Conger conger (European conger): 133114304
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Entry
133114304 CDS
T10633
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component isoform X1
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
ccog Conger conger (European conger)
Pathway
ccog03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133114304 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccog03041
]
133114304 (eftud2)
Spliceosome [BR:
ccog03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
133114304 (eftud2)
Complex C
U5 SnRNP specific factors
133114304 (eftud2)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
133114304
NCBI-ProteinID:
XP_061079551
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All DBs
Position
16:complement(33139581..33161698)
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AA seq
990 aa
AA seq
DB search
MFLQFPFNYCLENKRSGLLTMETDLYDEFGNYIGPELDSDDDDDLGPDDHDADEADEDED
EEPADADDDAPGMEVVLHEDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKQF
TLMEQELPATVYDMEFLADLMDSPELIRNITLCGHLHHGKTCFVDCLIEQTHPEIRKRDD
SDLRYTDILFTEQERGVGIKSTPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSGIRIS
DGIVLFIDAAEGVMLNTERLIKHAVQERLAITICINKVDRLIVELKLPPTDAYYKLRHIV
DEVNGMLSTYSTDENMVVSPLLGNVCFASSQYSICFTLGSFAKIYSDTYGDINYNEFAKR
LWGDIYFNPKTRKFTKKAPNSSAQRSFVEFVLEPLYKILSQVVGDVDTSLPRVLDELGIH
LTKEELKLNIRPLLRLVCNRFFGEFTGFVDMCVQHIPSPHGGARNKIEHSYTGGLDSDLG
EAMAECDPDGPLMCHTTKMYSTEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLEDEEDS
QVCTVGRLWISVARYQVEVNRVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKF
NTASVIKIAVEPVNPSELPKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMH
DLRKMYSEIDIKVADPVVTFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIEN
EVVQITWNRKKLGEFFQTKYDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSV
KDSIVQGFQWGTREGPLCDEPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLM
ATPRLMEPYYFVEVQAPADCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFG
FETDLRTHTQGQAFSLSVFHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKG
LSEDVSISKFFDDPMLLELAKQDVVLNYPM
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgcagtttcctttcaattattgccttgagaacaagcgttcaggccttctcacc
atggagacggatttgtacgatgagtttgggaactacatcggcccagagttggactcagac
gatgatgacgatctggggccggatgaccatgatgcagatgaggccgatgaagacgaagac
gaagagccggcagacgcagacgacgacgccccggggatggaggtggtgctgcacgaggac
aagaagtactacccgacggcggaggaagtgtacgggccggaggtggagaccatcgtccag
gaagaggacacgcagccgctcacagagcccatcattaagcccgtgaagaccaagcagttc
accctgatggagcaggagctgcctgccacggtctacgacatggagttcttggcagacctg
atggacagtcccgaactgatcaggaacatcaccctgtgtgggcacctgcaccatggcaag
acctgctttgtggactgcctgatcgaacagacgcacccggagatccgcaagcgcgacgac
agtgatctccggtacacagatatcctcttcacagagcaggagagaggagtcggcatcaag
agcacccccgtcacaatggtactgcccgactcccggggcaagtcttacctcttcaacatc
atggacacaccaggccatgtgaacttctcagatgaggtgacgtcagggatccggatttca
gatggcattgtcctcttcatcgacgcagcggaaggggtgatgctgaacacggagcggctg
atcaaacacgcggtgcaggagcggctggccatcaccatctgcatcaacaaggtggaccgg
ctcattgtggagctcaaactcccgcccaccgacgcctactacaaactgcggcacatcgtg
gacgaggtcaacggcatgctcagcacctactccacagatgagaacatggtggtctccccg
ctgctggggaacgtctgcttcgccagctcccagtacagcatctgcttcaccctgggctcc
ttcgccaaaatctactccgacacctacggggacataaactacaacgagtttgccaagaga
ctgtggggagacatttacttcaatcccaaaacgcgcaagttcactaagaaggcccccaac
agcagtgcccagcgcagctttgtggagtttgtgctggagcccctctataagatcctgtcc
caggtggtgggggatgtggacacctctctcccgcgggtgctggatgagctggggatccac
ctgaccaaggaggagctgaagctcaacatccggcccctgctgaggctggtctgcaaccgc
ttcttcggagagttcacagggtttgtggacatgtgtgtgcagcacatcccctctccacac
gggggcgccaggaacaagattgagcacagctacaccgggggcctggactctgacttgggg
gaggccatggctgagtgcgacccggacggccctctgatgtgtcacaccacaaagatgtac
agcacggaggacggggtgcagttccacgcgttcgggcgggtcctcagcggcaccatccag
gcggggcagcccgtcaaggtcctgggcgagaactacaccctggaggacgaggaggactcc
caggtctgcaccgtggggcggctctggatctctgtcgctaggtaccaggtcgaggtgaac
cgggtcccggccggaaactgggtcctcatcgagggatgcgaccagcccatcgtgaagacg
gccaccatcacggagcctcggggcaacgaggaggcccagatcttcaggcctctgaagttc
aacaccgcatcggtcattaagatcgcagtggagccggtcaatccctcggagctgcccaaa
atgctggacggcctcaggaaagtcaacaagagctacccctccctcacaaccaaggtggag
gagtccggagagcacgtcatcctgggcaccggcgagctctacctggactgcgtcatgcac
gacctgcgcaagatgtactccgagatcgacatcaaggtggctgaccccgtggtgaccttc
tgcgagaccgtggtggaaacctcctcccttaagtgcttcgctgagacgcccaataaaaag
aacaagatcaccatgatcgctgagccgctggagaaggggctggcagaggacatcgagaac
gaggtggtgcagatcacctggaacaggaagaagctgggagagttcttccagaccaagtat
gactgggatctgctggctgctcgctccatctgggccttcggacctgacaccacggggccc
aacatcctggtggacgacacgctgccctctgaggtggataaagccctgttgggctcagtg
aaggacagtattgtgcagggcttccagtgggggaccagggaggggcctctgtgcgatgaa
cccatccgcaacgtcaagtttaaaatcctggacgcggtgattgcccaggagcccctccac
cgcggggggggccaggtcatccccacggcccgcagggtggtctactccgccttcctcatg
gccacaccccgcttgatggagccctattacttcgtagaggtgcaggccccggccgactgc
gtgtccgcggtctacactgtgctggcgcgtcggagaggtcacgtgacccaggacgctccg
atcccaggctccccgctctacaccatcaaggccttcatcccggccatcgactcgttcggg
ttcgagacggacctgcgcacccacacccaggggcaggccttctccctgtccgtcttccac
cactggcagatcgtacctggtgaccccctggataagagcatcgtgatccggcccctggag
ccacagcccgcccctcacctggcccgagagtttatgatcaagaccagacggcgcaagggt
ctgagtgaggacgtcagcatcagcaagttcttcgacgaccctatgttgctggagctggcc
aaacaggacgtggtgctcaattaccccatgtga
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