Clostridium cochlearium: SAMEA4530647_0662
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Entry
SAMEA4530647_0662 CDS
T06756
Symbol
phoP_5
Name
(GenBank) two-component response regulator
KO
K18349
two-component system, OmpR family, response regulator VanR
Organism
ccoh
Clostridium cochlearium
Pathway
ccoh01502
Vancomycin resistance
ccoh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SAMEA4530647_0662 (phoP_5)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SAMEA4530647_0662 (phoP_5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ccoh02022
]
SAMEA4530647_0662 (phoP_5)
01504 Antimicrobial resistance genes [BR:
ccoh01504
]
SAMEA4530647_0662 (phoP_5)
Two-component system [BR:
ccoh02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
SAMEA4530647_0662 (phoP_5)
Antimicrobial resistance genes [BR:
ccoh01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
SAMEA4530647_0662 (phoP_5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
CENP-H
PDE8A_N
cREC_REC
Motif
Other DBs
NCBI-ProteinID:
SNV71117
LinkDB
All DBs
Position
1:649855..650556
Genome browser
AA seq
233 aa
AA seq
DB search
MNKSTIIVVDDEKEIRDLIGIYLENEGYKVIKAENGIKALEILEKEKIDLIILDIMMPDM
DGIEACTKIREEKNMPIIMLSAKTEDMDKIWGLTAGADDYMTKPFNPLELIARVKSQLRR
YKKFNVQNAYINENVIEIDELIINTATHEVKVGEKEVRLTPREFDILELLARNKGIVFSI
EKIYERVWKEEFLKSDNTVMVHIRKLREKVEENPRKPKYVKTVWGVGYKVENL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaaagcactatcattgtagtagatgatgaaaaggaaatacgagatttaataggc
atatatttagaaaatgaagggtataaagtaattaaagcggaaaatggcataaaagctttg
gaaatattagaaaaagaaaaaatagatttaataatattagatataatgatgcctgatatg
gatggtattgaagcatgtactaaaattagagaagaaaaaaacatgcctataataatgtta
tcagctaaaacagaggatatggataaaatatggggacttactgcaggagcagatgattat
atgacaaaaccatttaatcctttagaacttatagccagagtaaaatctcaattaagaaga
tataaaaagtttaatgttcaaaatgcttatattaatgaaaatgtgatagagatagatgag
cttataattaatacagctacacatgaagtaaaagttggggagaaggaagttagacttacc
cctagggaattcgatatattggaattgttggctagaaataaaggtatagtattcagcata
gaaaaaatatatgaaagagtgtggaaggaagagtttttaaaatctgataatacagttatg
gtacacataagaaaactaagagaaaaagtagaagaaaatccaagaaaacctaagtacgta
aaaactgtatggggagtaggctacaaggtagaaaacttgtaa
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