Conger conger (European conger): 133141840
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Entry
133141840 CDS
T10633
Symbol
kdm2bb
Name
(RefSeq) lysine (K)-specific demethylase 2Bb isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
ccog Conger conger (European conger)
Pathway
ccog03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ccog00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133141840 (kdm2bb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccog03000
]
133141840 (kdm2bb)
04121 Ubiquitin system [BR:
ccog04121
]
133141840 (kdm2bb)
03036 Chromosome and associated proteins [BR:
ccog03036
]
133141840 (kdm2bb)
Enzymes [BR:
ccog01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
133141840 (kdm2bb)
Transcription factors [BR:
ccog03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
133141840 (kdm2bb)
Ubiquitin system [BR:
ccog04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
133141840 (kdm2bb)
Chromosome and associated proteins [BR:
ccog03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
133141840 (kdm2bb)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
133141840 (kdm2bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
JHD
F-box-like
JmjC
Cupin_8
F-box
Motif
Other DBs
NCBI-GeneID:
133141840
NCBI-ProteinID:
XP_061118603
LinkDB
All DBs
Position
12:complement(27558946..27582833)
Genome browser
AA seq
1218 aa
AA seq
DB search
MQIVINECRKGRRHFKRSVCRRMYDENDDLSDVEEIANVRGFNVEEKLVSKTYNSNYVKY
MDGKDFTYEYVQKEALRSPLVFKVKDGLGLRMPDPDFTVSEIKGLVGSRRAVDVMDASTQ
KGSEMSMAQFVRYYETPEEERDKLFNVISLEFSHTKLENLIKRPTVVDLVDWVDNVWPPH
LKESQTEGTNVVAEMKYPKVQKYCLMSVKGCYTDFHIDFGGTSVWYHVHRGGKVFWLIPP
FPHNLVLYQDWVLSGKQSDVFLGDRADSCQRVELKPGYTFFIPSGWIHAVYTPEDTLVFG
GNFLHSFNIPMQLSVHEIENRTKVNAKFRYPFFYEMCWYVLERYVHCLTGRSHLSKDFSR
DPSLKDTEMKVEIEDDSGEMQTQEGLWDPPAQSNNTNLHTSPAPASAPQEFPRTPSPTVD
LSARWTHLTPFELKGLTVLLDKLESLPENKRNVPQGIDQPNSLLQDMRVVLKEHARDDPR
LALTGVPVVCWPKKTLKRLANRPKLKMGGSGAAVRLSGGRSTSGARRRRTRCRKCEACLR
TECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVDEEEDKF
NVMLMECSICNEILHPSCLKVKDAGGVINEELPNCWECPKCNHAGKTGKAMKQKRGPGFK
YASNLPGSLLKEQRPGRDIKEEPDTPPALPSALPRRKGEREDTPKRRPPLLTLEDLPLSR
PDDNPLRKKRKLFCTDLDPPLQRKQRKLDDPPLPQLLRQIKMEEEEQEEEFGRTLEERGA
EHVHKQEEADEDMEGREEEEEKEDMRKAMLLRTAAGEESGQSHPSSPRAGPSGEGGWEAQ
EKGRGRAPRQRRLANKELSKELSKQLNQEIQRTEHSLAQEACPLLKPEPPDEPHLLLLNG
SAPPPHGPAPCCSPPRGLPMERHVIRPPPISPPPDQLTLERGDAHPMRREGWMAVFHHLT
HAELCVCMRVCKTWNRWCCDKRLWSSIDLNRCKSITPLMLSGIIRRQPASLDLSWTNISK
KQLSWLINRLPGLRMLYLAGCSWVAVSALCTSSCPLLRTLDLQWVEGLKDAQMRDLLSPP
TDNRPGQVDSRSKLRNVVDLRLAGLDITDVSLQLIIRYMPLLSRLDLSYCNHISDQSINV
LTAVGTTTRDSLTDVNLSVCNRVTDQSLSFFKRCGSICHIDLRYCKQVTKAGCQQFIAEM
SVSVQFGLLEEKLLQKLC
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgcagatagtaattaatgagtgcaggaaaggaagacgtcatttcaaacgttccgtctgt
aggagaatgtacgacgaaaatgatgatttgtcagatgtggaggaaattgccaatgtcaga
gggtttaacgtagaagaaaagcttgtaagcaagacgtacaattcaaactacgtcaagtat
atggacggaaaagatttcacatatgaatacgtgcagaaggaagcgctcaggagtcccctc
gtcttcaaagtcaaagatggattaggactgagaatgcctgatccggattttaccgtcagt
gaaattaagggactggtcggtagccgtcgggcagtggacgtcatggacgccagtacgcag
aagggctcggagatgagcatggcacagtttgttcgttactacgagacccctgaggaggag
cgggataagctgttcaacgtaatcagcctggagttcagccacacaaagctggagaacctg
ataaaacggcccacagtggtggatctggtggactgggtggataatgtgtggccccctcac
ctgaaggagagccagactgaggggacgaacgtcgtcgctgagatgaagtaccccaaagtg
cagaagtactgtttgatgagcgtgaaaggctgctacacggatttccacatcgacttcgga
ggaacgtctgtctggtaccatgtacacaggggaggaaaggtgttctggctgatcccgccc
ttccctcataacctggtgctgtatcaggactgggttctgtcggggaagcagagcgacgtg
ttcctgggtgacagagctgacagctgccaaagggtggagctcaaaccgggctacaccttc
tttatcccctcaggctggatccacgccgtgtacacgccggaggacacgctggtgttcggg
ggaaacttcctgcacagcttcaacatccccatgcagctgagcgtgcacgagatcgaaaac
cgaaccaaggtcaatgctaagttccgttaccccttcttctatgaaatgtgctggtacgtt
ttggagcggtatgtgcactgcctaactggacgctctcacctgagtaaggacttcagcagg
gacccctccctcaaagacacagagatgaaggtggagattgaggatgactctggtgagatg
cagacacaggagggactctgggaccccccggcccaatccaacaacaccaatctgcacacc
agccccgccccggcttccgccccccaggaatttcccagaacaccctcgcccactgtggac
ctctcggccagatggacccacctgacgccgtttgagctgaaagggctcacggtgctgttg
gacaagctggagtccctccccgaaaacaagaggaatgtcccgcagggcatcgaccagccc
aacagcctgctgcaggacatgagggtggtcctaaaagagcatgcgagagatgacccccgg
ctggctctcaccggtgtccctgtggtgtgctggcccaagaagaccctcaagcgcctggct
aaccggcccaagctgaagatggggggctcgggggcggcggtgcggctgtcgggcgggcgc
tccacgtcgggggcgaggagacgcaggacgcgctgccggaagtgcgaggcgtgtctgcgc
acggagtgcggcgagtgccacttctgcaaggacatgaagaagttcggaggcccgggccgc
atgaagcagtcctgcatcatgaggcagtgcatcgcgccagtgttgccccacacggctgtg
tgcctggtctgtggggaggctgggaaggaggacaccgtggatgaagaggaggataagttc
aacgtcatgctgatggagtgttccatctgcaatgagatcctgcaccccagctgcctgaag
gtgaaggatgctggtggcgtgatcaatgaggaactccccaactgctgggagtgtcctaag
tgtaaccacgcaggaaagacagggaaagccatgaagcagaaacggggccccgggttcaag
tacgcgtccaacctgccgggctccctgctgaaggagcagcggccgggccgggacatcaag
gaggagcccgacacgccccctgccctgccctctgccctgccccgcaggaagggcgagcgc
gaggacacgcccaaacgccgccccccgctcctcaccctggaggacctgcccctgtcccga
cccgatgacaacccactgcgcaagaagaggaagctcttctgcaccgacctggaccccccg
ctgcagaggaagcagaggaagctggatgacccgcccctcccccagctgctgcggcagatc
aagatggaggaggaggagcaggaggaagagtttgggaggacgctggaggagcggggggcg
gagcacgtccacaagcaggaggaggcggacgaggacatggagggacgggaggaagaggag
gagaaggaggacatgaggaaggccatgctgctccggacggccgcgggcgaggagagcggc
cagtcgcatcccagctccccgcgggcggggcccagcggcgagggcggctgggaggcgcag
gagaaggggcggggccgggcgccgcggcagcgacggctggccaataaggagctgagcaag
gagctgagcaagcagctgaaccaggagatccagaggacggagcacagcctggcgcaggag
gcctgtcccctgctcaaacccgagcctccggacgagcctcacctcctcctgctcaacggc
agcgccccgcccccccacggccccgccccctgctgctccccgcccaggggcctgcccatg
gagcgccacgtgatcaggccgccgcccatcagcccgcccccggaccagctgaccctggag
cgcggcgacgcccaccccatgcgcagggagggctggatggccgtgtttcaccacctcaca
cacgccgagctctgcgtctgcatgcgggtctgcaagacctggaaccgctggtgctgtgat
aagaggctgtggtcctccatcgatctgaaccgctgtaaatccatcacgcctctcatgctg
agtgggattatccggagacagccggcctccctggacctgagctggaccaacatctccaag
aagcagctgagctggctcatcaacaggcttccggggttgaggatgctgtacctggcgggg
tgctcctgggtggcggtctcggccctctgcacctccagctgccccctgctccgcaccttg
gacctgcagtgggtggagggcctgaaggacgcccaaatgagggacctgctgtcccctccc
actgacaaccggccaggtcaggtggacagtaggagtaagctgcgtaacgtggtggatctg
cggctggcgggattggacatcacggacgtttccctgcagctgataatccggtacatgccg
ctgctgtcccgcctggacctcagctactgcaaccacatcagcgaccagtccatcaacgtc
cttaccgccgtgggcaccaccacgcgcgactcgctcaccgacgtcaacctgtcagtttgt
aatcgagtcactgaccagtccctgagcttcttcaaacgctgtggcagcatctgccacata
gacctgcgctactgcaagcaggtaaccaaggccggctgccagcagttcattgcggagatg
tctgttagcgtgcagttcggactgctggaggagaagctcctgcagaaactctgctag
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