Campylobacter coli RM5611: YSU_00580
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Entry
YSU_00580 CDS
T03167
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ccoi
Campylobacter coli RM5611
Pathway
ccoi00300
Lysine biosynthesis
ccoi00550
Peptidoglycan biosynthesis
ccoi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccoi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
YSU_00580
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
YSU_00580
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ccoi01011
]
YSU_00580
Enzymes [BR:
ccoi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
YSU_00580
Peptidoglycan biosynthesis and degradation proteins [BR:
ccoi01011
]
Precursor biosynthesis
Amino acid ligase
YSU_00580
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Hydrolase
Flavodoxin_3
HisZ-like
Motif
Other DBs
NCBI-ProteinID:
AHK74400
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Position
complement(122998..124281)
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AA seq
427 aa
AA seq
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MKLKLDQSFITDNTLECEKDCYFLKTAQNMNFASDALEKGAKIIDVEECKKLLKIDENIK
IIGITGTNGKTTTAAAIYSILLDLGFKCGLCGTRGAFINDEQIDEKSLTTSPILKTLEYL
QLATQKKCDFFIMEVSSHALVQNRIEGLKFAAKIFTNITQDHLDFHGNFENYKAAKELFF
TDESLKFINKDTLMIKFNVRNAFTYGIENPSLYQVKAYSLEDGISAIVALKDQSFHIDSP
LLGLFNLYNLLAASACVNELVKPNLKDLEKAISGFGGVCGRVEQVANGVIVDFAHTPDGI
EKVLDTLKNKKLIVVFGAGGDRDKTKRPLMGKIVEHFAKIAIITSDNPRSEEPKDIMNEI
LSGFQNPDKALMIEDRKEAINKALKLKEKDDLVVILGKGDENTQEIKGIKHPFSDKAIVN
EILKNQG
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgaaattaaagcttgatcagtcttttattaccgacaataccttagaatgcgaaaaagat
tgctattttttaaaaactgcacaaaatatgaattttgctagtgatgccttagaaaaaggt
gcaaaaatcattgatgtagaagaatgcaaaaaacttttaaaaatcgatgaaaatatcaaa
atcataggaattacaggaaccaatggcaaaaccaccaccgcagcggctatttattcgatt
ttacttgacttaggttttaaatgtggactttgtggcactcgtggagcttttatcaacgat
gagcaaattgatgaaaagtctttaaccacttcgcctattttaaaaactttagaatactta
caacttgccacacaaaaaaaatgtgatttttttattatggaagttagctcgcatgctttg
gtgcaaaatcgcatcgaaggcttgaaatttgcagccaaaatttttactaacattactcaa
gatcatttggattttcatggcaattttgaaaactataaagcagcaaaagagctctttttt
accgatgagagtttaaaatttatcaacaaagatactttaatgattaaatttaatgtgcgc
aatgcttttacttatggcatagaaaatccttctttgtatcaagttaaagcttattcttta
gaagatggtatcagtgctattgtagcattaaaagatcaaagttttcatattgactcgccc
ctactaggacttttcaatctttataatcttctagccgctagtgcttgtgttaatgaactt
gtaaagccgaatttaaaagacttagaaaaagctatcagtggctttggcggggtttgtggt
agggttgagcaagtggctaatggcgtaatcgtggattttgctcacactcctgatggcatt
gaaaaagtacttgatacactcaaaaataaaaaactcatagtagtttttggagcaggtgga
gatagagataaaaccaaacgacctttaatgggaaaaatcgttgagcattttgcaaaaata
gccattatcacaagtgataacccgcgtagcgaagaacctaaagatatcatgaatgaaatt
ctatcaggctttcaaaaccctgataaagctttgatgatagaagatagaaaagaagctata
aataaagctttaaaacttaaagaaaaagacgatttagtagttattttaggcaagggtgat
gaaaatacccaagaaatcaaagggataaaacacccctttagcgacaaagcgattgtgaat
gaaattttaaaaaatcaaggataa
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