Conger conger (European conger): 133132642
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Entry
133132642 CDS
T10633
Symbol
smg6
Name
(RefSeq) telomerase-binding protein EST1A
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
ccog Conger conger (European conger)
Pathway
ccog03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133132642 (smg6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccog03019
]
133132642 (smg6)
03032 DNA replication proteins [BR:
ccog03032
]
133132642 (smg6)
Messenger RNA biogenesis [BR:
ccog03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
133132642 (smg6)
mRNA cycle factors
Common to processing body (P body) and stress granule
133132642 (smg6)
DNA replication proteins [BR:
ccog03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
133132642 (smg6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
Motif
Other DBs
NCBI-GeneID:
133132642
NCBI-ProteinID:
XP_061104206
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All DBs
Position
7:complement(31295612..31410687)
Genome browser
AA seq
1290 aa
AA seq
DB search
MEEQEDERERDRERARDTAGVRDRERERGTGRGRGRDGERDRPKERDGDRHRAKNRQGDA
EQGQEARGRPQHGGKASLTSKRYSKSDKRRPRNYSTSSASSGTSMDGPADRVAGGEGAVS
WSRSSGRDRGERRESGGRGHQPQQNRKAARDFSSTDSLEESETGRDRGRRRTMSERDRFG
EEGRSPVRRSGEGQARRGSGQKNAVGGILRVSFDKPSAASHESSEDPHRRGEAAPRGRGR
GILILPAHTNITVAPEPGPRMLFGGARGGGGQGRARGGRGGALRRLWDPNNPDQKPALTR
GQPFQQSPHLQQGGYGQLHFLDTDDEAAGSPPIRQGDPFQNFPASQQAAAMNAAAMAFYK
FQNSDNPYCYPMPSNPSTRYPYPYHVPYQMPSTNGIYTGPGTASYYAGFGQPPGSQSYPP
ASSPLSPEEMEVQARSELGKLLRVADSQELQLSNLLSRDRLSPEGLDRMTHLRAELLALY
ERVILTDIEFSDSQNLDQALWKNVFYQVIERFRQLLKDPAADTAPRIRNMLLTLLDEGAV
FFDALLQKLQTVFQFKLEDYMDGLAIRARPLRKTVKYALISAQRCMICQGDIARYREQAS
DSANYGKARSWYLKAQQIAPKNGRPYNQLALLAVYTKRKLDAVYYYMRSLAASNPILTAK
ESLMSLFEETKRKADQLERRQQREREGGSRGPRSGGARAEEAARVEIWIRPSGPSGTASR
TGSESGRDSEQDGELGALSASDLNKRFILSFLHAHGKLFTKVGMETFPDVAGRVLQEFRA
LLQHSPSPLGSTRMLQIVTINMFAVHNAQSRDGPGEARSVLQEQTTVLGLAMFGLLVRRC
TDLLKHTPTAPPPVEEGEEGEDGEVEEMVRVSAFPADLRELLPSVKVWSDWMLGHPEQWN
PPPCVLPSTAGCSPDVWQCLADLCNALACVYHGEAPLYKADGDEDLRLLLLEEDRLLAGF
VPLLAAPQEPCYRDAGTNTAIAADCKRVTVLKYFLEALCGQEEPLLAFKGGKYVSVATLP
PPGLGTEAGSHQGKQADNQDDYVVVEAESSQSEGDVELEGEVSGSEDDFRELRARRHALT
HELAQQQRRRDKIQAVLQTCRQLELEIRPLFLVPDTNGFIDHLGGLKKLMSCGLYILVVP
LIVITELDGLAKGQDNRGGPGGAGGSSGAHARGVQERAKAAVSFLEQAFEVREPCLRALT
SRGNQLESIAFRSEDTSGQQGNNDDLILSCCLHYCKDKAKDFMPTQRDEPVRLHREVVLL
TDDRNLRVKALTRNVPVRDIPAFLNWAKVG
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacaggaggatgagcgagaaagggacagagagagagcaagggacactgccggg
gtcagagacagagagagggagcgaggcactggcaggggcaggggcagagatggggagaga
gaccggccgaaagaaagggatggggacagacacagagccaagaacaggcaaggagacgca
gagcaaggccaggaggcgagaggcaggccccagcacggaggtaaggccagcctgacttcc
aaacgctattcgaagtctgacaaacgccggccacggaactacagcaccagctccgccagc
agcggcaccagcatggacggccctgcagatcgagtggcagggggggagggtgctgtatcc
tggtcccgatcgtcagggagagacagaggggaacggagggagagcggggggagagggcac
cagccccagcagaacaggaaagcggcgagagacttctcctccacggactctctggaagag
agcgagacgggccgggacagaggcagaaggaggaccatgagcgagagggaccggttcggg
gaggagggcaggagcccggtcaggaggtccggagagggccaggctcgcaggggatctggt
caaaagaacgcggtcggcggaatcctgagggtgtccttcgacaagccttcggccgcctcc
cacgaatcctcagaggacccacacaggagaggggaggcggcccccaggggccggggacgg
ggtatcctcatactccccgcccacacgaacatcaccgtggccccggagcccgggcccagg
atgcttttcggcggagctagggggggaggcggccagggcagggccaggggaggtcgcggg
ggagccctccggagactttgggacccgaacaaccccgatcagaaaccggccttgacgcgg
ggccagcccttccagcagtcgccgcacttgcagcagggaggctacggccagctgcatttc
ctggacacggacgacgaagccgcgggcagtcctcccatccgccagggggaccccttccaa
aacttccctgcttcccagcaagctgccgccatgaacgcggccgccatggccttctacaag
tttcaaaattctgacaacccgtattgctacccaatgccgtctaacccctccactcgctac
ccatacccctaccacgttccctaccagatgcccagcaccaatggcatctacactggccct
ggcacagcctcctactatgctgggtttggccagcctcctgggtcccagagttacccccca
gcctccagcccgctgtccccagaggagatggaggtgcaggccaggagcgagctggggaag
ctgctccgtgtggctgacagtcaggagctgcagctcagcaacctgctctcccgtgatagg
ctgagcccagagggactggacaggatgactcatctcagggctgaactcctggctctgtac
gagcgagtcattctgacggacatcgagttctccgactcccagaacctggaccaggctctg
tggaagaacgtgttctatcaggtcatcgagcgcttccggcagcttctgaaggaccctgcg
gcagacaccgcccccaggatcagaaacatgctgctcacgctgctggacgagggggcagtg
ttcttcgacgcactactgcagaaactacaaactgtgttccagttcaagctggaggactac
atggatggcctggccatacgtgcgcgcccattacgcaagacggtgaagtacgccttgatc
agcgcacagaggtgtatgatctgtcagggcgacatcgccaggtaccgtgagcaggccagc
gactccgccaactacggaaaggcacgcagctggtacctgaaagcgcagcagatagcgccc
aagaacggccggccctacaaccagctagctctgctggcagtgtacacgaaacggaagctg
gatgctgtgtattactacatgcgcagcctggcagccagtaaccccatcctgacagccaag
gagagcctgatgagcctctttgaggagaccaaacgcaaggccgaccagctggagcgccgt
cagcagcgggagcgggagggcgggtcccggggccccaggagcggcggggcccgcgcggag
gaggcggcccgggtggagatctggatccgccccagcgggccctcagggacggcgtcccgc
accgggagcgagtccggccgggactcggagcaggacggggagctgggggctctcagtgcc
agcgacctcaacaagaggtttatcctgagctttctgcacgctcacgggaagctgttcacc
aaagtgggtatggagaccttcccggacgtggcgggccgggtccttcaagagttccgcgcc
ctgctgcagcacagcccctcccccctgggcagcacccgcatgctgcagatcgtcaccatc
aacatgttcgccgtgcacaatgcccagagccgggacggccctggtgaggcacgctccgtg
ctgcaggagcagaccactgttctgggcctggccatgttcggcctgctagtgcggcgctgc
acagatctgctcaaacacacacccacagctcccccgccggtggaggagggcgaggagggg
gaggacggggaggtggaggagatggtgagggtgtctgcgttcccggccgacctccgggag
ctgctgcccagcgtgaaggtgtggtctgactggatgctgggccaccccgagcagtggaac
cccccgccctgcgtcctgccctccactgcaggctgcagtccggacgtgtggcagtgcctg
gcggacctgtgcaacgcgctggcgtgcgtgtaccacggggaggcgccgctgtacaaggcg
gacggggatgaggacctgcggctgctgctgctggaggaggaccggctgctggcgggattc
gtgcccctgctggccgctccgcaggagccctgctacagggacgccggcaccaacactgcc
atcgctgctgactgcaagcgcgtgaccgtgctgaagtacttcctggaggctctgtgtggg
caggaggagccgctgctggccttcaagggtggaaagtatgtgtccgtggccacactcccc
cctcccggcctgggaacggaagccgggagccaccagggaaaacaagcagacaatcaggac
gattatgtcgttgtggaggcggagtcgtcgcagtcggagggcgatgtggagctggagggc
gaggtcagcggcagcgaggacgacttccgggagctgcgggcgcggcgccacgccctgacg
cacgagctggcacagcagcagagacgccgcgacaagatccaggctgtgctgcagacctgc
cgtcagctggagctggagatccggccgctcttcctggtccccgacactaacggcttcatc
gaccacctgggcggcctgaaaaagctcatgtcctgcgggctctacatcctggtggtgcca
ctcatcgtgatcacggagctggacgggctggctaaagggcaggataaccgcgggggtccg
ggcggggccggcggctccagtggagcgcacgcccggggggtgcaggagcgggccaaggct
gcggtcagcttcctggagcaggccttcgaggtgcgggagccctgcctgagagcgctgacc
agccgggggaaccagctggagtccatcgccttccgcagcgaggacacctctggacagcag
gggaacaacgatgacctcatcctgtcctgctgcctgcactactgcaaagacaaggccaag
gacttcatgcccacgcagagggatgagccggtgcgtctgcacagagaggtggtcctgttg
accgacgaccgcaacctgcgggtgaaggccctgacccggaacgtccccgtgcgagatatc
cccgccttcctcaactgggccaaagtgggctga
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