Conger conger (European conger): 133134433
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Entry
133134433 CDS
T10633
Symbol
kdm2ab
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
ccog Conger conger (European conger)
Pathway
ccog03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133134433 (kdm2ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccog03000
]
133134433 (kdm2ab)
04121 Ubiquitin system [BR:
ccog04121
]
133134433 (kdm2ab)
03036 Chromosome and associated proteins [BR:
ccog03036
]
133134433 (kdm2ab)
Enzymes [BR:
ccog01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
133134433 (kdm2ab)
Transcription factors [BR:
ccog03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
133134433 (kdm2ab)
Ubiquitin system [BR:
ccog04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
133134433 (kdm2ab)
Chromosome and associated proteins [BR:
ccog03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
133134433 (kdm2ab)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
133134433 (kdm2ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
PHD
Cupin_8
Motif
Other DBs
NCBI-GeneID:
133134433
NCBI-ProteinID:
XP_061106599
LinkDB
All DBs
Position
8:complement(31438973..31511645)
Genome browser
AA seq
1354 aa
AA seq
DB search
MIKPRLLCLLQPLEAYAIRRRVFPELIRRGNTNFSLIMEDTRPRYSKRLRSGTRRRYQDD
GISDDEIEGKRSFDLDEKLQSDRFNTCLVKRMEGKDFTFEYIQKEGLRAPIVFEKPDGLG
IQMPETDFSVNDVKLFVGSRRVIDVMDVTTQKGIEMSMAQWRRYYETPPAQREKLYNVIS
LEFSHTKLENLVKRPASVDVIDWVDNMWPRHLKERQRDSTNAIIDMQYPKVQKYCLMSVE
GCFTDFHVDFGGTSVWYHVLRGGKVFWIIPPTPQNLELYENWVLSGKQGDIFLGDKATEC
QRIELKQGYTFMIPSGWIHAVYTPVDTLVFGGNFLHSFNIPMQLHINNIEDRTRVPAKFR
YPFYYETCWYVLERYLYCLTNTSHLTPEFQKHSLGIGLKREDVLNHRVKEELSSEEEEEK
PTPTPAPSKPGVKVHLTPFELDGLWNLLGKLESLPSHKKCVPAGIHNAPALLHDIRTLLQ
EHANDDPKLAYTGMPIVRWPKRPPWYQPPPPPLLLQRPRLSGLTHPLPLPRPVKPPSSIS
ALRRRRVRCKRCEACLRTECGDCNYCHDMKKFGGPGRLKKTCVLRQCLAPGLPLSAVCAV
CGEGNQDPDKTPVTLMECSNCAQITHPDCLKVPSEGVVNSDLPSFWECPKCILEKVSTSE
SSSSSDDDSVGSTRAVSLAELPPAKRFHRNDVVGNTGGGVRPSHRGQVVLPLSSVPEPRS
RRMVLPPSHGLLLQQQLQNRRRAGALEVRLRRRIKMEQDRMSPSKRKASSPHPCSPKLRR
QSQDSDGYKGSDRLARGMTGAHPLRGPGRRLHRGGGARGRLLWKGSAYRVGQGGRLAPDS
PLDLSPRLGMGVRNSRKERGRGCLRGRGHSRRQRMVREEEEKADEEEGEEKREEGQRRGW
LDKENRPHRWKGRAKEKETEEQEENGDGGRGQGRTEDDEEAGEDGSEATPEPVLLASDLS
EELVNGTYLTVTLQRPSKAKQDPGTIVPKLEAAVGLRAPPSPPSRKGYLQRTSLQRPKLK
SGVKSVEGGHALSSAHCHPEQRGVFCLDRKKEDCCLPSSASSSSSLTSPTPSFILSLPSL
RDVGNEPGCEKEVWVSVFRYLTRTDLCLCMTVCKSWYKWSCDKRLWTQIDLSRCRSISPQ
ALSGIIKRQPVSLELSWTSISKKQLTWLINRLPGLKDLMVSGCYWSSLSALSSPSCPLLR
TLDLSWAEGVKDVQIRDLLTPPGCDNRSKLRNLQSFRLAGLEISDSTLRLIIRHMPLLAR
LDLAHCRGVTDQSINLLTAVGSSTRNTLTEINLSGCCKLTDTCLLYLRRVSSLSLLDLRD
CKHITRPACESFISELSVNALYCLSEDKLIQRIS
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgataaagccgcggctgctttgtctccttcagccattggaagcgtacgctattcgaagg
cgggtctttcccgaattaattcgccgtgggaataccaatttcagcttgatcatggaagac
acccgtcctcggtacagcaaaagattgcggtcaggcacgcgacggcgttaccaggatgat
ggtatctctgatgacgagattgaagggaagaggagctttgacctagatgagaaactgcaa
agtgaccggttcaacacctgtctggtcaagcgcatggagggaaaagatttcacctttgag
tacattcagaaggaagggctgagggcccccatcgtctttgagaaaccggatggcctgggc
attcagatgcctgaaacagattttagtgtgaatgacgtaaagctgtttgttggtagtcgg
agggtaatagatgtgatggatgtgaccactcaaaaggggatagagatgtcgatggcgcag
tggaggcggtactatgagactccgcctgcccagcgggagaagctctacaatgtcatcagc
ctggagttcagccacaccaagctggagaacctggtcaagaggcctgcttcagtggatgtc
attgactgggtggataacatgtggccacggcacctgaaagagagacagagggactcaacc
aacgccatcattgacatgcagtacccaaaagtacagaagtactgtctgatgagtgtagag
ggctgtttcacagacttccacgttgacttcgggggcacctcagtgtggtaccatgtactg
cgtgggggaaaggtcttctggataatcccgcccacgccccagaatctagagctgtatgag
aactgggtgttgtcagggaaacaaggagacatcttcctcggagacaaggccacagaatgc
cagaggattgagttgaaacaggggtacaccttcatgatcccatcagggtggatccatgct
gtgtacacgcctgtcgacacactggtctttggggggaactttcttcacagcttcaacatc
cctatgcagcttcacatcaacaacattgaggaccgaacacgggtcccagcaaaatttcgc
taccccttctactacgagacgtgctggtatgtgctggagaggtacctgtactgcctgacc
aacacctcacacctcacccccgagttccagaaacactcactgggcataggcctgaagagg
gaagatgttcttaatcaccgtgtgaaggaagagttgtcgtcagaggaggaggaggagaaa
cccacccccacccccgccccctctaagccgggggtcaaagttcacctgactccatttgaa
ctggatgggctgtggaacctgctggggaagctggagtccctcccctcccacaagaagtgt
gtcccagcagggatccataatgctcctgccctgctgcacgacataaggaccctgttgcag
gagcacgccaacgacgaccccaaactcgcctacaccgggatgcctatagtcaggtggcca
aaaaggcccccatggtaccagcccccaccaccacccctcctgctgcagcggcccaggctg
tctggcctgacccaccccctgcccctcccgcggccggttaaacctccgtcttccatttcg
gctctgcggcggaggagggtgcgctgtaagcgctgtgaggcctgtctgcgcactgagtgc
ggcgactgcaactactgccacgacatgaagaagtttggagggcctggccggctcaaaaaa
acctgcgtactgagacagtgcctcgctccagggcttcctctctcagcagtgtgcgctgtt
tgtggagaagggaatcaggatcctgataaaactcccgtcaccctaatggagtgctccaac
tgcgcccagatcacccaccctgactgcctgaaggtgccatcggagggtgtggtgaacagt
gacctgcccagcttctgggagtgtcccaagtgcattttggaaaaagtctccacttcagag
tcctccagcagcagtgatgatgacagcgttggctccacccgtgccgtttccctggctgag
ctccccccagctaagcgcttccacaggaatgatgttgtgggcaacactgggggtggggtc
aggccctcccaccgcggccaggtggttctgcccctctcttcagtgcctgagccgcggtcg
cgtcgtatggtgctccctccctcccacggcctattactgcaacagcagctgcagaacagg
aggcgggcgggggccctggaggtgcgcctcaggaggaggataaaaatggaacaagacaga
atgtccccctcaaagagaaaggcttcctctccacacccctgttctcctaaactccgtcgg
cagagccaggacagcgatggctacaagggcagtgaccgtctggcgcgtggcatgactggg
gcccaccccctgaggggtccagggagacgactgcaccgtgggggtggggccagaggccgg
ttgctctggaagggctctgcctaccgggtggggcaggggggcaggcttgccccagactca
cccctggacctgagccctcggcttgggatgggtgtgaggaacagccggaaagagaggggg
aggggctgtctaagaggacgagggcatagccgacggcaaaggatggtgagggaggaagag
gagaaggcggatgaggaggagggagaggaaaagagggaggagggtcagcggaggggatgg
ctggacaaggagaacaggccacaccgatggaaagggagagcaaaggagaaagagacggaa
gagcaggaagaaaacggtgatggaggtagggggcagggcagaaccgaggacgatgaagaa
gcaggagaggatggcagtgaggcgacgcctgaaccggttcttcttgcgtcggacctgagt
gaggagctggtgaacgggacttacctgacagtgactctccagcgcccctcgaaggccaaa
caggaccctggcactattgtgcccaagctggaggccgccgtgggcctgcgggctcccccg
tccccaccctcaagaaagggctatttacagcgcacatccctacagcggcctaaactcaaa
agcggggtcaaatctgtggagggaggccacgccctcagctctgcccactgtcacccggaa
caacggggggtgttctgtctggacaggaaaaaggaggactgctgcctgccctcttctgcc
tcctcttcctcgtctttgacctcacccaccccctctttcatcctctctctcccctcgctc
agggatgtggggaatgagccgggatgtgagaaggaggtgtgggtgtctgttttccggtac
ctgacgcgtaccgatctgtgtctctgcatgaccgtctgcaagagctggtacaaatggagc
tgtgataagcgtctgtggacacagattgatctgagtcgctgccgctccatcagccctcag
gccctgtcagggatcatcaaacgccagcccgtctccctggagctgtcctggacctccatc
tccaagaaacagctcacctggctcataaaccgtctcccaggtcttaaggacctcatggtt
tcggggtgctactggtcctcgctttcagccctcagttcacccagctgtcccctcctgcgg
accctggacctgagctgggccgagggggtcaaggatgtgcaaatccgggacctgctgacc
cctccaggctgtgataaccgcagcaagctcaggaacctgcagtcattccggctggcggga
ctagagatcagcgactccactctgagactcatcatcagacacatgcccctgctggcgcgg
ctggacctggcgcactgccgcggcgtcacagaccagtccatcaacctgctgaccgctgtg
ggctcctccacccgcaatacactcactgagatcaacctgagtggatgctgtaagctgacg
gacacctgcctgttgtacctgcgccgtgtctccagcctctccctgctggacctgcgggac
tgcaagcacataacacgcccggcctgcgaaagcttcatctctgaactgtccgtcaatgcc
ctctactgcctctctgaggacaagctcatccagaggatatcgtaa
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