Conger conger (European conger): 133113991
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Entry
133113991 CDS
T10633
Symbol
smcr8a
Name
(RefSeq) guanine nucleotide exchange protein smcr8a
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
ccog Conger conger (European conger)
Pathway
ccog04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133113991 (smcr8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccog04131
]
133113991 (smcr8a)
Membrane trafficking [BR:
ccog04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
133113991 (smcr8a)
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Gene cluster
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
133113991
NCBI-ProteinID:
XP_061079168
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Position
16:complement(12258383..12264869)
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AA seq
908 aa
AA seq
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MIGSPDLVAFTKDDDFGETDVDPCLLPDEFSVPLFTHAGNSNPWSKTSYAKFARDFILIS
EFSEQVGPQPLLTIPDESKVCGTFDLNYFSLRIMSVDYQASFVGHPPGCNYPKLNFVEDS
KVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADESKIMQQFQQLSTEFSKASE
WLKTGNRKAFASELIKKLKDLEYTRTVLHKETELQKKNSGCYSTQVIDKANELANVEKSI
YEHKDLLRQITSYPSRKRIDCEFPQESDDPATSAEMDKKATPTECSPEVSPEAITGKRRP
SYTPQLIKGKSAKCFDKRLKTLEELCDSYFFHQTMEQLRLIESAFRGDLCHIYTNQISQA
LLKKQKITNFLYEVYNDWEDEAVSKPSFAGNLPPPTPLLLGAPQSPEAVHADLDAETSVE
KPQEAELTESSPSDLTQENSDEGTDAEMKVSSGSSGESVDAAGPERPEKHSEAEAVPQAF
CPDVVEGNAAGTVDDGEDNDERVSATDSPSPEHNRASYQSAIHEQEPSVKVDGDMGGDEP
KSPGLTQDLDLTGDSVLQASTMVQADASCCMGQEKLQYEEPSPELAENGFPDRVVKREPQ
SCLQGDLTLGKAVTAEDSPAVPNALNSDGLSDDMFRMNLDDLSDATSFMSASTNSDRLSS
PCHYSNPVTLKQKKRAGQNALRFIRQYPFSQQAIFCVLTGRTLVVLGADERTVRKLVNAL
SIFVPNLGKYGETVQPWLSCPFQLTDLQNWKIIGLHRMASPTGSSMLHSLNRYARYIGVL
DADQKTLRCPPYRGSLIGNMANHRTQIKRGSTYFMHVQCMLTQLYSKAFLYTFCHHLHLP
ISLSEDQETVASRRSSFLHQQLGYNEEDSKMIQFLSELIKQSYLQGPGRMVHPPGFCFSY
IPSFVHKI
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgattggctcacctgatttggtggcatttaccaaagatgacgattttggggaaacagat
gtggacccctgcttactcccagatgagttttcagtgcctctattcacacacgctggaaat
tccaacccttggtcaaagacttcctatgctaaatttgcccgggattttattctcatatct
gagttttcagaacaagttggtccacagcccttactcaccatcccagatgaatccaaagtg
tgcggaacgtttgatctgaactatttctctctccggatcatgtctgtggattaccaggcc
tcttttgtcggacaccctccggggtgcaactacccaaaactcaattttgtggaggactca
aaagttgtgcttggcgattcgaaagaaggggcatttgcgtacgtccatcacctcaccctc
tatgacctggaggcccgtggttttgttcggcctttttgcatggcttacatttcagctgac
gagagcaaaattatgcagcaatttcaacagctctccactgagttctccaaggcctcggag
tggttgaaaacaggaaatcggaaagcatttgcaagtgagctgatcaagaaactgaaggac
cttgaatacaccagaactgtgttgcacaaggagactgagctgcagaagaagaacagtggc
tgctactcaacacaggtgattgataaagccaacgagctggcaaatgttgaaaaatccata
tatgaacacaaagatcttttgaggcagatcacatcctatccaagcaggaagaggatagac
tgtgagtttcctcaggagtcagacgaccctgccacctcagccgaaatggacaagaaagcc
acccccacagaatgttcccccgaggtttctccagaggccattactggcaaacgcagaccc
tcttatacccctcagcttataaaaggaaagtctgccaagtgcttcgataagaggctgaaa
acgctcgaggagctctgcgattcatacttcttccaccagacaatggaacagctgagacta
atagagagtgcattccggggagacctgtgtcacatttacaccaatcagattagccaggcc
ttgctgaagaagcagaaaatcacaaacttcctctatgaagtgtacaacgattgggaggat
gaggccgtttcaaaaccgtcctttgcggggaatctgcctcctcccacccctctcctgttg
ggggcaccgcagagcccagaggctgtgcacgctgacctggacgcagagactagtgtggaa
aaacctcaggaagcggagttgaccgagtccagccccagtgacctcacccaggagaattct
gacgaaggcactgatgcggagatgaaggtgagcagtgggagcagtggcgagagtgtggat
gcagccggtcctgagagacctgagaaacactctgaagctgaagcagtccctcaggcgttc
tgtcccgacgttgtcgagggcaatgcagcgggcacggtggatgatggggaggacaacgat
gagcgggtaagcgccaccgattcaccttcgcctgagcataaccgagcatcttaccaaagt
gccattcatgagcaggaaccttctgtgaaggtcgacggtgacatgggcggtgacgaaccg
aaatcccctggccttacacaggacctggacttgactggtgacagtgttttacaagcgagc
acaatggtccaagcagatgcctcatgctgcatggggcaggagaagctccagtacgaagag
ccttcccctgagctggcagagaatggctttcctgatagagtcgtcaagcgggaaccccag
tcttgcctgcagggggacctcactctcggtaaggcagtgaccgctgaagactccccggct
gtgcctaacgcactgaactctgacggcctctcggatgacatgttcaggatgaatctggac
gacctctctgacgctaccagcttcatgagcgcctctactaattccgacaggttgtcgtct
ccctgtcactatagcaaccctgttactttgaaacaaaagaaaagggctggacagaatgct
ctgaggttcataagacaatacccattttcccagcaagctatattctgtgtcctgaccgga
aggaccctggtggtcctgggagctgatgaaaggaccgtgagaaagctggtaaacgcctta
tctatctttgttcccaatctcggcaaatatggtgaaacggtccaaccttggctttcctgt
cctttccaactgaccgatctgcagaactggaagatcattggccttcacaggatggcttct
cccactggttccagcatgctccactcgctgaaccgctacgcccgctacattggcgtgctg
gatgccgaccaaaagacgctccgctgcccgccttacaggggctccctgattggcaacatg
gcaaaccaccggactcagatcaagcgcgggagcacgtacttcatgcatgtgcagtgcatg
ctgactcaactctattccaaggcttttctctacactttctgccaccacctccaccttccc
ataagcctcagcgaggaccaagaaactgtggcttcccgcaggtccagctttctgcaccag
caattgggctacaacgaggaggacagcaagatgatccagttcctctcagagctgataaaa
cagtcctaccttcaggggcctggcagaatggtccacccaccgggattttgcttcagctac
attcccagcttcgtgcacaaaatttag
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