KEGG   Conger conger (European conger): 133132642
Entry
133132642         CDS       T10633                                 
Symbol
smg6
Name
(RefSeq) telomerase-binding protein EST1A
  KO
K11124  protein SMG6 [EC:3.1.-.-]
Organism
ccog  Conger conger (European conger)
Pathway
ccog03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ccog00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    133132642 (smg6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccog03019]
    133132642 (smg6)
   03032 DNA replication proteins [BR:ccog03032]
    133132642 (smg6)
Messenger RNA biogenesis [BR:ccog03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     133132642 (smg6)
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     133132642 (smg6)
DNA replication proteins [BR:ccog03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (animals)
    133132642 (smg6)
SSDB
Motif
Pfam: EST1_DNA_bind PIN_4 EST1
Other DBs
NCBI-GeneID: 133132642
NCBI-ProteinID: XP_061104206
LinkDB
Position
7:complement(31295612..31410687)
AA seq 1290 aa
MEEQEDERERDRERARDTAGVRDRERERGTGRGRGRDGERDRPKERDGDRHRAKNRQGDA
EQGQEARGRPQHGGKASLTSKRYSKSDKRRPRNYSTSSASSGTSMDGPADRVAGGEGAVS
WSRSSGRDRGERRESGGRGHQPQQNRKAARDFSSTDSLEESETGRDRGRRRTMSERDRFG
EEGRSPVRRSGEGQARRGSGQKNAVGGILRVSFDKPSAASHESSEDPHRRGEAAPRGRGR
GILILPAHTNITVAPEPGPRMLFGGARGGGGQGRARGGRGGALRRLWDPNNPDQKPALTR
GQPFQQSPHLQQGGYGQLHFLDTDDEAAGSPPIRQGDPFQNFPASQQAAAMNAAAMAFYK
FQNSDNPYCYPMPSNPSTRYPYPYHVPYQMPSTNGIYTGPGTASYYAGFGQPPGSQSYPP
ASSPLSPEEMEVQARSELGKLLRVADSQELQLSNLLSRDRLSPEGLDRMTHLRAELLALY
ERVILTDIEFSDSQNLDQALWKNVFYQVIERFRQLLKDPAADTAPRIRNMLLTLLDEGAV
FFDALLQKLQTVFQFKLEDYMDGLAIRARPLRKTVKYALISAQRCMICQGDIARYREQAS
DSANYGKARSWYLKAQQIAPKNGRPYNQLALLAVYTKRKLDAVYYYMRSLAASNPILTAK
ESLMSLFEETKRKADQLERRQQREREGGSRGPRSGGARAEEAARVEIWIRPSGPSGTASR
TGSESGRDSEQDGELGALSASDLNKRFILSFLHAHGKLFTKVGMETFPDVAGRVLQEFRA
LLQHSPSPLGSTRMLQIVTINMFAVHNAQSRDGPGEARSVLQEQTTVLGLAMFGLLVRRC
TDLLKHTPTAPPPVEEGEEGEDGEVEEMVRVSAFPADLRELLPSVKVWSDWMLGHPEQWN
PPPCVLPSTAGCSPDVWQCLADLCNALACVYHGEAPLYKADGDEDLRLLLLEEDRLLAGF
VPLLAAPQEPCYRDAGTNTAIAADCKRVTVLKYFLEALCGQEEPLLAFKGGKYVSVATLP
PPGLGTEAGSHQGKQADNQDDYVVVEAESSQSEGDVELEGEVSGSEDDFRELRARRHALT
HELAQQQRRRDKIQAVLQTCRQLELEIRPLFLVPDTNGFIDHLGGLKKLMSCGLYILVVP
LIVITELDGLAKGQDNRGGPGGAGGSSGAHARGVQERAKAAVSFLEQAFEVREPCLRALT
SRGNQLESIAFRSEDTSGQQGNNDDLILSCCLHYCKDKAKDFMPTQRDEPVRLHREVVLL
TDDRNLRVKALTRNVPVRDIPAFLNWAKVG
NT seq 3873 nt   +upstreamnt  +downstreamnt
atggaagaacaggaggatgagcgagaaagggacagagagagagcaagggacactgccggg
gtcagagacagagagagggagcgaggcactggcaggggcaggggcagagatggggagaga
gaccggccgaaagaaagggatggggacagacacagagccaagaacaggcaaggagacgca
gagcaaggccaggaggcgagaggcaggccccagcacggaggtaaggccagcctgacttcc
aaacgctattcgaagtctgacaaacgccggccacggaactacagcaccagctccgccagc
agcggcaccagcatggacggccctgcagatcgagtggcagggggggagggtgctgtatcc
tggtcccgatcgtcagggagagacagaggggaacggagggagagcggggggagagggcac
cagccccagcagaacaggaaagcggcgagagacttctcctccacggactctctggaagag
agcgagacgggccgggacagaggcagaaggaggaccatgagcgagagggaccggttcggg
gaggagggcaggagcccggtcaggaggtccggagagggccaggctcgcaggggatctggt
caaaagaacgcggtcggcggaatcctgagggtgtccttcgacaagccttcggccgcctcc
cacgaatcctcagaggacccacacaggagaggggaggcggcccccaggggccggggacgg
ggtatcctcatactccccgcccacacgaacatcaccgtggccccggagcccgggcccagg
atgcttttcggcggagctagggggggaggcggccagggcagggccaggggaggtcgcggg
ggagccctccggagactttgggacccgaacaaccccgatcagaaaccggccttgacgcgg
ggccagcccttccagcagtcgccgcacttgcagcagggaggctacggccagctgcatttc
ctggacacggacgacgaagccgcgggcagtcctcccatccgccagggggaccccttccaa
aacttccctgcttcccagcaagctgccgccatgaacgcggccgccatggccttctacaag
tttcaaaattctgacaacccgtattgctacccaatgccgtctaacccctccactcgctac
ccatacccctaccacgttccctaccagatgcccagcaccaatggcatctacactggccct
ggcacagcctcctactatgctgggtttggccagcctcctgggtcccagagttacccccca
gcctccagcccgctgtccccagaggagatggaggtgcaggccaggagcgagctggggaag
ctgctccgtgtggctgacagtcaggagctgcagctcagcaacctgctctcccgtgatagg
ctgagcccagagggactggacaggatgactcatctcagggctgaactcctggctctgtac
gagcgagtcattctgacggacatcgagttctccgactcccagaacctggaccaggctctg
tggaagaacgtgttctatcaggtcatcgagcgcttccggcagcttctgaaggaccctgcg
gcagacaccgcccccaggatcagaaacatgctgctcacgctgctggacgagggggcagtg
ttcttcgacgcactactgcagaaactacaaactgtgttccagttcaagctggaggactac
atggatggcctggccatacgtgcgcgcccattacgcaagacggtgaagtacgccttgatc
agcgcacagaggtgtatgatctgtcagggcgacatcgccaggtaccgtgagcaggccagc
gactccgccaactacggaaaggcacgcagctggtacctgaaagcgcagcagatagcgccc
aagaacggccggccctacaaccagctagctctgctggcagtgtacacgaaacggaagctg
gatgctgtgtattactacatgcgcagcctggcagccagtaaccccatcctgacagccaag
gagagcctgatgagcctctttgaggagaccaaacgcaaggccgaccagctggagcgccgt
cagcagcgggagcgggagggcgggtcccggggccccaggagcggcggggcccgcgcggag
gaggcggcccgggtggagatctggatccgccccagcgggccctcagggacggcgtcccgc
accgggagcgagtccggccgggactcggagcaggacggggagctgggggctctcagtgcc
agcgacctcaacaagaggtttatcctgagctttctgcacgctcacgggaagctgttcacc
aaagtgggtatggagaccttcccggacgtggcgggccgggtccttcaagagttccgcgcc
ctgctgcagcacagcccctcccccctgggcagcacccgcatgctgcagatcgtcaccatc
aacatgttcgccgtgcacaatgcccagagccgggacggccctggtgaggcacgctccgtg
ctgcaggagcagaccactgttctgggcctggccatgttcggcctgctagtgcggcgctgc
acagatctgctcaaacacacacccacagctcccccgccggtggaggagggcgaggagggg
gaggacggggaggtggaggagatggtgagggtgtctgcgttcccggccgacctccgggag
ctgctgcccagcgtgaaggtgtggtctgactggatgctgggccaccccgagcagtggaac
cccccgccctgcgtcctgccctccactgcaggctgcagtccggacgtgtggcagtgcctg
gcggacctgtgcaacgcgctggcgtgcgtgtaccacggggaggcgccgctgtacaaggcg
gacggggatgaggacctgcggctgctgctgctggaggaggaccggctgctggcgggattc
gtgcccctgctggccgctccgcaggagccctgctacagggacgccggcaccaacactgcc
atcgctgctgactgcaagcgcgtgaccgtgctgaagtacttcctggaggctctgtgtggg
caggaggagccgctgctggccttcaagggtggaaagtatgtgtccgtggccacactcccc
cctcccggcctgggaacggaagccgggagccaccagggaaaacaagcagacaatcaggac
gattatgtcgttgtggaggcggagtcgtcgcagtcggagggcgatgtggagctggagggc
gaggtcagcggcagcgaggacgacttccgggagctgcgggcgcggcgccacgccctgacg
cacgagctggcacagcagcagagacgccgcgacaagatccaggctgtgctgcagacctgc
cgtcagctggagctggagatccggccgctcttcctggtccccgacactaacggcttcatc
gaccacctgggcggcctgaaaaagctcatgtcctgcgggctctacatcctggtggtgcca
ctcatcgtgatcacggagctggacgggctggctaaagggcaggataaccgcgggggtccg
ggcggggccggcggctccagtggagcgcacgcccggggggtgcaggagcgggccaaggct
gcggtcagcttcctggagcaggccttcgaggtgcgggagccctgcctgagagcgctgacc
agccgggggaaccagctggagtccatcgccttccgcagcgaggacacctctggacagcag
gggaacaacgatgacctcatcctgtcctgctgcctgcactactgcaaagacaaggccaag
gacttcatgcccacgcagagggatgagccggtgcgtctgcacagagaggtggtcctgttg
accgacgaccgcaacctgcgggtgaaggccctgacccggaacgtccccgtgcgagatatc
cccgccttcctcaactgggccaaagtgggctga

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