Conger conger (European conger): 133134433
Help
Entry
133134433 CDS
T10633
Symbol
kdm2ab
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
ccog Conger conger (European conger)
Pathway
ccog03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133134433 (kdm2ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccog03000
]
133134433 (kdm2ab)
04121 Ubiquitin system [BR:
ccog04121
]
133134433 (kdm2ab)
03036 Chromosome and associated proteins [BR:
ccog03036
]
133134433 (kdm2ab)
Enzymes [BR:
ccog01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
133134433 (kdm2ab)
Transcription factors [BR:
ccog03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
133134433 (kdm2ab)
Ubiquitin system [BR:
ccog04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
133134433 (kdm2ab)
Chromosome and associated proteins [BR:
ccog03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
133134433 (kdm2ab)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
133134433 (kdm2ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
LRR_SKP2
F-box
JmjC
PHD
LRR_FBXL15
Cupin_8
RING_Ste5
Motif
Other DBs
NCBI-GeneID:
133134433
NCBI-ProteinID:
XP_061106599
LinkDB
All DBs
Position
8:complement(31438973..31511645)
Genome browser
AA seq
1354 aa
AA seq
DB search
MIKPRLLCLLQPLEAYAIRRRVFPELIRRGNTNFSLIMEDTRPRYSKRLRSGTRRRYQDD
GISDDEIEGKRSFDLDEKLQSDRFNTCLVKRMEGKDFTFEYIQKEGLRAPIVFEKPDGLG
IQMPETDFSVNDVKLFVGSRRVIDVMDVTTQKGIEMSMAQWRRYYETPPAQREKLYNVIS
LEFSHTKLENLVKRPASVDVIDWVDNMWPRHLKERQRDSTNAIIDMQYPKVQKYCLMSVE
GCFTDFHVDFGGTSVWYHVLRGGKVFWIIPPTPQNLELYENWVLSGKQGDIFLGDKATEC
QRIELKQGYTFMIPSGWIHAVYTPVDTLVFGGNFLHSFNIPMQLHINNIEDRTRVPAKFR
YPFYYETCWYVLERYLYCLTNTSHLTPEFQKHSLGIGLKREDVLNHRVKEELSSEEEEEK
PTPTPAPSKPGVKVHLTPFELDGLWNLLGKLESLPSHKKCVPAGIHNAPALLHDIRTLLQ
EHANDDPKLAYTGMPIVRWPKRPPWYQPPPPPLLLQRPRLSGLTHPLPLPRPVKPPSSIS
ALRRRRVRCKRCEACLRTECGDCNYCHDMKKFGGPGRLKKTCVLRQCLAPGLPLSAVCAV
CGEGNQDPDKTPVTLMECSNCAQITHPDCLKVPSEGVVNSDLPSFWECPKCILEKVSTSE
SSSSSDDDSVGSTRAVSLAELPPAKRFHRNDVVGNTGGGVRPSHRGQVVLPLSSVPEPRS
RRMVLPPSHGLLLQQQLQNRRRAGALEVRLRRRIKMEQDRMSPSKRKASSPHPCSPKLRR
QSQDSDGYKGSDRLARGMTGAHPLRGPGRRLHRGGGARGRLLWKGSAYRVGQGGRLAPDS
PLDLSPRLGMGVRNSRKERGRGCLRGRGHSRRQRMVREEEEKADEEEGEEKREEGQRRGW
LDKENRPHRWKGRAKEKETEEQEENGDGGRGQGRTEDDEEAGEDGSEATPEPVLLASDLS
EELVNGTYLTVTLQRPSKAKQDPGTIVPKLEAAVGLRAPPSPPSRKGYLQRTSLQRPKLK
SGVKSVEGGHALSSAHCHPEQRGVFCLDRKKEDCCLPSSASSSSSLTSPTPSFILSLPSL
RDVGNEPGCEKEVWVSVFRYLTRTDLCLCMTVCKSWYKWSCDKRLWTQIDLSRCRSISPQ
ALSGIIKRQPVSLELSWTSISKKQLTWLINRLPGLKDLMVSGCYWSSLSALSSPSCPLLR
TLDLSWAEGVKDVQIRDLLTPPGCDNRSKLRNLQSFRLAGLEISDSTLRLIIRHMPLLAR
LDLAHCRGVTDQSINLLTAVGSSTRNTLTEINLSGCCKLTDTCLLYLRRVSSLSLLDLRD
CKHITRPACESFISELSVNALYCLSEDKLIQRIS
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgataaagccgcggctgctttgtctccttcagccattggaagcgtacgctattcgaagg
cgggtctttcccgaattaattcgccgtgggaataccaatttcagcttgatcatggaagac
acccgtcctcggtacagcaaaagattgcggtcaggcacgcgacggcgttaccaggatgat
ggtatctctgatgacgagattgaagggaagaggagctttgacctagatgagaaactgcaa
agtgaccggttcaacacctgtctggtcaagcgcatggagggaaaagatttcacctttgag
tacattcagaaggaagggctgagggcccccatcgtctttgagaaaccggatggcctgggc
attcagatgcctgaaacagattttagtgtgaatgacgtaaagctgtttgttggtagtcgg
agggtaatagatgtgatggatgtgaccactcaaaaggggatagagatgtcgatggcgcag
tggaggcggtactatgagactccgcctgcccagcgggagaagctctacaatgtcatcagc
ctggagttcagccacaccaagctggagaacctggtcaagaggcctgcttcagtggatgtc
attgactgggtggataacatgtggccacggcacctgaaagagagacagagggactcaacc
aacgccatcattgacatgcagtacccaaaagtacagaagtactgtctgatgagtgtagag
ggctgtttcacagacttccacgttgacttcgggggcacctcagtgtggtaccatgtactg
cgtgggggaaaggtcttctggataatcccgcccacgccccagaatctagagctgtatgag
aactgggtgttgtcagggaaacaaggagacatcttcctcggagacaaggccacagaatgc
cagaggattgagttgaaacaggggtacaccttcatgatcccatcagggtggatccatgct
gtgtacacgcctgtcgacacactggtctttggggggaactttcttcacagcttcaacatc
cctatgcagcttcacatcaacaacattgaggaccgaacacgggtcccagcaaaatttcgc
taccccttctactacgagacgtgctggtatgtgctggagaggtacctgtactgcctgacc
aacacctcacacctcacccccgagttccagaaacactcactgggcataggcctgaagagg
gaagatgttcttaatcaccgtgtgaaggaagagttgtcgtcagaggaggaggaggagaaa
cccacccccacccccgccccctctaagccgggggtcaaagttcacctgactccatttgaa
ctggatgggctgtggaacctgctggggaagctggagtccctcccctcccacaagaagtgt
gtcccagcagggatccataatgctcctgccctgctgcacgacataaggaccctgttgcag
gagcacgccaacgacgaccccaaactcgcctacaccgggatgcctatagtcaggtggcca
aaaaggcccccatggtaccagcccccaccaccacccctcctgctgcagcggcccaggctg
tctggcctgacccaccccctgcccctcccgcggccggttaaacctccgtcttccatttcg
gctctgcggcggaggagggtgcgctgtaagcgctgtgaggcctgtctgcgcactgagtgc
ggcgactgcaactactgccacgacatgaagaagtttggagggcctggccggctcaaaaaa
acctgcgtactgagacagtgcctcgctccagggcttcctctctcagcagtgtgcgctgtt
tgtggagaagggaatcaggatcctgataaaactcccgtcaccctaatggagtgctccaac
tgcgcccagatcacccaccctgactgcctgaaggtgccatcggagggtgtggtgaacagt
gacctgcccagcttctgggagtgtcccaagtgcattttggaaaaagtctccacttcagag
tcctccagcagcagtgatgatgacagcgttggctccacccgtgccgtttccctggctgag
ctccccccagctaagcgcttccacaggaatgatgttgtgggcaacactgggggtggggtc
aggccctcccaccgcggccaggtggttctgcccctctcttcagtgcctgagccgcggtcg
cgtcgtatggtgctccctccctcccacggcctattactgcaacagcagctgcagaacagg
aggcgggcgggggccctggaggtgcgcctcaggaggaggataaaaatggaacaagacaga
atgtccccctcaaagagaaaggcttcctctccacacccctgttctcctaaactccgtcgg
cagagccaggacagcgatggctacaagggcagtgaccgtctggcgcgtggcatgactggg
gcccaccccctgaggggtccagggagacgactgcaccgtgggggtggggccagaggccgg
ttgctctggaagggctctgcctaccgggtggggcaggggggcaggcttgccccagactca
cccctggacctgagccctcggcttgggatgggtgtgaggaacagccggaaagagaggggg
aggggctgtctaagaggacgagggcatagccgacggcaaaggatggtgagggaggaagag
gagaaggcggatgaggaggagggagaggaaaagagggaggagggtcagcggaggggatgg
ctggacaaggagaacaggccacaccgatggaaagggagagcaaaggagaaagagacggaa
gagcaggaagaaaacggtgatggaggtagggggcagggcagaaccgaggacgatgaagaa
gcaggagaggatggcagtgaggcgacgcctgaaccggttcttcttgcgtcggacctgagt
gaggagctggtgaacgggacttacctgacagtgactctccagcgcccctcgaaggccaaa
caggaccctggcactattgtgcccaagctggaggccgccgtgggcctgcgggctcccccg
tccccaccctcaagaaagggctatttacagcgcacatccctacagcggcctaaactcaaa
agcggggtcaaatctgtggagggaggccacgccctcagctctgcccactgtcacccggaa
caacggggggtgttctgtctggacaggaaaaaggaggactgctgcctgccctcttctgcc
tcctcttcctcgtctttgacctcacccaccccctctttcatcctctctctcccctcgctc
agggatgtggggaatgagccgggatgtgagaaggaggtgtgggtgtctgttttccggtac
ctgacgcgtaccgatctgtgtctctgcatgaccgtctgcaagagctggtacaaatggagc
tgtgataagcgtctgtggacacagattgatctgagtcgctgccgctccatcagccctcag
gccctgtcagggatcatcaaacgccagcccgtctccctggagctgtcctggacctccatc
tccaagaaacagctcacctggctcataaaccgtctcccaggtcttaaggacctcatggtt
tcggggtgctactggtcctcgctttcagccctcagttcacccagctgtcccctcctgcgg
accctggacctgagctgggccgagggggtcaaggatgtgcaaatccgggacctgctgacc
cctccaggctgtgataaccgcagcaagctcaggaacctgcagtcattccggctggcggga
ctagagatcagcgactccactctgagactcatcatcagacacatgcccctgctggcgcgg
ctggacctggcgcactgccgcggcgtcacagaccagtccatcaacctgctgaccgctgtg
ggctcctccacccgcaatacactcactgagatcaacctgagtggatgctgtaagctgacg
gacacctgcctgttgtacctgcgccgtgtctccagcctctccctgctggacctgcgggac
tgcaagcacataacacgcccggcctgcgaaagcttcatctctgaactgtccgtcaatgcc
ctctactgcctctctgaggacaagctcatccagaggatatcgtaa
DBGET
integrated database retrieval system
