttt
aacacccagagcgacgaggtctga
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integrated database retrieval system
