Campylobacter coli RM5611: YSU_07055
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Entry
YSU_07055 CDS
T03167
Name
(GenBank) transporter
KO
K18138
multidrug efflux pump
Organism
ccoi
Campylobacter coli RM5611
Pathway
ccoi01501
beta-Lactam resistance
ccoi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ccoi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
YSU_07055
01503 Cationic antimicrobial peptide (CAMP) resistance
YSU_07055
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccoi02000
]
YSU_07055
01504 Antimicrobial resistance genes [BR:
ccoi01504
]
YSU_07055
Transporters [BR:
ccoi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
YSU_07055
Antimicrobial resistance genes [BR:
ccoi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
YSU_07055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Clc-like
Motif
Other DBs
NCBI-ProteinID:
AHK75594
LinkDB
All DBs
Position
1384485..1387607
Genome browser
AA seq
1040 aa
AA seq
DB search
MFSKFFIERPVFASVVAIIISLAGAIGLTNLPIEQYPSLTPPTVKVSATYTGADAQTIAS
TVASPIEDAINGADNMIYMDSTSSSSGTMSLTVYFDIGTDPDQATIDVNNRISAATAKMP
DAVKKLGVTVRKTSSTTLAAISMYSSDGSMSAVDIYNYITLNVLDELKRVPGVGDANAIG
NRNYSLRIWLKPDLLNKFGATATDVIAAVNDQNAQYATGKIGEEPVTQKSPYVYSITMQG
RLQSPSEFENIILRTNEDGSFLRLKDVADVEIGSQQYSSQGRLNGNDAVPIMINLQSGAN
ALNTAKLVEAKMQELSKNFPKGLTYKIPYDTTKFVIESIKEVVKTFVEALILVIIVMYMF
LKNFRATLIPMIAVPVSLLGTFAGLYVLGFSINLLTLFALILAIGIVVDDAIIVVENIDR
ILHENEQISVKDAAIQAMQEVSSPVISIVLVLCAVFIPVSFISGFVGEIQRQFALTLAIS
VTISGFVALTLTPSLCALFLRRNEGEPFKFVKKFNDFFDWSTSVFSAGVAYILKRTIRFV
LIFCIMLGAIFYLYKAVPSSLVPEEDQGLMIGIINLPSASALHRTISEVDSMSQEILKTN
GVKDAMAMIGFDLFTSSLKENAAAMFIGLKDWKDRNVSADEIAMELNKKFAFDRNASSIF
IGLPPIPGLSITGGFEMYVQNKSGKSYDEIQKDVNKLVAVANQRKELSRVRTTLDTTFPQ
YKLIIDRDKLKHYNLNMQDVFNTMNATIGTYYVNDFSMLGKNFQVNIRAKGDFRNTQDAL
KNIFVRSNDGKMIPLDSFLTLQRSSGPDDVKRFNLFPAAQVQGQPAPGYTSGQAIEAIAQ
VAKETLGDDYSIAWSGSAYQEVSSKGTASYAFALGMIFVFLILAAQYERWLIPLAVVTAV
PFAVFGSFLLVYLRGFTNDIYFQTGLLLLIGLSAKNAILIVEFAMEERFKKGKGVFEAAV
AAAKLRFRPIIMTSLAFTFGVLPMIFATGAGSASRHSLGTGLIGGMIAASTLAIFFVPLF
FYLLENFNEWLDKKRGKVHE
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgttttctaaattttttatcgaaagacctgtttttgcttcagttgttgcaattatcatt
tctttagctggagctataggtcttacaaatttacctatagaacaatatccttctttaacc
cctcctacagttaaagtaagtgcaacttacacaggagctgatgcacaaaccattgcttca
acagttgcaagtcctatcgaagatgcaatcaatggcgcagataatatgatttacatggat
tcaacttcaagttcttcaggaactatgagtttgactgtttattttgatatcggtacagat
cctgatcaagccaccatagatgttaataatagaatttcagccgcaactgcaaaaatgcca
gatgcagttaaaaaacttggagttacagttagaaaaacttcctcaacaacacttgctgca
atttctatgtattcaagtgatggctcaatgagtgcagtagatatatataactatatcact
ttaaatgttttagatgagttaaaaagggttccaggagttggagatgcaaacgctatagga
aatcgtaattattctttaagaatttggctaaaacctgacttattaaacaaatttggtgca
acagctaccgatgttatcgcagccgtcaatgatcaaaatgctcaatacgccacaggtaaa
atcggtgaagaacctgtaactcaaaaatcaccctatgtttattctatcaccatgcaagga
agattgcaaagcccgagtgaatttgaaaatattatcttaagaaccaatgaagacggttct
tttttaagattaaaagatgtagctgatgtggaaataggatcacaacaatacagctcacaa
ggacgattaaatggcaatgatgcagttccaattatgatcaatcttcaatcaggggcaaat
gcactcaatacagcaaaacttgtagaagctaaaatgcaagaactttcaaaaaattttcca
aaaggtttaacatataaaattccttacgatacaacaaaatttgtaatagaatcaatcaaa
gaagttgttaaaacttttgttgaagctctaattttagttatcattgttatgtatatgttc
ttaaagaatttccgtgcaacacttattcctatgatagctgtacctgtttcattgttagga
acttttgctggactttatgttttaggttttagtattaacttgcttacgctttttgcttta
attttagccatagggatcgttgtagatgatgcgattatagttgtagaaaatattgatagg
attttacatgaaaatgagcaaataagcgtaaaagatgctgctatccaagcgatgcaagaa
gtaagttcacctgtaatttcaattgttcttgtgctttgtgctgtttttatacctgtgtct
tttatatcaggttttgttggagaaattcaaagacaatttgctcttaccttagctatatct
gtaaccatatcaggttttgttgctcttaccttaacaccttctttatgtgcactctttttg
cgacgtaatgaaggagagccatttaaatttgtaaagaaatttaatgatttttttgattgg
agtacctctgtatttagcgcaggagtagcatatattctaaaaagaaccattcgttttgtt
ttaattttttgtattatgcttggggcaattttttatctctataaagctgtaccaagctct
ttagttcctgaagaagatcaaggtttgatgattggcattatcaaccttccttcggcttca
gcactccatagaacaatctcggaagttgactctatgagtcaagaaattctaaaaactaat
ggagttaaagatgcaatggctatgataggatttgatctttttacaagttcactcaaagaa
aatgccgctgcaatgtttataggcttgaaagattggaaagatagaaatgtgagtgctgat
gaaatcgccatggagcttaataaaaaatttgcttttgatcgcaatgcttcaagtatattt
ataggcctacctcctatacctggattaagtatcacaggcggttttgaaatgtatgttcaa
aacaaaagcggaaaaagctatgatgaaatacaaaaagatgtaaataaacttgttgctgtg
gccaaccaaagaaaagagctatcaagagtaagaacaacccttgatacaactttccctcaa
tacaagcttataattgatagagataaattaaaacactacaatcttaacatgcaagatgtt
tttaacacgatgaatgcaactataggcacttattatgttaatgatttttctatgctaggt
aaaaattttcaagtcaatattcgcgcaaaaggtgattttagaaatacacaagatgcatta
aaaaatatttttgtaagatcaaatgatggaaaaatgataccacttgattctttcttaact
ttacaaagaagttcagggcctgatgatgtaaaacgattcaaccttttcccagcggcacaa
gttcaaggtcaacccgcaccaggttatacttcaggtcaagctatagaagcgattgctcaa
gtagcaaaagaaactttaggggatgattattccatagcttggagtggatcagcttatcaa
gaagtttctagtaaaggaacagcaagttatgcttttgctttaggtatgatatttgtcttt
ttaattctagctgcccaatatgaaagatggcttatacctttagcagttgtaacagctgta
ccttttgccgtttttggttcgtttttacttgtatacttaagaggatttactaatgatata
tattttcaaacaggacttttgctcttgattggactttcagctaaaaatgctatcttaatc
gtagaatttgcaatggaagagcgctttaaaaaaggcaaaggagtttttgaagcagctgtt
gcagcagcaaaacttcgttttcgtcctatcataatgacttctttggcatttacttttggg
gtcttgccaatgattttcgcaacaggagcaggaagtgcttcaagacactctttaggaaca
gggcttattggtggaatgatagctgcttctactttagctatattctttgtacctttattt
ttctatcttttagaaaatttcaacgaatggctagataagaaaaggggtaaagttcatgaa
taa
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