Clostridium cochlearium: SAMEA4530647_0680
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Entry
SAMEA4530647_0680 CDS
T06756
Symbol
patB
Name
(GenBank) aspartate aminotransferase
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
ccoh
Clostridium cochlearium
Pathway
ccoh00270
Cysteine and methionine metabolism
ccoh00450
Selenocompound metabolism
ccoh01100
Metabolic pathways
ccoh01110
Biosynthesis of secondary metabolites
ccoh01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ccoh00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
SAMEA4530647_0680 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SAMEA4530647_0680 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccoh01007
]
SAMEA4530647_0680 (patB)
Enzymes [BR:
ccoh01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
SAMEA4530647_0680 (patB)
Amino acid related enzymes [BR:
ccoh01007
]
Aminotransferase (transaminase)
Class II
SAMEA4530647_0680 (patB)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_3
DUF6005
Pyridoxal_deC
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
SNV71353
LinkDB
All DBs
Position
1:671821..672999
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AA seq
392 aa
AA seq
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MYNFNEIVERKNTSAVKWDKPQILYNRSDIIPMGIADMDFRTAPEIIEAIKNRTEHGVFG
YSYLDEEYYNSLINWLDRIHNFKVEEEWVCTAPTIVAAISWMIQSYTEEGDKIIIQPPVY
HQFKRCIESNNRIIVNNPLKYENNKYFMDFEDLESKIDSKVKMMILCNPHNPGGRVWKQE
ELKKLGDICLKHNILMLSDEIHCDLIFKGYKHIPIINVDKKFEDISLICISPTKTFNLAA
LHVSNVIIPNKDLRDKYLNTVYKNAVEGINVLGIEAMKAAYKHGEGWYRDMLKYVEDNYN
FLCNYIEEKIPQLKVTKSEGTYLAWIDFRGLSMNCEQLREFMINEARVLFDEGYVFGKEG
EGFQRINLACSRTILKEALDRICMAMENVNKL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtataattttaatgaaatagttgaaagaaaaaatacgtcagcggttaaatgggataaa
ccccaaatactatataataggagcgatataattcctatgggaatagctgacatggatttt
agaactgctcctgaaataatagaagcaataaaaaatagaacagaacatggagtctttgga
tattcctatttagatgaagagtattataattccttaataaattggctggatagaatacat
aattttaaagtagaagaggaatgggtatgcactgcacctacaatagttgcagctataagt
tggatgattcaaagctatacagaagaaggagataagataataatacaacctcctgtatat
catcaatttaaaagatgtatagagagtaataatcgtattatagtaaataatcctttaaaa
tatgaaaataataaatattttatggattttgaagacttagaaagtaaaatagattcaaag
gtaaaaatgatgattttatgtaatccacataatccagggggaagagtttggaaacaagag
gagttaaaaaaattaggtgatatatgcctaaagcataatatattaatgttatctgatgaa
atacattgtgatttgatatttaaggggtataaacatatacctataattaatgtagataaa
aaatttgaggacatatctttgatatgtatttcccctacaaaaacttttaatttagcagca
cttcatgtttcaaatgttattattcctaataaagacttaagagataaatatttaaataca
gtatataaaaatgcagtagaaggcataaatgtgcttggaatagaggctatgaaagcagct
tataagcatggagaaggttggtatagagatatgcttaaatatgtagaagataattataat
tttctatgtaattatatagaagaaaaaattccacaattaaaagtaactaaatcagaagga
acttatttagcttggatagattttaggggtttatccatgaattgtgaacagttaagagaa
tttatgataaatgaagcaagagtactttttgatgaaggatatgtatttggaaaagaaggg
gaaggttttcagagaataaatttagcttgttctagaacaattctaaaagaagctttagat
agaatatgtatggctatggaaaatgttaacaaactgtga
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