Conger conger (European conger): 133124198
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Entry
133124198 CDS
T10633
Symbol
lig4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ccog Conger conger (European conger)
Pathway
ccog03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
133124198 (lig4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccog03400
]
133124198 (lig4)
Enzymes [BR:
ccog01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
133124198 (lig4)
DNA repair and recombination proteins [BR:
ccog03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
133124198 (lig4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT_2
DNA_ligase_A_C
BRCT
RNA_ligase
C8-3_MUC4
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
133124198
NCBI-ProteinID:
XP_061091156
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All DBs
Position
3:63599790..63605855
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AA seq
909 aa
AA seq
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MAAALDTKSQSESSVASQVPFHDLCTTLEKIQKSKLRPEKIKCLREFLDSWRKFHAAVHK
DNPKTTDSFYPAMRLIVPSFERERMAYGIKENMLAKLYIDVLGLPKNGPEAHKLLNYRAP
TTSQGEAGDFALMAYFVLKKRCTNQGNLTIKEVNDFLDSVALNNASKQKDLVKKNLLHLI
TQSSALEQKWLIRMILKDMKLGMSKEGALHVFHPDAAELYNVTTDLDKVCRQLHDPSVSL
SEVSVGLFSAFRPMLAAVANVRQVERQMNHRSFFIETKLDGERMQLHKDGDVYKYFTRNS
YEYTQQFGATPLQGSLTPFIHNVFKTNVRNCILDGEMMAYNHTVDAFVQKGTKYDIKKLA
DDSELQTCFCVFDVLLLNDQKLGNETLKKRNEMLQTVFTPIKGRIQLVHKTEAKTMQEVV
DALNEAIDNLEEGIMVKDPLSIYKPDKRGEGWLKLKPEYMDGLMDELDLLIIGGYWGKGR
RGGMMSHFLCAVAETPEPGEKPSVFHSFCRIGSGYTMKELYDLGLKLAKHWKVYRKNDPP
ASILCTTEKPEVYIDPCDSVIIQVKAAEIVDSDMYKTNCSLRFPRIERTREDKEWHQCMT
LADLSQYRSKASGKLASRHLFINDDEPQKKKRKIVAKPKKAIGIIDHFKAQDLSGVAKET
DMFEDVEFCVMNGNDERSKADLEKGVASCGGIVVQNPGKDTYCVIAAVENMRVKNLVASD
QHDVVWATWLLECLERKQVVPWQPRHMIHMSPPTKEHFAKEYDQFGDSYSAETDEQQLKE
VFGRIQVKEEDLPSIADVEARYGLDDLPTSMFRPFRVYMDSCSDISDPKTFIQSSCLLTR
ALEFRFHGGVVEPKLVKGVSHVIVAEETRILQLRTLRRTFTKKFKIVRESWVKDSIKAGH
LLNDNDYLV
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcactggacaccaaatcacagtctgaaagctctgtcgcctctcaagtaccc
tttcatgatttgtgcaccactttggaaaaaatacaaaagtccaaactcagaccagagaaa
attaagtgtctgagagaattcctggattcctggagaaagttccatgctgctgtccacaag
gataatccaaaaaccacagactcattttacccagccatgcgtctcatagttccctcattt
gagagagagaggatggcctatggcataaaggaaaacatgctggctaaactctacatcgat
gtcttgggtcttccaaagaatgggcctgaagctcacaaacttctcaattaccgagctccg
actacatcacaaggagaagctggggattttgcccttatggcctacttcgtgttgaagaaa
aggtgcacaaaccaggggaatctaaccattaaggaggtgaatgacttcttggactccgtc
gctctgaataatgcgagtaagcagaaagatctggtgaaaaagaacctgctgcacctgatc
acccagagctcggccctcgaacagaagtggctgatccgcatgattctcaaagacatgaaa
ctggggatgagtaaagaaggggccttgcacgtgttccaccccgacgcggccgagctctac
aatgtcaccacggacctggataaagtgtgccggcagctccacgacccttccgtgtccctc
agcgaggtgtctgtcgggctcttctcagcttttcggccaatgctggcagctgttgccaac
gtcagacaagtggagagacagatgaaccaccggagcttcttcattgagaccaagctggac
ggcgagcgcatgcagttgcacaaggacggggacgtgtacaagtattttacgcggaactcc
tacgagtacacgcagcagtttggggccacaccactacagggttctctgacgcccttcatt
cacaatgtcttcaagacaaatgtgaggaactgcatcctggatggtgagatgatggcgtac
aaccacaccgttgacgcctttgtacagaaaggcacaaagtatgacatcaagaagttagcc
gacgattctgaactgcagacctgtttctgtgtctttgacgtcttgctgctcaatgaccag
aagttgggaaatgagactctgaagaagcggaacgaaatgcttcagacggtcttcaccccg
ataaagggccggatacagctggtgcacaaaaccgaagccaaaaccatgcaagaagtagtg
gacgctctcaatgaagcgattgacaacctggaagaaggaatcatggtgaaggatccactg
tccatctacaagccagacaaacgaggtgaggggtggctgaagctgaagccagagtatatg
gacggcctgatggacgaacttgatttgctgatcatcggggggtactggggaaaagggagg
cggggtgggatgatgtctcacttcctgtgtgcagttgctgagactcctgaacctggagag
aagccatcggtgttccattctttttgccgcattggttcaggttacacaatgaaggagctt
tacgacctgggcttgaaactggctaagcactggaaagtctaccgtaagaatgatccccca
gcatcaatcctgtgtaccacagagaaaccagaggtgtacattgacccttgtgattctgtg
atcattcaggttaaagcggccgaaatagttgacagtgacatgtataagacaaattgctca
ctgcgatttcccaggatcgagaggacgagggaagataaggaatggcatcagtgcatgact
ttagcagacctgagtcagtacaggagcaaggcttctgggaagttggcatcgaggcacctt
ttcatcaatgatgatgagccacagaagaagaaacggaagatagtggcaaagcccaagaaa
gccatcgggattattgatcatttcaaggcccaggacctgtctggtgtggccaaagagact
gacatgttcgaggatgtggagttctgtgtaatgaatgggaacgatgagcgctctaaggcc
gatctggagaagggggtggccagctgtgggggcatcgtggtccagaacccaggcaaggac
acctactgcgtgatagctgctgtggagaacatgagggtgaagaacctggttgcctcggac
cagcatgacgtggtgtgggccacctggctgcttgagtgcctggagaggaagcaggttgtt
ccatggcaacctcgtcacatgatccacatgtctccgcccacgaaggaacacttcgccaag
gagtacgaccagttcggggacagctactcggctgaaacggatgagcagcagctgaaagag
gtcttcgggaggatccaggttaaggaggaagatctgccttccatcgcagatgtggaagcc
aggtacggcctggacgacctccccacaagcatgttcagacccttcagagtgtacatggac
agctgctctgacatcagcgaccccaagaccttcatccaatcttcatgcttgctcacgcgg
gcgctggagttccgtttccatgggggggtggtggagcccaaactggtaaaaggggtttct
catgtcattgttgccgaggaaaccagaatcctgcaattaagaactctcagaagaaccttt
accaagaagtttaagattgtgagagaatcatgggtgaaggactctatcaaagcagggcat
ctgttgaatgataatgactatcttgtgtag
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